PDB Chemical Component CX5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CX5

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C12 C13 1.531 1.532
C12 N3 1.475 1.470
C13 C14 1.532 1.530
C7 N1 1.359 1.313
C7 C8 1.378 1.398
N1 C6 1.354 1.338
C8 N2 1.355 1.313
C6 C4 1.393 1.407
C6 C5 1.424 1.418
C4 C3 1.399 1.357
C14 C10 1.528 1.530
N2 C5 1.351 1.338
C5 C1 1.393 1.404
C3 C2 1.400 1.406
N3 C11 1.458 1.468
N3 C9 1.402 1.349
C1 C2 1.400 1.384
C2 C9 1.492 1.479
C11 C10 1.525 1.533
C9 O1 1.236 1.215
C1 H1 1.080 1.079
C3 H2 1.080 1.081
C4 H3 1.080 1.079
C7 H4 1.080 1.079
C8 H5 1.080 1.080
C11 H6 1.100 1.090
C11 H7 1.100 1.090
C13 H8 1.100 1.090
C13 H9 1.100 1.091
C14 H10 1.100 1.090
C14 H11 1.100 1.090
C10 H12 1.100 1.089
C10 H13 1.100 1.090
C12 H14 1.100 1.090
C12 H15 1.100 1.089

Bond Angles for CX5

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C12 C13 H8 108.2 109.5
C12 C13 H9 108.2 109.5
C13 C14 C10 111.3 109.5
C14 C13 H8 108.2 109.5
C14 C13 H9 108.2 109.5
C13 C14 H10 109.0 109.4
C13 C14 H11 109.0 109.4
C8 C7 N1 121.7 120.7
N1 C7 H4 119.1 119.6
C7 C8 N2 122.2 120.7
C8 C7 H4 119.1 119.7
C7 C8 H5 118.9 119.7
C8 N2 C5 117.1 119.7
N2 C8 H5 118.9 119.7
C6 C4 H3 119.4 119.9
C4 C3 H2 120.0 119.6
C11 C10 C14 110.9 109.3
C10 C14 H10 109.0 109.5
C10 C14 H11 109.0 109.5
C14 C10 H12 109.1 109.5
C14 C10 H13 109.1 109.5
C5 C1 H1 119.4 120.2
C3 C2 C9 121.3 119.7
N3 C11 H6 109.2 109.6
N3 C11 H7 109.2 109.8
N3 C9 O1 121.1 120.0
C1 C2 C9 119.6 119.8
C2 C1 H1 119.3 120.3
C2 C9 O1 115.0 120.1
C10 C11 H6 109.2 109.6
C10 C11 H7 109.2 109.5
C11 C10 H12 109.1 109.5
C11 C10 H13 109.1 109.5
H6 C11 H7 109.4 109.6
H8 C13 H9 109.5 109.5
H10 C14 H11 109.5 109.5
H12 C10 H13 109.4 109.5
H14 C12 H15 109.5 109.7

Torsion Angles for CX5

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C14 C13 C12 H8 239.3 120.0
C14 C13 C12 H9 120.7 240.0
C12 C13 C14 H10 165.5 58.6
C12 C13 C14 H11 285.0 178.6
H8 C13 C12 H9 241.5 120.0
N3 C12 C13 H8 74.5 294.6
N3 C12 C13 H9 193.0 174.6
C12 N3 C11 H6 59.4 293.9
C12 N3 C11 H7 179.0 173.5
C12 N3 C9 O1 180.2 3.7
C12 C13 C14 H8 120.7 240.0
C12 C13 C14 H9 239.3 119.9
C11 C10 C14 C13 309.2 61.4
C10 C14 C13 H10 239.7 239.9
C10 C14 C13 H11 120.3 120.0
C13 C14 C10 H12 69.5 301.4
C13 C14 C10 H13 189.0 181.3
H8 C13 C14 H9 118.5 239.9
H10 C14 C13 H11 240.5 240.1
N1 C7 C8 N2 0.3 359.8
C8 C7 N1 H4 180.0 179.9
N1 C7 C8 H5 180.3 179.9
N1 C7 C8 H4 180.0 180.1
C7 C8 N2 C5 0.3 0.2
N2 C8 C7 H5 180.0 179.9
N1 C6 C4 H3 0.2 0.0
N2 C8 C7 N1 0.3 359.8
N2 C8 C7 H4 180.3 179.7
C7 C8 N2 H5 180.0 180.1
C6 C4 C3 H2 178.8 180.0
C8 N2 C5 C6 359.4 0.0
C5 C6 C4 H3 180.4 179.7
C6 C5 C1 H1 180.3 179.7
C4 C3 C2 C9 179.1 180.0
C10 C14 C13 H8 284.5 58.6
C10 C14 C13 H9 166.0 178.7
C13 C14 C10 H10 120.3 120.0
C13 C14 C10 H11 239.7 240.0
C14 C10 C11 H6 298.8 65.1
C14 C10 C11 H7 179.2 185.4
C11 C10 C14 H12 239.8 120.0
C11 C10 C14 H13 120.2 240.1
H10 C14 C10 H11 119.5 120.0
H12 C10 C14 H13 240.5 120.1
C5 N2 C8 H5 180.3 180.1
N2 C5 C1 H1 0.2 0.2
C2 C1 C5 H1 180.0 179.8
C1 C2 C3 C9 182.5 180.1
C3 C2 C1 H1 178.8 180.0
C3 C2 C9 O1 233.4 309.0
C11 N3 C9 O1 359.9 183.8
C10 C11 N3 H6 239.8 119.8
C10 C11 N3 H7 120.2 240.2
N3 C11 C10 H12 298.7 65.3
N3 C11 C10 H13 179.2 185.4
H6 C11 N3 H7 240.4 120.4
C2 C9 N3 O1 181.1 180.0
C5 C1 C2 H1 180.0 180.2
C3 C2 C1 C9 177.5 179.9
C1 C2 C9 O1 50.8 128.9
N3 C9 C2 O1 178.9 180.0
C9 C2 C1 H1 1.3 0.1
C13 C14 C10 C11 309.2 61.4
C11 C10 C14 H10 189.0 301.4
C11 C10 C14 H11 69.5 181.4
C14 C10 C11 H12 120.2 240.0
C14 C10 C11 H13 239.8 119.9
N3 C11 C10 H6 120.2 240.2
N3 C11 C10 H7 239.8 119.9
H6 C11 C10 H7 119.6 239.7
H12 C10 C11 H13 119.6 239.9
H1 C1 C2 C9 1.3 0.1
H2 C3 C2 C9 359.1 359.9
H3 C4 C3 H2 358.8 360.0
C8 C7 H4 N1 180.0 180.1
H4 C7 C8 N2 180.3 179.7
H4 C7 C8 H5 0.3 359.8
H5 C8 C7 N1 180.3 179.9
C7 C8 H5 N2 180.0 179.9
H5 C8 C7 H4 0.3 359.8
H5 C8 N2 C5 180.3 180.1
H6 C11 C10 C14 298.8 65.1
N3 C11 H6 H7 119.4 239.5
C10 C11 H6 H7 240.6 120.2
H6 C11 C10 H12 178.5 185.1
H6 C11 C10 H13 59.0 305.2
H7 C11 C10 C14 179.2 185.4
N3 C11 H7 H6 240.6 120.4
C10 C11 H7 H6 119.4 239.7
H7 C11 C10 H12 58.9 305.4
H7 C11 C10 H13 299.4 65.5
C12 C13 H8 H9 117.8 240.0
H8 C13 C14 C10 284.5 58.6
C14 C13 H8 H9 242.3 120.1
H8 C13 C14 H10 44.8 178.6
H8 C13 C14 H11 164.3 298.6
C12 C13 H9 H8 242.3 120.0
H9 C13 C14 C10 166.0 178.7
C14 C13 H9 H8 117.8 239.9
H9 C13 C14 H10 286.3 298.7
H9 C13 C14 H11 45.7 58.7
C13 C14 H10 C10 238.4 239.9
H10 C14 C13 H8 44.8 178.6
H10 C14 C13 H9 286.3 298.7
C13 C14 H10 H11 119.2 119.9
C10 C14 H10 H11 240.8 240.0
H10 C14 C10 H12 309.2 181.4
H10 C14 C10 H13 68.7 61.3
C13 C14 H11 C10 121.7 120.1
H11 C14 C13 H8 164.3 298.6
H11 C14 C13 H9 45.7 58.7
C13 C14 H11 H10 240.8 240.1
C10 C14 H11 H10 119.2 120.0
H11 C14 C10 H12 189.7 61.4
H11 C14 C10 H13 309.3 301.3
C11 C10 H12 C14 121.3 240.2
H12 C10 C14 H10 309.2 181.4
H12 C10 C14 H11 189.7 61.4
C14 C10 H12 H13 119.3 239.9
H12 C10 C11 H6 178.5 185.1
H12 C10 C11 H7 58.9 305.4
C11 C10 H12 H13 240.6 120.1
C11 C10 H13 C14 238.7 119.8
H13 C10 C14 H10 68.7 61.3
H13 C10 C14 H11 309.3 301.3
C14 C10 H13 H12 240.7 120.1
H13 C10 C11 H6 59.0 305.2
H13 C10 C11 H7 299.4 65.5
C11 C10 H13 H12 119.4 239.9
H14 C12 C13 H8 194.9 54.4
H14 C12 C13 H9 313.4 294.4
H15 C12 C13 H8 314.1 174.9
H15 C12 C13 H9 72.6 54.8