PDB Chemical Component CVW
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CVW
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N01 |
C02 |
1.490 |
1.469 |
| C02 |
C03 |
1.565 |
1.530 |
| C03 |
C04 |
1.500 |
1.507 |
| C05 |
C04 |
1.441 |
1.342 |
| C05 |
N06 |
1.379 |
1.368 |
| C04 |
C12 |
1.417 |
1.465 |
| N06 |
C07 |
1.404 |
1.378 |
| C12 |
C07 |
1.435 |
1.406 |
| C12 |
C11 |
1.406 |
1.396 |
| C07 |
C08 |
1.407 |
1.391 |
| C11 |
C10 |
1.444 |
1.367 |
| C08 |
C09 |
1.427 |
1.377 |
| C10 |
C09 |
1.358 |
1.388 |
| C10 |
C13 |
1.458 |
1.507 |
| C13 |
H1 |
1.100 |
1.090 |
| C13 |
H2 |
1.100 |
1.090 |
| C13 |
H3 |
1.100 |
1.089 |
| C02 |
H4 |
1.100 |
1.090 |
| C02 |
H5 |
1.100 |
1.089 |
| C03 |
H6 |
1.100 |
1.090 |
| C03 |
H7 |
1.100 |
1.090 |
| C05 |
H8 |
1.080 |
1.080 |
| C08 |
H9 |
1.080 |
1.080 |
| C09 |
H10 |
1.080 |
1.080 |
| C11 |
H11 |
1.080 |
1.080 |
| N01 |
H12 |
1.000 |
1.009 |
| N01 |
H13 |
1.000 |
1.009 |
| N06 |
H15 |
1.000 |
0.970 |
Bond Angles for CVW
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N01 |
C02 |
H4 |
107.8 |
109.5 |
| N01 |
C02 |
H5 |
107.7 |
109.5 |
| C02 |
C03 |
C04 |
111.5 |
109.5 |
| C03 |
C02 |
H4 |
107.7 |
109.4 |
| C03 |
C02 |
H5 |
107.7 |
109.5 |
| C02 |
C03 |
H6 |
108.9 |
109.5 |
| C02 |
C03 |
H7 |
108.9 |
109.4 |
| C03 |
C04 |
C12 |
128.3 |
126.5 |
| C04 |
C03 |
H6 |
109.0 |
109.5 |
| C04 |
C03 |
H7 |
109.0 |
109.5 |
| C05 |
C04 |
C12 |
105.3 |
107.0 |
| C05 |
N06 |
C07 |
105.7 |
109.9 |
| N06 |
C05 |
H8 |
124.1 |
125.0 |
| C05 |
N06 |
H15 |
127.1 |
125.1 |
| C04 |
C12 |
C07 |
107.1 |
106.1 |
| C04 |
C12 |
C11 |
134.9 |
134.0 |
| C12 |
C11 |
H11 |
120.1 |
120.1 |
| C07 |
C08 |
C09 |
118.3 |
119.8 |
| C07 |
C08 |
H9 |
120.9 |
120.1 |
| C10 |
C09 |
C08 |
121.1 |
120.7 |
| C09 |
C08 |
H9 |
120.9 |
120.1 |
| C08 |
C09 |
H10 |
119.4 |
119.7 |
| C13 |
C10 |
C09 |
120.1 |
119.8 |
| C10 |
C09 |
H10 |
119.5 |
119.6 |
| C10 |
C13 |
H1 |
109.5 |
109.5 |
| C10 |
C13 |
H2 |
109.5 |
109.4 |
| C10 |
C13 |
H3 |
109.5 |
109.5 |
| H1 |
C13 |
H2 |
109.5 |
109.5 |
| H1 |
C13 |
H3 |
109.4 |
109.5 |
| H2 |
C13 |
H3 |
109.4 |
109.5 |
| H4 |
C02 |
H5 |
109.5 |
109.4 |
| H6 |
C03 |
H7 |
109.5 |
109.5 |
| H12 |
N01 |
H13 |
109.5 |
110.9 |
Torsion Angles for CVW
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C03 |
C02 |
N01 |
H4 |
239.0 |
120.0 |
| C03 |
C02 |
N01 |
H5 |
121.0 |
240.0 |
| N01 |
C02 |
C03 |
H6 |
323.6 |
300.0 |
| N01 |
C02 |
C03 |
H7 |
83.1 |
60.0 |
| H4 |
C02 |
N01 |
H5 |
242.0 |
120.0 |
| N01 |
C02 |
C03 |
H4 |
121.0 |
240.0 |
| N01 |
C02 |
C03 |
H5 |
239.0 |
120.1 |
| C02 |
C03 |
C04 |
C12 |
75.7 |
85.0 |
| C04 |
C03 |
C02 |
H6 |
239.7 |
240.0 |
| C04 |
C03 |
C02 |
H7 |
120.3 |
120.0 |
| H4 |
C02 |
C03 |
H5 |
118.0 |
240.0 |
| H6 |
C03 |
C02 |
H7 |
240.6 |
240.0 |
| C04 |
C03 |
C02 |
H4 |
82.3 |
300.0 |
| C04 |
C03 |
C02 |
H5 |
324.3 |
59.9 |
| C02 |
C03 |
C04 |
H6 |
120.3 |
120.0 |
| C02 |
C03 |
C04 |
H7 |
239.7 |
240.0 |
| C05 |
C04 |
C03 |
C12 |
183.4 |
180.1 |
| C03 |
C04 |
C12 |
C07 |
182.5 |
180.0 |
| C03 |
C04 |
C12 |
C11 |
2.0 |
0.1 |
| H6 |
C03 |
C04 |
H7 |
119.5 |
120.0 |
| C03 |
C04 |
C05 |
C12 |
177.3 |
179.9 |
| C05 |
C04 |
C03 |
H6 |
138.8 |
145.1 |
| C05 |
C04 |
C03 |
H7 |
19.4 |
25.0 |
| C05 |
C04 |
C12 |
C07 |
359.6 |
360.0 |
| C05 |
C04 |
C12 |
C11 |
179.2 |
180.1 |
| N06 |
C05 |
C04 |
C12 |
0.4 |
0.0 |
| C12 |
C04 |
C03 |
H6 |
315.4 |
325.0 |
| C12 |
C04 |
C03 |
H7 |
196.0 |
204.9 |
| C04 |
C12 |
C11 |
H11 |
359.1 |
359.9 |
| C07 |
N06 |
C05 |
H8 |
179.7 |
180.0 |
| C05 |
N06 |
C07 |
H15 |
180.0 |
180.0 |
| N06 |
C07 |
C08 |
H9 |
0.2 |
359.6 |
| C05 |
N06 |
C07 |
C12 |
0.0 |
360.0 |
| C04 |
C12 |
C07 |
C11 |
179.6 |
180.1 |
| C12 |
C07 |
C08 |
H9 |
179.4 |
180.0 |
| C04 |
C12 |
C11 |
C07 |
180.5 |
179.9 |
| C05 |
N06 |
C07 |
C08 |
179.3 |
180.3 |
| C04 |
C12 |
C07 |
C08 |
180.9 |
179.8 |
| C10 |
C09 |
C08 |
C07 |
0.1 |
359.5 |
| C09 |
C08 |
C07 |
H9 |
180.0 |
180.6 |
| C07 |
C08 |
C09 |
H10 |
180.1 |
179.4 |
| C11 |
C10 |
C09 |
H10 |
179.7 |
180.3 |
| C11 |
C10 |
C13 |
H1 |
90.6 |
269.7 |
| C11 |
C10 |
C13 |
H2 |
210.6 |
29.7 |
| C11 |
C10 |
C13 |
H3 |
330.6 |
149.7 |
| C07 |
C08 |
C09 |
H9 |
180.0 |
179.4 |
| C13 |
C10 |
C09 |
C08 |
180.9 |
180.0 |
| C10 |
C09 |
C08 |
H10 |
180.0 |
180.0 |
| C07 |
C08 |
C09 |
C10 |
0.1 |
359.5 |
| C10 |
C09 |
C08 |
H9 |
180.2 |
180.1 |
| C08 |
C09 |
C10 |
H10 |
180.0 |
180.0 |
| C09 |
C10 |
C13 |
H1 |
269.4 |
90.0 |
| C09 |
C10 |
C13 |
H2 |
29.4 |
210.0 |
| C09 |
C10 |
C13 |
H3 |
149.4 |
330.0 |
| C13 |
C10 |
C09 |
H10 |
0.9 |
0.0 |
| H1 |
C13 |
C10 |
H2 |
240.0 |
240.0 |
| H1 |
C13 |
C10 |
H3 |
120.0 |
120.0 |
| H2 |
C13 |
C10 |
H3 |
240.0 |
240.0 |
| H1 |
C13 |
C10 |
C09 |
269.4 |
90.0 |
| C10 |
C13 |
H1 |
H2 |
120.0 |
120.0 |
| C10 |
C13 |
H1 |
H3 |
240.0 |
240.0 |
| H2 |
C13 |
H1 |
H3 |
120.0 |
120.0 |
| H2 |
C13 |
C10 |
C09 |
29.4 |
210.0 |
| C10 |
C13 |
H2 |
H1 |
239.9 |
240.0 |
| C10 |
C13 |
H2 |
H3 |
120.0 |
120.0 |
| H1 |
C13 |
H2 |
H3 |
240.0 |
240.0 |
| H3 |
C13 |
C10 |
C09 |
149.4 |
330.0 |
| C10 |
C13 |
H3 |
H1 |
120.0 |
120.0 |
| C10 |
C13 |
H3 |
H2 |
240.0 |
240.0 |
| H1 |
C13 |
H3 |
H2 |
120.0 |
120.0 |
| N01 |
C02 |
H4 |
H5 |
116.9 |
240.0 |
| H4 |
C02 |
C03 |
C04 |
82.3 |
300.0 |
| C03 |
C02 |
H4 |
H5 |
243.1 |
120.0 |
| H4 |
C02 |
C03 |
H6 |
202.6 |
60.0 |
| H4 |
C02 |
C03 |
H7 |
322.0 |
180.0 |
| N01 |
C02 |
H5 |
H4 |
243.1 |
120.0 |
| H5 |
C02 |
C03 |
C04 |
324.3 |
59.9 |
| C03 |
C02 |
H5 |
H4 |
116.9 |
240.1 |
| H5 |
C02 |
C03 |
H6 |
84.6 |
179.9 |
| H5 |
C02 |
C03 |
H7 |
204.0 |
300.0 |
| C02 |
C03 |
H6 |
C04 |
238.2 |
240.0 |
| H6 |
C03 |
C02 |
H4 |
202.6 |
60.0 |
| H6 |
C03 |
C02 |
H5 |
84.6 |
179.9 |
| C02 |
C03 |
H6 |
H7 |
119.1 |
120.0 |
| H6 |
C03 |
C04 |
C12 |
315.4 |
325.0 |
| C04 |
C03 |
H6 |
H7 |
240.9 |
240.0 |
| C02 |
C03 |
H7 |
C04 |
121.8 |
120.0 |
| H7 |
C03 |
C02 |
H4 |
322.0 |
180.0 |
| H7 |
C03 |
C02 |
H5 |
204.0 |
300.0 |
| C02 |
C03 |
H7 |
H6 |
240.9 |
240.0 |
| H7 |
C03 |
C04 |
C12 |
196.0 |
204.9 |
| C04 |
C03 |
H7 |
H6 |
119.1 |
120.0 |
| H8 |
C05 |
C04 |
C12 |
180.4 |
180.0 |
| H8 |
C05 |
N06 |
C07 |
179.7 |
180.0 |
| H8 |
C05 |
N06 |
H15 |
359.7 |
0.0 |
| C07 |
C08 |
H9 |
C09 |
180.0 |
180.6 |
| H9 |
C08 |
C09 |
H10 |
0.1 |
0.0 |
| C10 |
C09 |
H10 |
C08 |
180.0 |
180.0 |
| H10 |
C09 |
C08 |
H9 |
0.1 |
0.0 |
| H12 |
N01 |
C02 |
H4 |
301.0 |
296.1 |
| H12 |
N01 |
C02 |
H5 |
59.0 |
176.1 |
| H13 |
N01 |
C02 |
H4 |
61.0 |
60.0 |
| H13 |
N01 |
C02 |
H5 |
179.0 |
300.0 |
| C05 |
N06 |
H15 |
C07 |
180.0 |
180.0 |
| H15 |
N06 |
C05 |
H8 |
359.7 |
0.0 |