PDB Chemical Component CXU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CXU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C29 |
CL |
1.772 |
1.736 |
| O1 |
C1 |
1.202 |
1.207 |
| C1 |
C2 |
1.525 |
1.507 |
| C1 |
H1 |
1.080 |
1.080 |
| C3 |
C2 |
1.593 |
1.530 |
| C2 |
N2 |
1.489 |
1.464 |
| C2 |
H2 |
1.100 |
1.091 |
| N2 |
C21 |
1.179 |
1.348 |
| N2 |
HN2 |
1.000 |
0.970 |
| N7 |
C3 |
1.477 |
1.490 |
| S4 |
C3 |
1.804 |
1.842 |
| C3 |
H3 |
1.100 |
1.090 |
| C5 |
S4 |
1.819 |
1.838 |
| C52 |
C5 |
1.551 |
1.531 |
| C51 |
C5 |
1.550 |
1.530 |
| C5 |
C6 |
1.549 |
1.540 |
| C8 |
C6 |
1.514 |
1.507 |
| C6 |
N7 |
1.449 |
1.467 |
| C6 |
H6 |
1.100 |
1.089 |
| N7 |
HN7 |
1.000 |
1.009 |
| O82 |
C8 |
1.240 |
1.208 |
| O81 |
C8 |
1.242 |
1.342 |
| C21 |
C22 |
1.501 |
1.473 |
| C21 |
O21 |
1.253 |
1.216 |
| C26 |
C22 |
1.498 |
1.478 |
| C22 |
C23 |
1.355 |
1.372 |
| C23 |
O24 |
1.314 |
1.335 |
| C23 |
C27 |
1.517 |
1.507 |
| N25 |
O24 |
1.402 |
1.207 |
| C26 |
N25 |
1.316 |
1.308 |
| C28 |
C26 |
1.529 |
1.483 |
| C27 |
H27 |
1.101 |
1.090 |
| C27 |
H27A |
1.100 |
1.090 |
| C27 |
H27B |
1.100 |
1.090 |
| C33 |
C28 |
1.408 |
1.393 |
| C29 |
C28 |
1.441 |
1.395 |
| C30 |
C29 |
1.392 |
1.381 |
| C31 |
C30 |
1.415 |
1.383 |
| C30 |
H30 |
1.080 |
1.080 |
| C31 |
C32 |
1.436 |
1.383 |
| C31 |
H31 |
1.081 |
1.080 |
| C32 |
C33 |
1.419 |
1.380 |
| C32 |
H32 |
1.080 |
1.080 |
| C33 |
H33 |
1.080 |
1.080 |
| C51 |
H51 |
1.100 |
1.090 |
| C51 |
H51A |
1.099 |
1.090 |
| C51 |
H51B |
1.100 |
1.090 |
| C52 |
H52 |
1.100 |
1.090 |
| C52 |
H52A |
1.100 |
1.089 |
| C52 |
H52B |
1.100 |
1.090 |
| O81 |
HO81 |
0.950 |
0.966 |
Bond Angles for CXU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1 |
C1 |
C2 |
121.3 |
120.0 |
| O1 |
C1 |
H1 |
119.3 |
120.0 |
| C2 |
C1 |
H1 |
119.3 |
120.0 |
| C1 |
C2 |
N2 |
112.3 |
109.5 |
| C1 |
C2 |
H2 |
111.8 |
109.5 |
| C3 |
C2 |
H2 |
108.2 |
109.4 |
| N2 |
C2 |
H2 |
102.2 |
109.5 |
| C2 |
N2 |
C21 |
125.0 |
120.0 |
| C2 |
N2 |
HN2 |
117.5 |
120.0 |
| C21 |
N2 |
HN2 |
117.5 |
120.0 |
| N2 |
C21 |
C22 |
119.5 |
120.0 |
| N2 |
C21 |
O21 |
121.9 |
120.0 |
| N7 |
C3 |
H3 |
110.7 |
111.2 |
| S4 |
C3 |
H3 |
110.7 |
111.1 |
| C5 |
C6 |
N7 |
105.6 |
112.9 |
| C5 |
C6 |
H6 |
108.0 |
108.8 |
| C8 |
C6 |
H6 |
102.5 |
108.7 |
| N7 |
C6 |
H6 |
113.8 |
108.8 |
| C6 |
N7 |
HN7 |
108.8 |
111.0 |
| O21 |
C21 |
C22 |
118.6 |
120.0 |
| C21 |
C22 |
C23 |
134.1 |
128.6 |
| C22 |
C23 |
O24 |
118.6 |
106.6 |
| C22 |
C23 |
C27 |
121.2 |
126.7 |
| O24 |
C23 |
C27 |
120.2 |
126.7 |
| C23 |
C27 |
H27 |
109.5 |
109.5 |
| C23 |
C27 |
H27A |
109.5 |
109.5 |
| C23 |
C27 |
H27B |
109.5 |
109.5 |
| H27 |
C27 |
H27A |
109.5 |
109.4 |
| H27 |
C27 |
H27B |
109.4 |
109.4 |
| H27A |
C27 |
H27B |
109.5 |
109.5 |
| C31 |
C30 |
H30 |
120.4 |
119.9 |
| C32 |
C31 |
H31 |
120.0 |
119.8 |
| C31 |
C32 |
C33 |
120.5 |
120.1 |
| C31 |
C32 |
H32 |
119.8 |
119.9 |
| C33 |
C32 |
H32 |
119.8 |
119.9 |
| C32 |
C33 |
H33 |
120.4 |
120.1 |
| H51 |
C51 |
H51A |
109.4 |
109.5 |
| H51 |
C51 |
H51B |
109.5 |
109.5 |
| H51A |
C51 |
H51B |
109.5 |
109.5 |
| H52 |
C52 |
H52A |
109.5 |
109.5 |
| H52 |
C52 |
H52B |
109.5 |
109.5 |
| H52A |
C52 |
H52B |
109.5 |
109.4 |
Torsion Angles for CXU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
O1 |
H1 |
180.0 |
180.3 |
| O1 |
C1 |
C2 |
N2 |
327.2 |
359.7 |
| O1 |
C1 |
C2 |
H2 |
213.0 |
239.7 |
| O1 |
C1 |
C2 |
H1 |
180.0 |
179.7 |
| C3 |
C2 |
C1 |
H2 |
241.8 |
240.1 |
| N2 |
C2 |
C1 |
H2 |
114.2 |
120.0 |
| C1 |
C2 |
N2 |
C21 |
283.7 |
275.0 |
| C1 |
C2 |
N2 |
HN2 |
103.7 |
95.1 |
| O1 |
C1 |
H1 |
C2 |
180.0 |
180.3 |
| H1 |
C1 |
C2 |
N2 |
147.2 |
180.0 |
| H1 |
C1 |
C2 |
H2 |
33.0 |
60.0 |
| C3 |
C2 |
C1 |
H1 |
274.8 |
300.0 |
| C1 |
C2 |
C3 |
H2 |
120.5 |
120.0 |
| N2 |
C2 |
C3 |
H2 |
246.1 |
240.0 |
| C3 |
C2 |
N2 |
C21 |
161.0 |
154.9 |
| C3 |
C2 |
N2 |
HN2 |
340.9 |
335.0 |
| N2 |
C2 |
C1 |
H1 |
147.2 |
180.0 |
| C1 |
C2 |
N2 |
H2 |
240.1 |
240.0 |
| C3 |
C2 |
N2 |
H2 |
117.3 |
120.0 |
| C21 |
N2 |
C2 |
HN2 |
180.0 |
179.9 |
| C2 |
N2 |
C21 |
C22 |
164.7 |
180.0 |
| C2 |
N2 |
C21 |
O21 |
344.9 |
0.1 |
| H2 |
C2 |
C1 |
H1 |
33.0 |
60.0 |
| C1 |
C2 |
H2 |
N2 |
120.3 |
120.0 |
| H2 |
C2 |
N2 |
C21 |
43.7 |
35.0 |
| H2 |
C2 |
N2 |
HN2 |
223.6 |
215.1 |
| C21 |
N2 |
C2 |
H2 |
43.7 |
35.0 |
| C2 |
N2 |
C21 |
HN2 |
180.0 |
180.1 |
| O21 |
C21 |
N2 |
C22 |
180.2 |
180.1 |
| N2 |
C21 |
C22 |
C23 |
200.1 |
270.1 |
| HN2 |
N2 |
C2 |
H2 |
223.6 |
215.1 |
| C2 |
N2 |
HN2 |
C21 |
180.0 |
179.9 |
| HN2 |
N2 |
C21 |
C22 |
344.7 |
359.9 |
| HN2 |
N2 |
C21 |
O21 |
164.9 |
180.0 |
| N7 |
C3 |
C2 |
H2 |
238.5 |
296.5 |
| S4 |
C3 |
N7 |
H3 |
240.3 |
242.0 |
| S4 |
C3 |
C2 |
H2 |
115.3 |
184.9 |
| N7 |
C3 |
S4 |
H3 |
119.6 |
118.0 |
| H3 |
C3 |
C2 |
H2 |
356.9 |
60.8 |
| C5 |
S4 |
C3 |
H3 |
238.7 |
276.6 |
| C52 |
C5 |
C6 |
H6 |
162.0 |
116.8 |
| C51 |
C5 |
C6 |
H6 |
36.0 |
353.8 |
| C8 |
C6 |
C5 |
H6 |
245.5 |
241.7 |
| N7 |
C6 |
C5 |
H6 |
122.1 |
120.8 |
| C5 |
C6 |
N7 |
HN7 |
192.2 |
268.0 |
| C5 |
C6 |
C8 |
H6 |
117.6 |
118.4 |
| N7 |
C6 |
C8 |
H6 |
238.2 |
241.7 |
| C8 |
C6 |
N7 |
HN7 |
65.3 |
147.1 |
| C6 |
N7 |
C3 |
H3 |
148.7 |
75.5 |
| C5 |
C6 |
N7 |
H6 |
241.7 |
239.1 |
| C8 |
C6 |
N7 |
H6 |
114.9 |
118.2 |
| C5 |
C6 |
H6 |
N7 |
116.9 |
123.3 |
| H6 |
C6 |
N7 |
HN7 |
310.5 |
28.9 |
| HN7 |
N7 |
C3 |
H3 |
268.7 |
199.4 |
| HN7 |
N7 |
C6 |
H6 |
310.5 |
28.9 |
| O82 |
C8 |
C6 |
H6 |
323.3 |
141.6 |
| O81 |
C8 |
C6 |
H6 |
142.5 |
321.6 |
| C22 |
C21 |
N2 |
HN2 |
344.7 |
359.9 |
| N2 |
C21 |
C22 |
O21 |
180.2 |
180.1 |
| C21 |
C22 |
C23 |
O24 |
179.9 |
180.0 |
| C21 |
C22 |
C23 |
C27 |
0.4 |
359.9 |
| O21 |
C21 |
N2 |
HN2 |
164.9 |
180.0 |
| N2 |
C21 |
O21 |
C22 |
179.8 |
179.9 |
| O21 |
C21 |
C22 |
C23 |
19.9 |
90.0 |
| C26 |
C22 |
C23 |
C27 |
180.4 |
180.1 |
| O24 |
C23 |
C22 |
C27 |
179.5 |
180.0 |
| C22 |
C23 |
C27 |
H27 |
179.5 |
90.0 |
| C22 |
C23 |
C27 |
H27A |
299.5 |
210.0 |
| C22 |
C23 |
C27 |
H27B |
59.5 |
330.1 |
| C22 |
C23 |
O24 |
C27 |
180.5 |
180.0 |
| O24 |
C23 |
C27 |
H27 |
360.0 |
270.0 |
| O24 |
C23 |
C27 |
H27A |
120.0 |
29.9 |
| O24 |
C23 |
C27 |
H27B |
240.0 |
150.0 |
| C22 |
C23 |
C27 |
O24 |
179.5 |
180.1 |
| H27 |
C27 |
C23 |
H27A |
240.0 |
240.0 |
| H27 |
C27 |
C23 |
H27B |
120.0 |
119.9 |
| H27A |
C27 |
C23 |
H27B |
240.0 |
239.9 |
| N25 |
O24 |
C23 |
C27 |
180.0 |
180.1 |
| C23 |
C27 |
H27 |
H27A |
120.0 |
120.0 |
| C23 |
C27 |
H27 |
H27B |
240.0 |
240.0 |
| H27A |
C27 |
H27 |
H27B |
120.0 |
120.0 |
| C23 |
C27 |
H27A |
H27 |
240.0 |
240.0 |
| C23 |
C27 |
H27A |
H27B |
120.0 |
120.1 |
| H27 |
C27 |
H27A |
H27B |
240.0 |
240.0 |
| C23 |
C27 |
H27B |
H27 |
120.0 |
120.0 |
| C23 |
C27 |
H27B |
H27A |
240.0 |
239.9 |
| H27 |
C27 |
H27B |
H27A |
120.0 |
120.0 |
| C32 |
C31 |
C30 |
H30 |
180.6 |
180.0 |
| C33 |
C32 |
C31 |
H32 |
180.0 |
179.8 |
| C31 |
C32 |
C33 |
H33 |
180.2 |
180.0 |
| H31 |
C31 |
C30 |
H30 |
0.6 |
360.0 |
| H31 |
C31 |
C32 |
C33 |
179.4 |
179.8 |
| H31 |
C31 |
C32 |
H32 |
359.4 |
360.0 |
| C33 |
C32 |
C31 |
H31 |
179.4 |
179.8 |
| C31 |
C32 |
C33 |
H32 |
180.0 |
180.2 |
| H32 |
C32 |
C31 |
H31 |
359.4 |
360.0 |
| C31 |
C32 |
H32 |
C33 |
180.0 |
179.8 |
| H32 |
C32 |
C33 |
H33 |
0.2 |
359.8 |
| H33 |
C33 |
C32 |
H32 |
0.2 |
359.8 |
| H51A |
C51 |
H51 |
H51B |
120.0 |
120.0 |
| H51 |
C51 |
H51A |
H51B |
240.0 |
240.0 |
| H51 |
C51 |
H51B |
H51A |
120.0 |
120.1 |
| H52A |
C52 |
H52 |
H52B |
120.0 |
120.0 |
| H52 |
C52 |
H52A |
H52B |
240.0 |
240.0 |
| H52 |
C52 |
H52B |
H52A |
120.0 |
120.0 |