PDB Chemical Component CXF
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CXF
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.582 |
1.530 |
C1 |
C6 |
1.560 |
1.528 |
C1 |
N8 |
1.451 |
1.465 |
C1 |
H1 |
1.116 |
1.090 |
C2 |
C3 |
1.570 |
1.529 |
C2 |
H21 |
1.115 |
1.090 |
C2 |
H22 |
1.114 |
1.089 |
C3 |
C4 |
1.625 |
1.529 |
C3 |
H31 |
1.116 |
1.090 |
C3 |
H32 |
1.115 |
1.090 |
C4 |
C5 |
1.558 |
1.529 |
C4 |
H41 |
1.116 |
1.090 |
C4 |
H42 |
1.115 |
1.090 |
C5 |
C6 |
1.560 |
1.530 |
C5 |
H51 |
1.116 |
1.089 |
C5 |
H52 |
1.115 |
1.090 |
C6 |
H61 |
1.114 |
1.090 |
C6 |
H62 |
1.115 |
1.089 |
N8 |
C7 |
1.347 |
1.348 |
N8 |
HN8 |
1.019 |
0.970 |
C7 |
O9 |
1.194 |
1.211 |
C7 |
H7 |
1.103 |
1.080 |
Bond Angles for CXF
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
106.8 |
109.5 |
C2 |
C1 |
N8 |
109.5 |
109.5 |
C2 |
C1 |
H1 |
110.2 |
109.4 |
C1 |
C2 |
C3 |
109.2 |
109.5 |
C1 |
C2 |
H21 |
112.3 |
109.5 |
C1 |
C2 |
H22 |
112.3 |
109.4 |
C6 |
C1 |
N8 |
106.2 |
109.5 |
C6 |
C1 |
H1 |
113.3 |
109.5 |
C1 |
C6 |
C5 |
110.8 |
109.5 |
C1 |
C6 |
H61 |
111.7 |
109.5 |
C1 |
C6 |
H62 |
111.7 |
109.6 |
N8 |
C1 |
H1 |
110.7 |
109.5 |
C1 |
N8 |
C7 |
134.8 |
120.0 |
C1 |
N8 |
HN8 |
117.7 |
120.0 |
C3 |
C2 |
H21 |
112.3 |
109.5 |
C3 |
C2 |
H22 |
112.3 |
109.5 |
C2 |
C3 |
C4 |
101.7 |
109.5 |
C2 |
C3 |
H31 |
115.2 |
109.5 |
C2 |
C3 |
H32 |
115.2 |
109.5 |
H21 |
C2 |
H22 |
98.1 |
109.4 |
C4 |
C3 |
H31 |
115.2 |
109.4 |
C4 |
C3 |
H32 |
115.2 |
109.5 |
C3 |
C4 |
C5 |
111.2 |
109.5 |
C3 |
C4 |
H41 |
111.6 |
109.5 |
C3 |
C4 |
H42 |
111.6 |
109.5 |
H31 |
C3 |
H32 |
95.2 |
109.4 |
C5 |
C4 |
H41 |
111.6 |
109.5 |
C5 |
C4 |
H42 |
111.6 |
109.5 |
C4 |
C5 |
C6 |
106.1 |
109.5 |
C4 |
C5 |
H51 |
113.4 |
109.4 |
C4 |
C5 |
H52 |
113.5 |
109.5 |
H41 |
C4 |
H42 |
98.8 |
109.4 |
C6 |
C5 |
H51 |
113.5 |
109.4 |
C6 |
C5 |
H52 |
113.5 |
109.5 |
C5 |
C6 |
H61 |
111.7 |
109.4 |
C5 |
C6 |
H62 |
111.7 |
109.4 |
H51 |
C5 |
H52 |
97.0 |
109.4 |
H61 |
C6 |
H62 |
98.7 |
109.4 |
C7 |
N8 |
HN8 |
107.5 |
120.0 |
N8 |
C7 |
O9 |
118.7 |
120.0 |
N8 |
C7 |
H7 |
126.5 |
119.9 |
O9 |
C7 |
H7 |
114.9 |
120.1 |
Torsion Angles for CXF
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
N8 |
245.5 |
239.9 |
C6 |
C1 |
C2 |
H1 |
123.4 |
120.0 |
C2 |
C1 |
C6 |
C5 |
298.1 |
300.1 |
C2 |
C1 |
C6 |
H61 |
63.3 |
60.0 |
C2 |
C1 |
C6 |
H62 |
172.8 |
180.0 |
N8 |
C1 |
C2 |
H1 |
238.0 |
240.1 |
C2 |
C1 |
N8 |
C7 |
130.6 |
150.0 |
C2 |
C1 |
N8 |
HN8 |
310.6 |
329.9 |
C3 |
C2 |
C1 |
H21 |
234.8 |
239.9 |
C3 |
C2 |
C1 |
H22 |
125.3 |
120.0 |
C1 |
C2 |
C3 |
C4 |
293.8 |
300.1 |
C1 |
C2 |
C3 |
H31 |
59.0 |
60.1 |
C1 |
C2 |
C3 |
H32 |
168.5 |
180.0 |
H21 |
C2 |
C1 |
H22 |
250.5 |
240.0 |
C2 |
C1 |
C6 |
N8 |
116.8 |
120.0 |
C2 |
C1 |
C6 |
H1 |
238.5 |
240.0 |
C6 |
C1 |
C2 |
C3 |
66.7 |
59.9 |
C6 |
C1 |
C2 |
H21 |
191.9 |
180.0 |
C6 |
C1 |
C2 |
H22 |
301.3 |
300.0 |
N8 |
C1 |
C6 |
H1 |
121.7 |
120.0 |
C6 |
C1 |
N8 |
C7 |
245.5 |
270.1 |
C6 |
C1 |
N8 |
HN8 |
65.5 |
90.0 |
C4 |
C5 |
C6 |
C1 |
60.4 |
59.9 |
C1 |
C6 |
C5 |
H51 |
295.2 |
300.0 |
C1 |
C6 |
C5 |
H52 |
185.7 |
180.0 |
C5 |
C6 |
C1 |
H61 |
234.7 |
240.1 |
C5 |
C6 |
C1 |
H62 |
125.3 |
120.0 |
H61 |
C6 |
C1 |
H62 |
250.5 |
240.0 |
C2 |
C1 |
N8 |
C6 |
245.1 |
239.9 |
C2 |
C1 |
N8 |
H1 |
121.7 |
119.9 |
N8 |
C1 |
C2 |
C3 |
181.2 |
180.0 |
N8 |
C1 |
C2 |
H21 |
306.4 |
300.1 |
N8 |
C1 |
C2 |
H22 |
55.9 |
60.1 |
C6 |
C1 |
N8 |
H1 |
236.6 |
240.0 |
N8 |
C1 |
C6 |
C5 |
181.3 |
180.0 |
N8 |
C1 |
C6 |
H61 |
306.6 |
299.9 |
N8 |
C1 |
C6 |
H62 |
56.0 |
60.0 |
C7 |
N8 |
C1 |
HN8 |
180.0 |
180.1 |
C1 |
N8 |
C7 |
O9 |
0.0 |
359.9 |
C1 |
N8 |
C7 |
H7 |
180.0 |
180.3 |
C2 |
C1 |
H1 |
C6 |
119.6 |
120.0 |
C2 |
C1 |
H1 |
N8 |
238.7 |
240.1 |
H1 |
C1 |
C2 |
C3 |
303.2 |
300.0 |
H1 |
C1 |
C2 |
H21 |
68.4 |
60.0 |
H1 |
C1 |
C2 |
H22 |
177.9 |
180.0 |
C6 |
C1 |
H1 |
N8 |
119.2 |
120.0 |
H1 |
C1 |
C6 |
C5 |
59.6 |
60.0 |
H1 |
C1 |
C6 |
H61 |
184.8 |
179.9 |
H1 |
C1 |
C6 |
H62 |
294.3 |
300.0 |
H1 |
C1 |
N8 |
C7 |
8.9 |
30.1 |
H1 |
C1 |
N8 |
HN8 |
188.9 |
210.0 |
C3 |
C2 |
C1 |
C6 |
66.7 |
59.9 |
C3 |
C2 |
C1 |
N8 |
181.2 |
180.0 |
C3 |
C2 |
C1 |
H1 |
303.2 |
300.0 |
C1 |
C2 |
C3 |
H21 |
125.2 |
120.0 |
C1 |
C2 |
C3 |
H22 |
234.7 |
240.1 |
H21 |
C2 |
C3 |
H22 |
109.5 |
120.0 |
C4 |
C3 |
C2 |
H31 |
234.7 |
240.0 |
C4 |
C3 |
C2 |
H32 |
125.3 |
120.1 |
C2 |
C3 |
C4 |
C5 |
66.4 |
59.9 |
C2 |
C3 |
C4 |
H41 |
191.6 |
180.1 |
C2 |
C3 |
C4 |
H42 |
301.1 |
300.0 |
H31 |
C3 |
C2 |
H32 |
250.5 |
240.1 |
H21 |
C2 |
C1 |
C6 |
191.9 |
180.0 |
H21 |
C2 |
C1 |
N8 |
306.4 |
300.1 |
H21 |
C2 |
C1 |
H1 |
68.4 |
60.0 |
C1 |
C2 |
H21 |
C3 |
236.5 |
240.0 |
C1 |
C2 |
H21 |
H22 |
118.2 |
119.9 |
C3 |
C2 |
H21 |
H22 |
241.7 |
240.0 |
H21 |
C2 |
C3 |
C4 |
168.5 |
180.0 |
H21 |
C2 |
C3 |
H31 |
293.8 |
300.0 |
H21 |
C2 |
C3 |
H32 |
43.3 |
60.0 |
H22 |
C2 |
C1 |
C6 |
301.3 |
300.0 |
H22 |
C2 |
C1 |
N8 |
55.9 |
60.1 |
H22 |
C2 |
C1 |
H1 |
177.9 |
180.0 |
C1 |
C2 |
H22 |
C3 |
123.6 |
120.0 |
C1 |
C2 |
H22 |
H21 |
241.8 |
240.0 |
C3 |
C2 |
H22 |
H21 |
118.2 |
120.1 |
H22 |
C2 |
C3 |
C4 |
59.1 |
60.0 |
H22 |
C2 |
C3 |
H31 |
184.3 |
180.0 |
H22 |
C2 |
C3 |
H32 |
293.8 |
300.0 |
C4 |
C3 |
C2 |
H21 |
168.5 |
180.0 |
C4 |
C3 |
C2 |
H22 |
59.1 |
60.0 |
C2 |
C3 |
C4 |
H31 |
125.3 |
120.0 |
C2 |
C3 |
C4 |
H32 |
234.7 |
239.9 |
H31 |
C3 |
C4 |
H32 |
109.4 |
119.9 |
C5 |
C4 |
C3 |
H41 |
234.8 |
239.9 |
C5 |
C4 |
C3 |
H42 |
125.3 |
120.0 |
C3 |
C4 |
C5 |
C6 |
296.3 |
300.1 |
C3 |
C4 |
C5 |
H51 |
61.5 |
60.1 |
C3 |
C4 |
C5 |
H52 |
171.0 |
180.0 |
H41 |
C4 |
C3 |
H42 |
250.5 |
240.1 |
H31 |
C3 |
C2 |
H21 |
293.8 |
300.0 |
H31 |
C3 |
C2 |
H22 |
184.3 |
180.0 |
C2 |
C3 |
H31 |
C4 |
242.1 |
240.0 |
C2 |
C3 |
H31 |
H32 |
121.0 |
120.0 |
C4 |
C3 |
H31 |
H32 |
239.0 |
240.1 |
H31 |
C3 |
C4 |
C5 |
301.1 |
299.9 |
H31 |
C3 |
C4 |
H41 |
66.4 |
60.0 |
H31 |
C3 |
C4 |
H42 |
175.9 |
179.9 |
H32 |
C3 |
C2 |
H21 |
43.3 |
60.0 |
H32 |
C3 |
C2 |
H22 |
293.8 |
300.0 |
C2 |
C3 |
H32 |
C4 |
117.9 |
120.1 |
C2 |
C3 |
H32 |
H31 |
238.9 |
240.0 |
C4 |
C3 |
H32 |
H31 |
121.0 |
119.9 |
H32 |
C3 |
C4 |
C5 |
191.7 |
180.0 |
H32 |
C3 |
C4 |
H41 |
316.9 |
300.1 |
H32 |
C3 |
C4 |
H42 |
66.4 |
60.0 |
C1 |
C6 |
C5 |
C4 |
60.4 |
59.9 |
C5 |
C4 |
C3 |
H31 |
301.1 |
299.9 |
C5 |
C4 |
C3 |
H32 |
191.7 |
180.0 |
C3 |
C4 |
C5 |
H41 |
125.2 |
120.1 |
C3 |
C4 |
C5 |
H42 |
234.7 |
240.0 |
H41 |
C4 |
C5 |
H42 |
109.5 |
119.9 |
C6 |
C5 |
C4 |
H51 |
234.7 |
240.0 |
C6 |
C5 |
C4 |
H52 |
125.3 |
120.1 |
C4 |
C5 |
C6 |
H61 |
295.1 |
300.0 |
C4 |
C5 |
C6 |
H62 |
185.7 |
180.1 |
H51 |
C5 |
C4 |
H52 |
250.6 |
240.1 |
H41 |
C4 |
C3 |
H31 |
66.4 |
60.0 |
H41 |
C4 |
C3 |
H32 |
316.9 |
300.1 |
C3 |
C4 |
H41 |
C5 |
235.0 |
239.9 |
C3 |
C4 |
H41 |
H42 |
117.5 |
120.0 |
C5 |
C4 |
H41 |
H42 |
242.5 |
240.0 |
H41 |
C4 |
C5 |
C6 |
171.1 |
180.0 |
H41 |
C4 |
C5 |
H51 |
296.3 |
299.9 |
H41 |
C4 |
C5 |
H52 |
45.7 |
59.9 |
H42 |
C4 |
C3 |
H31 |
175.9 |
179.9 |
H42 |
C4 |
C3 |
H32 |
66.4 |
60.0 |
C3 |
C4 |
H42 |
C5 |
125.0 |
120.0 |
C3 |
C4 |
H42 |
H41 |
242.5 |
240.0 |
C5 |
C4 |
H42 |
H41 |
117.5 |
120.0 |
H42 |
C4 |
C5 |
C6 |
61.5 |
60.1 |
H42 |
C4 |
C5 |
H51 |
186.8 |
180.0 |
H42 |
C4 |
C5 |
H52 |
296.2 |
300.0 |
C5 |
C6 |
C1 |
N8 |
181.3 |
180.0 |
C5 |
C6 |
C1 |
H1 |
59.6 |
60.0 |
C1 |
C6 |
C5 |
H61 |
125.3 |
120.0 |
C1 |
C6 |
C5 |
H62 |
234.7 |
239.9 |
C6 |
C5 |
C4 |
H41 |
171.1 |
180.0 |
C6 |
C5 |
C4 |
H42 |
61.5 |
60.1 |
C4 |
C5 |
C6 |
H51 |
125.2 |
120.0 |
C4 |
C5 |
C6 |
H52 |
234.7 |
239.9 |
H51 |
C5 |
C6 |
H52 |
109.5 |
119.9 |
H61 |
C6 |
C5 |
H62 |
109.5 |
119.9 |
H51 |
C5 |
C4 |
H41 |
296.3 |
299.9 |
H51 |
C5 |
C4 |
H42 |
186.8 |
180.0 |
C4 |
C5 |
H51 |
C6 |
238.8 |
240.0 |
C4 |
C5 |
H51 |
H52 |
119.4 |
120.0 |
C6 |
C5 |
H51 |
H52 |
240.6 |
240.0 |
H51 |
C5 |
C6 |
H61 |
169.9 |
180.0 |
H51 |
C5 |
C6 |
H62 |
60.4 |
60.1 |
H52 |
C5 |
C4 |
H41 |
45.7 |
59.9 |
H52 |
C5 |
C4 |
H42 |
296.2 |
300.0 |
C4 |
C5 |
H52 |
C6 |
121.2 |
120.1 |
C4 |
C5 |
H52 |
H51 |
240.7 |
240.0 |
C6 |
C5 |
H52 |
H51 |
119.4 |
120.0 |
H52 |
C5 |
C6 |
H61 |
60.4 |
60.1 |
H52 |
C5 |
C6 |
H62 |
311.0 |
300.2 |
H61 |
C6 |
C1 |
N8 |
306.6 |
299.9 |
H61 |
C6 |
C1 |
H1 |
184.8 |
179.9 |
C1 |
C6 |
H61 |
C5 |
235.2 |
240.0 |
C1 |
C6 |
H61 |
H62 |
117.6 |
120.1 |
H61 |
C6 |
C5 |
H51 |
169.9 |
180.0 |
H61 |
C6 |
C5 |
H52 |
60.4 |
60.1 |
C5 |
C6 |
H61 |
H62 |
242.4 |
240.1 |
H62 |
C6 |
C1 |
N8 |
56.0 |
60.0 |
H62 |
C6 |
C1 |
H1 |
294.3 |
300.0 |
C1 |
C6 |
H62 |
C5 |
124.8 |
120.1 |
C1 |
C6 |
H62 |
H61 |
242.4 |
239.9 |
H62 |
C6 |
C5 |
H51 |
60.4 |
60.1 |
H62 |
C6 |
C5 |
H52 |
311.0 |
300.2 |
C5 |
C6 |
H62 |
H61 |
117.6 |
119.9 |
C7 |
N8 |
C1 |
H1 |
8.9 |
30.1 |
C1 |
N8 |
C7 |
HN8 |
180.0 |
179.9 |
O9 |
C7 |
N8 |
H7 |
180.0 |
179.7 |
HN8 |
N8 |
C1 |
H1 |
188.9 |
210.0 |
C1 |
N8 |
HN8 |
C7 |
180.0 |
180.1 |
HN8 |
N8 |
C7 |
O9 |
180.0 |
180.0 |
HN8 |
N8 |
C7 |
H7 |
0.0 |
0.4 |
O9 |
C7 |
N8 |
HN8 |
180.0 |
180.0 |
N8 |
C7 |
O9 |
H7 |
180.0 |
180.3 |
H7 |
C7 |
N8 |
HN8 |
0.0 |
0.4 |
N8 |
C7 |
H7 |
O9 |
180.0 |
179.7 |