PDB Chemical Component CXD

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CXD

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
F01	C02	1.348	1.351
C02	C03	1.392	1.384
C02	C18	1.388	1.389
C03	C04	1.523	1.507
C03	C14	1.405	1.383
C04	N05	1.469	1.465
N05	C06	1.390	1.348
C06	O07	1.228	1.217
C06	C08	1.468	1.466
C08	N09	1.398	1.383
C08	C12	1.383	1.368
N09	C10	1.350	1.345
C10	N11	1.320	1.308
N11	C12	1.364	1.334
C12	CL1	1.737	1.736
C14	C15	1.399	1.384
C15	C16	1.396	1.382
C16	CL2	1.734	1.736
C16	C18	1.381	1.388
C18	O19	1.370	1.360
O19	C20	1.379	1.359
C20	C21	1.407	1.389
C20	C28	1.388	1.385
C21	C22	1.397	1.384
C22	CL3	1.753	1.737
C22	C24	1.389	1.381
C24	C25	1.405	1.396
C25	C28	1.400	1.396
C25	C26	1.430	1.432
C26	N27	1.156	1.135
C04	H041	1.100	1.090
C04	H042	1.100	1.090
C14	H14	1.080	1.080
N05	H05	1.000	0.970
N09	H09	1.000	0.970
C10	H10	1.080	1.080
C15	H15	1.080	1.080
C21	H21	1.080	1.079
C28	H28	1.080	1.081
C24	H24	1.080	1.080

Bond Angles for CXD

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
F01	C02	C03	120.8	120.1
F01	C02	C18	116.4	120.0
C03	C02	C18	122.8	119.9
C02	C03	C04	119.5	120.0
C02	C03	C14	116.7	120.1
C02	C18	C16	119.1	119.9
C02	C18	O19	122.2	120.1
C04	C03	C14	123.6	120.0
C03	C04	N05	101.7	109.5
C03	C04	H041	111.4	109.5
C03	C04	H042	111.4	109.5
C03	C14	C15	121.8	120.1
C03	C14	H14	119.1	120.0
C04	N05	C06	121.2	120.0
N05	C04	H041	111.4	109.5
N05	C04	H042	111.4	109.5
C04	N05	H05	119.4	120.0
N05	C06	O07	123.3	120.0
N05	C06	C08	115.5	120.0
C06	N05	H05	119.4	120.0
O07	C06	C08	121.2	120.0
C06	C08	N09	123.3	126.9
C06	C08	C12	132.4	126.8
N09	C08	C12	104.1	106.3
C08	N09	C10	107.7	107.0
C08	N09	H09	126.1	126.5
C08	C12	N11	110.5	107.7
C08	C12	CL1	127.8	126.1
N09	C10	N11	111.3	109.2
C10	N09	H09	126.1	126.5
N09	C10	H10	124.3	125.4
C10	N11	C12	106.2	109.7
N11	C10	H10	124.4	125.4
N11	C12	CL1	121.6	126.1
C14	C15	C16	118.8	120.1
C15	C14	H14	119.1	119.9
C14	C15	H15	120.6	119.9
C15	C16	CL2	123.6	120.0
C15	C16	C18	120.8	120.0
C16	C15	H15	120.6	120.0
CL2	C16	C18	115.6	120.0
C16	C18	O19	118.7	120.1
C18	O19	C20	123.9	118.0
O19	C20	C21	118.1	120.0
O19	C20	C28	120.5	120.0
C21	C20	C28	121.4	120.1
C20	C21	C22	118.5	120.2
C20	C21	H21	120.7	119.9
C20	C28	C25	118.5	119.8
C20	C28	H28	120.8	120.1
C21	C22	CL3	120.2	119.9
C21	C22	C24	121.7	120.2
C22	C21	H21	120.8	119.9
CL3	C22	C24	118.1	119.9
C22	C24	C25	118.2	120.0
C22	C24	H24	120.9	120.0
C24	C25	C28	121.7	119.8
C24	C25	C26	119.6	120.1
C25	C24	H24	120.9	120.0
C28	C25	C26	118.7	120.1
C25	C28	H28	120.8	120.1
C25	C26	N27	178.4	179.9
H041	C04	H042	109.5	109.4

Torsion Angles for CXD

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C03	C02	F01	C18	181.3	180.2
F01	C02	C03	C04	356.4	0.0
F01	C02	C03	C14	181.0	180.0
F01	C02	C18	C16	179.9	179.7
F01	C02	C18	O19	359.6	0.0
F01	C02	C03	C18	178.7	179.8
C03	C02	C18	C16	358.7	359.5
C03	C02	C18	O19	178.3	179.8
C04	C03	C02	C14	175.4	180.1
C02	C03	C04	N05	292.0	79.9
C02	C03	C04	H041	50.8	200.0
C02	C03	C04	H042	173.3	320.0
C02	C03	C14	C15	357.6	0.1
C02	C03	C14	H14	177.6	180.1
F01	C02	C18	C03	181.3	180.2
C18	C02	C03	C04	177.7	180.3
C18	C02	C03	C14	2.3	0.2
C15	C16	C18	C02	0.4	0.5
CL2	C16	C18	C02	179.8	180.3
C16	C18	C02	O19	180.4	179.7
C02	C18	O19	C20	301.4	90.0
C04	C03	C02	C18	177.7	180.3
C02	C03	C04	C14	184.9	179.9
C04	C03	C14	C15	182.4	180.0
C04	C03	C14	H14	2.4	0.0
C03	C04	N05	C06	285.1	180.0
N05	C04	C03	H041	241.2	239.9
N05	C04	C03	H042	118.7	120.0
C03	C04	N05	H05	105.1	0.0
H041	C04	C03	H042	237.5	240.0
C14	C03	C02	C18	2.3	0.2
C02	C03	C14	C04	175.2	180.1
C14	C03	C04	N05	107.1	260.0
C14	C03	C04	H041	225.8	20.1
C14	C03	C04	H042	348.3	140.0
C03	C14	C15	C16	1.6	360.0
C15	C14	C03	H14	180.0	180.0
C03	C14	C15	H15	181.6	180.0
N05	C04	C03	C14	107.1	260.0
C03	C04	N05	H041	118.7	120.0
C03	C04	N05	H042	241.3	240.0
C04	N05	C06	O07	356.6	0.1
C04	N05	C06	C08	175.3	180.0
C06	N05	C04	H05	180.0	180.0
H041	C04	N05	H042	122.5	120.0
C06	N05	C04	H041	166.4	59.9
C06	N05	C04	H042	43.9	300.0
C04	N05	C06	H05	180.0	180.0
O07	C06	N05	C08	181.3	180.1
N05	C06	C08	N09	177.5	0.1
N05	C06	C08	C12	352.3	179.7
N05	C06	O07	C08	178.6	179.9
O07	C06	N05	H05	176.6	180.1
O07	C06	C08	N09	356.3	180.0
O07	C06	C08	C12	171.1	359.6
N05	C06	C08	O07	181.3	180.1
C08	C06	N05	H05	355.3	360.0
N09	C08	C06	C12	185.2	180.4
C06	C08	N09	C10	177.8	180.0
C06	C08	N09	H09	357.8	359.8
C06	C08	C12	N11	182.6	179.9
C06	C08	C12	CL1	4.6	0.0
C06	C08	N09	C12	176.1	179.7
N09	C08	C12	N11	358.1	359.6
N09	C08	C12	CL1	180.1	179.7
C08	N09	C10	N11	359.0	359.9
C10	N09	C08	H09	180.0	180.1
C08	N09	C10	H10	179.0	180.0
C06	C08	C12	N09	184.5	180.3
C12	C08	N09	C10	1.7	0.3
C12	C08	N09	H09	181.7	180.2
C10	N11	C12	C08	1.4	0.4
N11	C12	C08	CL1	178.0	179.9
C10	N09	C08	C12	1.7	0.3
C08	N09	C10	H09	180.0	179.9
N09	C10	N11	C12	359.8	359.8
N11	C10	N09	H10	180.0	179.9
C08	C12	N11	C10	1.4	0.4
N11	C10	N09	H09	179.0	180.1
N09	C10	N11	H10	180.0	180.1
C10	N11	C12	CL1	179.5	180.2
C08	C12	N11	CL1	181.9	180.1
C12	N11	C10	H10	179.8	179.7
C08	C12	CL1	N11	177.8	179.9
C03	C14	C15	H14	180.0	180.0
C14	C15	C16	CL2	180.1	180.0
C14	C15	C16	C18	359.5	359.7
C16	C15	C14	H15	180.0	180.0
C02	C18	C16	C15	0.4	0.5
C16	C15	C14	H14	181.6	179.9
C14	C15	C16	H15	180.0	180.0
CL2	C16	C15	C18	180.6	180.3
C15	C16	C18	O19	180.8	180.2
C02	C18	C16	CL2	179.8	180.3
C15	C16	CL2	C18	179.4	179.7
CL2	C16	C15	H15	0.1	360.0
CL2	C16	C18	O19	0.2	360.0
C02	C18	C16	O19	179.7	180.3
C15	C16	C18	CL2	180.6	180.3
C18	C16	C15	H15	179.5	179.7
C16	C18	O19	C20	121.0	270.3
C02	C18	O19	C16	180.3	179.7
C18	O19	C20	C21	315.6	360.0
C18	O19	C20	C28	136.5	179.8
C21	C20	O19	C28	179.1	180.2
O19	C20	C21	C22	180.6	180.0
O19	C20	C21	H21	0.6	0.0
O19	C20	C28	C25	179.3	179.8
O19	C20	C28	H28	359.3	359.9
O19	C20	C21	C28	180.9	179.8
C21	C20	C28	C25	0.3	359.5
C21	C20	C28	H28	180.2	179.7
C20	C21	C22	CL3	180.7	180.0
C20	C21	C22	C24	0.2	360.0
C22	C21	C20	H21	180.0	180.0
O19	C20	C28	C21	179.1	180.2
C28	C20	C21	C22	359.7	0.3
C28	C20	C21	H21	179.6	180.3
C24	C25	C28	C20	359.9	0.4
C20	C28	C25	C26	179.9	180.2
C25	C28	C20	H28	180.0	179.8
C22	C21	C20	C28	359.7	0.3
C20	C21	C22	H21	180.0	180.0
CL3	C22	C21	C24	180.4	180.0
C21	C22	C24	C25	359.9	360.0
C21	C22	C24	H24	179.9	180.0
C21	C22	CL3	C24	179.6	180.0
CL3	C22	C21	H21	0.7	360.0
CL3	C22	C24	C25	179.5	180.0
CL3	C22	C24	H24	359.5	0.0
C21	C22	C24	CL3	180.4	180.0
C24	C22	C21	H21	180.3	180.0
C22	C24	C25	C28	0.0	359.8
C22	C24	C25	C26	180.0	180.0
C25	C24	C22	H24	180.0	180.0
C20	C28	C25	C24	359.9	0.4
C22	C24	C25	H24	180.0	180.0
C28	C25	C24	C26	180.0	179.8
C24	C25	C28	H28	179.9	180.2
C24	C25	C26	N27	187.9	158.1
C20	C28	C25	H28	180.0	180.2
C24	C25	C28	C26	180.0	180.2
C28	C25	C24	H24	180.1	179.8
C28	C25	C26	N27	7.9	338.3
C24	C25	C26	C28	180.0	179.8
C26	C25	C24	H24	0.0	359.9
C26	C25	C28	H28	359.9	0.1
H041	C04	C03	C14	225.8	20.1
C03	C04	H041	N05	247.2	240.0
C03	C04	H041	H042	123.6	120.0
H041	C04	N05	C06	166.4	59.9
N05	C04	H041	H042	236.4	240.0
H041	C04	N05	H05	346.4	240.0
H042	C04	C03	C14	348.3	140.0
C03	C04	H042	N05	112.8	120.0
C03	C04	H042	H041	236.4	240.0
H042	C04	N05	C06	43.9	300.0
N05	C04	H042	H041	123.6	120.0
H042	C04	N05	H05	223.8	120.0
C03	C14	H14	C15	180.0	180.0
H14	C14	C15	C16	181.6	179.9
H14	C14	C15	H15	1.6	360.0
C04	N05	H05	C06	180.0	180.0
H05	N05	C04	H041	346.4	240.0
H05	N05	C04	H042	223.8	120.0
H05	N05	C06	O07	176.6	180.1
H05	N05	C06	C08	355.3	360.0
H09	N09	C08	C12	181.7	180.2
C08	N09	H09	C10	180.0	180.2
H09	N09	C10	N11	179.0	180.1
H09	N09	C10	H10	359.0	0.2
N09	C10	H10	N11	180.0	179.9
H10	C10	N09	H09	359.0	0.2
H10	C10	N11	C12	179.8	179.7
C14	C15	H15	C16	180.0	180.0
H15	C15	C14	H14	1.6	360.0
H15	C15	C16	CL2	0.1	360.0
H15	C15	C16	C18	179.5	179.7
H21	C21	C20	C28	179.6	180.3
C20	C21	H21	C22	180.0	180.0
H21	C21	C22	CL3	0.7	360.0
H21	C21	C22	C24	180.3	180.0
C20	C28	H28	C25	180.0	179.8
H28	C28	C25	C26	359.9	0.1
C22	C24	H24	C25	180.0	180.0
H24	C24	C25	C28	180.1	179.8
H24	C24	C25	C26	0.0	359.9