PDB Chemical Component CXA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CXA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.426 |
1.383 |
C1 |
C6 |
1.418 |
1.382 |
C1 |
C12 |
1.525 |
1.507 |
C2 |
C3 |
1.423 |
1.382 |
C2 |
HC2 |
1.103 |
1.079 |
C3 |
C4 |
1.416 |
1.381 |
C3 |
HC3 |
1.103 |
1.080 |
C4 |
C5 |
1.407 |
1.382 |
C4 |
HC4 |
1.103 |
1.080 |
C5 |
C6 |
1.412 |
1.382 |
C5 |
HC5 |
1.103 |
1.080 |
C6 |
HC6 |
1.103 |
1.080 |
C12 |
C13 |
1.590 |
1.528 |
C12 |
H121 |
1.115 |
1.089 |
C12 |
H122 |
1.114 |
1.090 |
C13 |
C14 |
1.557 |
1.507 |
C13 |
N17 |
1.500 |
1.464 |
C13 |
HC13 |
1.116 |
1.090 |
C14 |
O15 |
1.348 |
1.342 |
C14 |
O16 |
1.192 |
1.208 |
O15 |
HO15 |
0.950 |
0.968 |
N17 |
S18 |
1.751 |
1.655 |
N17 |
HN17 |
1.020 |
0.970 |
S18 |
N19 |
1.699 |
1.655 |
S18 |
O20 |
1.432 |
1.420 |
S18 |
O21 |
1.432 |
1.420 |
N19 |
H191 |
1.020 |
0.970 |
N19 |
H192 |
1.020 |
0.970 |
Bond Angles for CXA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
117.8 |
120.0 |
C2 |
C1 |
C12 |
121.8 |
120.0 |
C1 |
C2 |
C3 |
120.7 |
120.0 |
C1 |
C2 |
HC2 |
119.8 |
120.0 |
C6 |
C1 |
C12 |
120.5 |
120.0 |
C1 |
C6 |
C5 |
121.8 |
120.0 |
C1 |
C6 |
HC6 |
119.4 |
120.0 |
C1 |
C12 |
C13 |
116.8 |
109.5 |
C1 |
C12 |
H121 |
109.6 |
109.4 |
C1 |
C12 |
H122 |
109.6 |
109.4 |
C3 |
C2 |
HC2 |
119.6 |
120.1 |
C2 |
C3 |
C4 |
120.2 |
120.1 |
C2 |
C3 |
HC3 |
120.1 |
120.0 |
C4 |
C3 |
HC3 |
119.6 |
119.9 |
C3 |
C4 |
C5 |
119.6 |
120.0 |
C3 |
C4 |
HC4 |
120.5 |
120.0 |
C5 |
C4 |
HC4 |
119.9 |
120.0 |
C4 |
C5 |
C6 |
120.0 |
120.0 |
C4 |
C5 |
HC5 |
119.8 |
120.0 |
C6 |
C5 |
HC5 |
120.1 |
119.9 |
C5 |
C6 |
HC6 |
118.9 |
120.0 |
C13 |
C12 |
H121 |
109.5 |
109.5 |
C13 |
C12 |
H122 |
109.6 |
109.5 |
C12 |
C13 |
C14 |
109.8 |
109.5 |
C12 |
C13 |
N17 |
115.6 |
109.5 |
C12 |
C13 |
HC13 |
103.8 |
109.5 |
H121 |
C12 |
H122 |
100.6 |
109.4 |
C14 |
C13 |
N17 |
105.5 |
109.5 |
C14 |
C13 |
HC13 |
114.2 |
109.4 |
C13 |
C14 |
O15 |
113.6 |
120.0 |
C13 |
C14 |
O16 |
125.1 |
120.1 |
N17 |
C13 |
HC13 |
108.3 |
109.4 |
C13 |
N17 |
S18 |
123.2 |
120.1 |
C13 |
N17 |
HN17 |
107.3 |
119.9 |
O15 |
C14 |
O16 |
121.3 |
120.0 |
C14 |
O15 |
HO15 |
113.6 |
120.0 |
S18 |
N17 |
HN17 |
107.3 |
120.0 |
N17 |
S18 |
N19 |
117.7 |
107.4 |
N17 |
S18 |
O20 |
109.9 |
105.7 |
N17 |
S18 |
O21 |
107.5 |
105.8 |
N19 |
S18 |
O20 |
102.3 |
105.7 |
N19 |
S18 |
O21 |
97.5 |
105.8 |
S18 |
N19 |
H191 |
109.3 |
120.0 |
S18 |
N19 |
H192 |
117.7 |
120.0 |
O20 |
S18 |
O21 |
122.1 |
125.3 |
H191 |
N19 |
H192 |
109.2 |
120.0 |
Torsion Angles for CXA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
C12 |
179.6 |
180.2 |
C2 |
C1 |
C6 |
C5 |
359.6 |
359.5 |
C2 |
C1 |
C6 |
HC6 |
179.6 |
180.0 |
C2 |
C1 |
C12 |
C13 |
85.8 |
89.9 |
C2 |
C1 |
C12 |
H121 |
320.5 |
329.9 |
C2 |
C1 |
C12 |
H122 |
211.1 |
210.0 |
C3 |
C2 |
C1 |
HC2 |
180.0 |
179.9 |
C1 |
C2 |
C3 |
C4 |
360.0 |
0.1 |
C1 |
C2 |
C3 |
HC3 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
C12 |
180.4 |
179.8 |
C6 |
C1 |
C2 |
C3 |
0.3 |
0.2 |
C6 |
C1 |
C2 |
HC2 |
180.3 |
180.3 |
C6 |
C1 |
C12 |
C13 |
266.2 |
269.7 |
C6 |
C1 |
C12 |
H121 |
140.9 |
149.7 |
C6 |
C1 |
C12 |
H122 |
31.4 |
29.8 |
C4 |
C5 |
C6 |
C1 |
0.2 |
0.5 |
C1 |
C6 |
C5 |
HC5 |
180.3 |
180.2 |
C5 |
C6 |
C1 |
HC6 |
180.0 |
179.5 |
C2 |
C1 |
C12 |
C6 |
179.6 |
180.2 |
C12 |
C1 |
C2 |
C3 |
180.7 |
180.0 |
C12 |
C1 |
C2 |
HC2 |
0.7 |
0.0 |
C12 |
C1 |
C6 |
C5 |
179.2 |
179.7 |
C12 |
C1 |
C6 |
HC6 |
359.2 |
0.3 |
C13 |
C12 |
C1 |
H121 |
125.3 |
120.0 |
C13 |
C12 |
C1 |
H122 |
234.7 |
239.9 |
C1 |
C12 |
C13 |
C14 |
62.4 |
179.9 |
C1 |
C12 |
C13 |
N17 |
181.5 |
300.0 |
C1 |
C12 |
C13 |
HC13 |
299.9 |
60.0 |
H121 |
C12 |
C1 |
H122 |
109.4 |
119.9 |
C3 |
C2 |
C1 |
C6 |
0.3 |
0.2 |
C3 |
C2 |
C1 |
C12 |
180.7 |
180.0 |
C1 |
C2 |
C3 |
HC2 |
180.0 |
180.1 |
C4 |
C3 |
C2 |
HC3 |
180.0 |
180.2 |
C2 |
C3 |
C4 |
C5 |
359.8 |
359.8 |
C2 |
C3 |
C4 |
HC4 |
179.8 |
180.0 |
HC2 |
C2 |
C1 |
C6 |
180.3 |
180.3 |
HC2 |
C2 |
C1 |
C12 |
0.7 |
0.0 |
C1 |
C2 |
HC2 |
C3 |
180.0 |
179.9 |
HC2 |
C2 |
C3 |
C4 |
180.0 |
180.1 |
HC2 |
C2 |
C3 |
HC3 |
360.0 |
359.9 |
C4 |
C3 |
C2 |
HC2 |
180.0 |
180.1 |
C2 |
C3 |
C4 |
HC3 |
180.0 |
179.8 |
C5 |
C4 |
C3 |
HC4 |
180.0 |
179.8 |
C3 |
C4 |
C5 |
C6 |
0.1 |
359.9 |
C3 |
C4 |
C5 |
HC5 |
180.0 |
180.1 |
HC3 |
C3 |
C2 |
HC2 |
360.0 |
359.9 |
C2 |
C3 |
HC3 |
C4 |
180.0 |
180.2 |
HC3 |
C3 |
C4 |
C5 |
179.8 |
180.0 |
HC3 |
C3 |
C4 |
HC4 |
359.8 |
0.2 |
C1 |
C6 |
C5 |
C4 |
0.2 |
0.5 |
C5 |
C4 |
C3 |
HC3 |
179.8 |
180.0 |
C3 |
C4 |
C5 |
HC4 |
180.0 |
180.2 |
C6 |
C5 |
C4 |
HC5 |
180.0 |
179.8 |
C4 |
C5 |
C6 |
HC6 |
180.2 |
179.9 |
HC4 |
C4 |
C3 |
HC3 |
359.8 |
0.2 |
C3 |
C4 |
HC4 |
C5 |
180.0 |
179.8 |
HC4 |
C4 |
C5 |
C6 |
180.1 |
179.7 |
HC4 |
C4 |
C5 |
HC5 |
0.1 |
359.9 |
C5 |
C6 |
C1 |
C12 |
179.2 |
179.7 |
C1 |
C6 |
C5 |
HC6 |
180.0 |
180.5 |
C6 |
C5 |
C4 |
HC4 |
180.1 |
179.7 |
C4 |
C5 |
C6 |
HC5 |
180.0 |
180.2 |
HC5 |
C5 |
C4 |
HC4 |
0.1 |
359.9 |
C4 |
C5 |
HC5 |
C6 |
180.0 |
179.8 |
HC5 |
C5 |
C6 |
HC6 |
0.3 |
359.7 |
HC6 |
C6 |
C1 |
C12 |
359.2 |
0.3 |
C1 |
C6 |
HC6 |
C5 |
180.0 |
179.5 |
HC6 |
C6 |
C5 |
HC5 |
0.3 |
359.7 |
C1 |
C12 |
C13 |
H121 |
234.7 |
240.0 |
C1 |
C12 |
C13 |
H122 |
125.3 |
120.0 |
H121 |
C12 |
C13 |
H122 |
250.6 |
240.0 |
C14 |
C13 |
C12 |
N17 |
240.9 |
239.9 |
C14 |
C13 |
C12 |
HC13 |
122.5 |
120.0 |
C12 |
C13 |
C14 |
O15 |
259.6 |
90.1 |
C12 |
C13 |
C14 |
O16 |
79.8 |
270.0 |
N17 |
C13 |
C12 |
HC13 |
241.6 |
240.0 |
C12 |
C13 |
N17 |
S18 |
168.9 |
120.0 |
C12 |
C13 |
N17 |
HN17 |
43.6 |
300.0 |
C1 |
C12 |
H121 |
C13 |
129.3 |
120.0 |
C1 |
C12 |
H121 |
H122 |
244.7 |
240.1 |
C13 |
C12 |
H121 |
H122 |
115.3 |
120.1 |
H121 |
C12 |
C13 |
C14 |
187.7 |
299.9 |
H121 |
C12 |
C13 |
N17 |
306.8 |
60.0 |
H121 |
C12 |
C13 |
HC13 |
65.2 |
180.0 |
C1 |
C12 |
H122 |
C13 |
230.7 |
240.0 |
C1 |
C12 |
H122 |
H121 |
115.4 |
119.9 |
C13 |
C12 |
H122 |
H121 |
244.7 |
239.9 |
H122 |
C12 |
C13 |
C14 |
297.1 |
59.9 |
H122 |
C12 |
C13 |
N17 |
56.3 |
180.0 |
H122 |
C12 |
C13 |
HC13 |
174.6 |
300.0 |
C14 |
C13 |
C12 |
H121 |
187.7 |
299.9 |
C14 |
C13 |
C12 |
H122 |
297.1 |
59.9 |
C12 |
C13 |
C14 |
N17 |
125.1 |
120.1 |
C12 |
C13 |
C14 |
HC13 |
243.9 |
240.0 |
N17 |
C13 |
C14 |
HC13 |
118.7 |
119.9 |
C14 |
C13 |
N17 |
S18 |
290.4 |
240.0 |
C14 |
C13 |
N17 |
HN17 |
165.1 |
60.1 |
O15 |
C14 |
C13 |
O16 |
179.8 |
180.1 |
C13 |
C14 |
O15 |
HO15 |
180.0 |
180.0 |
N17 |
C13 |
C12 |
H121 |
306.8 |
60.0 |
N17 |
C13 |
C12 |
H122 |
56.3 |
180.0 |
C12 |
C13 |
N17 |
C14 |
238.5 |
240.0 |
C12 |
C13 |
N17 |
HC13 |
115.9 |
120.0 |
C14 |
C13 |
N17 |
HC13 |
237.4 |
240.0 |
N17 |
C13 |
C14 |
O15 |
134.5 |
330.0 |
N17 |
C13 |
C14 |
O16 |
314.7 |
149.9 |
S18 |
N17 |
C13 |
HN17 |
125.2 |
180.0 |
C13 |
N17 |
S18 |
N19 |
297.0 |
60.0 |
C13 |
N17 |
S18 |
O20 |
180.5 |
307.4 |
C13 |
N17 |
S18 |
O21 |
45.7 |
172.6 |
HC13 |
C13 |
C12 |
H121 |
65.2 |
180.0 |
HC13 |
C13 |
C12 |
H122 |
174.6 |
300.0 |
C12 |
C13 |
HC13 |
C14 |
119.6 |
120.0 |
C12 |
C13 |
HC13 |
N17 |
236.7 |
240.0 |
C14 |
C13 |
HC13 |
N17 |
117.1 |
120.0 |
HC13 |
C13 |
C14 |
O15 |
15.7 |
210.1 |
HC13 |
C13 |
C14 |
O16 |
195.9 |
30.0 |
HC13 |
C13 |
N17 |
S18 |
53.0 |
360.0 |
HC13 |
C13 |
N17 |
HN17 |
287.8 |
180.0 |
O15 |
C14 |
C13 |
N17 |
134.5 |
330.0 |
O15 |
C14 |
C13 |
HC13 |
15.7 |
210.1 |
C13 |
C14 |
O15 |
O16 |
180.2 |
179.9 |
O16 |
C14 |
C13 |
N17 |
314.7 |
149.9 |
O16 |
C14 |
C13 |
HC13 |
195.9 |
30.0 |
C13 |
C14 |
O16 |
O15 |
179.8 |
180.1 |
O16 |
C14 |
O15 |
HO15 |
359.9 |
0.1 |
HO15 |
O15 |
C14 |
O16 |
359.9 |
0.1 |
S18 |
N17 |
C13 |
HC13 |
53.0 |
360.0 |
C13 |
N17 |
S18 |
HN17 |
234.8 |
180.0 |
N19 |
S18 |
N17 |
O20 |
116.5 |
112.5 |
N19 |
S18 |
N17 |
O21 |
251.3 |
247.3 |
N17 |
S18 |
N19 |
H191 |
54.7 |
180.0 |
N17 |
S18 |
N19 |
H192 |
180.0 |
359.8 |
O20 |
S18 |
N17 |
O21 |
134.9 |
134.8 |
HN17 |
N17 |
C13 |
HC13 |
287.8 |
180.0 |
C13 |
N17 |
HN17 |
S18 |
134.3 |
180.0 |
HN17 |
N17 |
S18 |
N19 |
62.3 |
239.9 |
HN17 |
N17 |
S18 |
O20 |
305.8 |
127.4 |
HN17 |
N17 |
S18 |
O21 |
170.9 |
352.6 |
N19 |
S18 |
N17 |
HN17 |
62.3 |
239.9 |
N17 |
S18 |
N19 |
O20 |
239.5 |
247.5 |
N17 |
S18 |
N19 |
O21 |
114.3 |
112.7 |
O20 |
S18 |
N19 |
O21 |
234.8 |
225.2 |
H191 |
N19 |
S18 |
H192 |
234.7 |
180.1 |
O20 |
S18 |
N17 |
HN17 |
305.8 |
127.4 |
N17 |
S18 |
O20 |
N19 |
125.8 |
113.7 |
N17 |
S18 |
O20 |
O21 |
232.9 |
236.8 |
N19 |
S18 |
O20 |
O21 |
107.2 |
123.1 |
O20 |
S18 |
N19 |
H191 |
175.2 |
292.5 |
O20 |
S18 |
N19 |
H192 |
300.5 |
112.4 |
O21 |
S18 |
N17 |
HN17 |
170.9 |
352.6 |
N17 |
S18 |
O21 |
N19 |
237.8 |
246.2 |
N17 |
S18 |
O21 |
O20 |
128.1 |
123.1 |
N19 |
S18 |
O21 |
O20 |
250.3 |
236.9 |
O21 |
S18 |
N19 |
H191 |
300.4 |
67.3 |
O21 |
S18 |
N19 |
H192 |
65.7 |
247.2 |
H191 |
N19 |
S18 |
O20 |
175.2 |
292.5 |
H191 |
N19 |
S18 |
O21 |
300.4 |
67.3 |
S18 |
N19 |
H191 |
H192 |
130.0 |
179.9 |
H192 |
N19 |
S18 |
O20 |
300.5 |
112.4 |
H192 |
N19 |
S18 |
O21 |
65.7 |
247.2 |
S18 |
N19 |
H192 |
H191 |
234.7 |
180.1 |