PDB Chemical Component CVF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CVF

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C3 1.525 1.530
C2 N 1.455 1.465
C3 C4 1.511 1.506
C4 C7 1.384 1.383
C4 C5 1.387 1.384
N C1 1.335 1.348
C7 C8 1.383 1.379
C5 C6 1.384 1.380
O2 C1 1.229 1.213
C8 C9 1.392 1.394
C1 C 1.500 1.506
C6 C9 1.393 1.393
O1 C15 1.251 1.215
C9 C10 1.485 1.485
C16 C10 1.395 1.390
C16 C14 1.392 1.395
C10 C11 1.395 1.394
C15 C14 1.506 1.477
C15 O 1.255 1.347
C14 C13 1.389 1.397
C11 C12 1.384 1.381
C13 C12 1.381 1.380
N H3 1.000 0.970
C H2 1.100 1.090
C H1 1.100 1.090
C H 1.100 1.090
O H16 0.949 0.967
C11 H12 1.080 1.080
C12 H13 1.080 1.080
C13 H14 1.080 1.080
C16 H15 1.080 1.079
C2 H4 1.099 1.090
C2 H5 1.100 1.091
C3 H7 1.100 1.089
C3 H6 1.100 1.089
C5 H8 1.081 1.080
C6 H9 1.080 1.080
C7 H10 1.080 1.081
C8 H11 1.080 1.080

Bond Angles for CVF

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C3 C4 114.9 109.5
C3 C2 H4 108.7 109.5
C3 C2 H5 108.7 109.5
C2 C3 H7 108.1 109.5
C2 C3 H6 108.1 109.4
C2 N H3 118.4 120.0
C3 C4 C7 121.0 119.9
C3 C4 C5 120.9 119.9
C4 C3 H7 108.1 109.5
C4 C3 H6 108.1 109.5
C5 C4 C7 118.1 120.2
C4 C7 C8 121.1 120.2
C4 C7 H10 119.5 119.9
C4 C5 C6 121.0 120.1
C4 C5 H8 119.5 119.9
N C1 C 116.3 120.0
C1 N H3 118.4 120.0
C7 C8 C9 121.2 119.9
C8 C7 H10 119.5 119.9
C7 C8 H11 119.4 120.1
C5 C6 C9 121.1 119.9
C6 C5 H8 119.5 119.9
C5 C6 H9 119.4 120.1
C6 C9 C8 117.5 119.8
C9 C8 H11 119.4 120.0
C1 C H2 109.5 109.5
C1 C H1 109.5 109.5
C1 C H 109.5 109.5
C9 C6 H9 119.5 120.0
C10 C11 C12 120.9 120.2
C10 C11 H12 119.6 119.9
C15 O H16 109.5 117.0
C14 C13 H14 119.9 119.9
C12 C11 H12 119.6 119.9
C11 C12 H13 119.9 119.9
C13 C12 H13 119.9 119.8
H2 C H1 109.5 109.5
H2 C H 109.5 109.5
H1 C H 109.5 109.5
H4 C2 H5 109.5 109.4
H7 C3 H6 109.4 109.5

Torsion Angles for CVF

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C2 N H3 293.3 0.3
C2 C3 C4 C7 348.8 90.0
C2 C3 C4 C5 168.6 270.3
C4 C3 C2 H7 239.2 240.0
C4 C3 C2 H6 120.8 120.0
H4 C2 C3 H5 240.9 120.0
H7 C3 C2 H6 241.6 240.0
C1 N C2 H3 180.0 179.7
C4 C3 C2 H4 40.5 60.0
C4 C3 C2 H5 159.6 300.0
C2 C3 C4 H7 120.8 120.0
C2 C3 C4 H6 239.2 240.0
C5 C4 C3 C7 179.9 180.3
C3 C4 C7 C8 179.0 180.0
C3 C4 C7 H10 359.0 360.0
C3 C4 C5 C6 180.9 180.0
C3 C4 C5 H8 0.9 360.0
H7 C3 C4 H6 118.4 120.0
C3 C4 C7 C5 179.9 180.3
C7 C4 C3 H7 228.0 330.0
C7 C4 C3 H6 109.6 210.0
C7 C4 C5 C6 0.8 0.3
C7 C4 C5 H8 180.8 180.2
C4 C7 C8 C9 359.5 360.0
C8 C7 C4 H10 180.0 180.1
C4 C7 C8 H11 179.5 180.0
C3 C4 C5 C7 180.1 179.7
C5 C4 C3 H7 47.8 150.3
C5 C4 C3 H6 289.5 30.3
C5 C4 C7 C8 359.1 359.8
C5 C4 C7 H10 179.1 179.7
C4 C5 C6 C9 0.7 360.0
C6 C5 C4 H8 180.0 180.0
C4 C5 C6 H9 180.7 180.0
C2 N C1 H3 180.0 180.3
N C1 C H2 181.1 0.0
N C1 C H1 301.0 120.0
N C1 C H 61.1 240.0
C4 C7 C8 H10 180.0 179.9
C6 C9 C8 C7 2.0 0.3
C9 C8 C7 H11 180.0 180.0
C6 C5 C4 C7 0.8 0.3
C4 C5 C6 H8 180.0 180.0
C5 C6 C9 C8 357.9 359.7
C9 C6 C5 H9 180.0 180.0
O2 C1 N H3 172.0 180.0
O2 C1 C H2 0.0 179.9
O2 C1 C H1 120.0 299.9
O2 C1 C H 240.0 59.9
C9 C8 C7 H10 179.5 180.0
C7 C8 C9 H11 180.0 180.0
C8 C9 C6 H9 178.0 179.7
C C1 N H3 350.9 360.0
H2 C C1 H1 240.0 240.0
H2 C C1 H 120.0 120.0
H1 C C1 H 240.0 240.0
C7 C8 C9 C6 2.0 0.3
C9 C6 C5 H8 180.7 180.0
C5 C6 C9 H9 180.0 180.0
C6 C9 C8 H11 181.9 180.2
O1 C15 O H16 0.0 360.0
C9 C10 C11 H12 359.1 359.7
C16 C10 C11 H12 179.6 180.0
C16 C14 C13 H14 179.7 180.0
C12 C11 C10 H12 180.0 180.1
C10 C11 C12 H13 180.1 180.0
C14 C15 O H16 180.4 180.0
C15 C14 C13 H14 359.1 0.0
C14 C13 C12 H13 180.2 180.0
C10 C11 C12 H12 180.0 179.9
C13 C12 C11 H13 180.0 179.9
C13 C12 C11 H12 180.1 180.0
C11 C12 C13 H13 180.0 180.1
H3 N C1 C 350.9 360.0
C1 C H2 H1 120.0 120.0
C1 C H2 H 240.0 240.0
H1 C H2 H 120.0 120.0
C1 C H1 H2 240.0 240.0
C1 C H1 H 120.0 120.0
H2 C H1 H 240.0 240.0
C1 C H H2 120.0 120.0
C1 C H H1 240.0 240.0
H2 C H H1 120.0 120.0
C10 C11 H12 C12 180.0 180.1
H12 C11 C12 H13 0.1 0.1
H13 C12 C11 H12 0.1 0.1
H14 C13 C12 H13 0.3 359.9
H4 C2 C3 C4 40.5 60.0
C3 C2 H4 H5 118.6 240.0
H4 C2 C3 H7 161.3 180.0
H4 C2 C3 H6 279.7 300.0
H4 C2 N H3 172.9 120.3
H5 C2 C3 C4 159.6 300.0
C3 C2 H5 H4 241.4 120.0
H5 C2 C3 H7 280.4 60.0
H5 C2 C3 H6 38.8 180.0
H5 C2 N H3 53.8 240.3
C2 C3 H7 C4 235.1 240.0
H7 C3 C2 H4 161.3 180.0
H7 C3 C2 H5 280.4 60.0
C2 C3 H7 H6 117.5 120.0
H7 C3 C4 C7 228.0 330.0
H7 C3 C4 C5 47.8 150.3
C4 C3 H7 H6 242.5 240.0
C2 C3 H6 C4 124.9 120.0
H6 C3 C2 H4 279.7 300.0
H6 C3 C2 H5 38.8 180.0
C2 C3 H6 H7 242.5 240.0
H6 C3 C4 C7 109.6 210.0
H6 C3 C4 C5 289.5 30.3
C4 C3 H6 H7 117.5 120.0
H8 C5 C4 C7 180.8 180.2
C4 C5 H8 C6 180.0 180.0
H8 C5 C6 C9 180.7 180.0
H8 C5 C6 H9 0.7 0.0
C5 C6 H9 C9 180.0 180.0
H9 C6 C5 H8 0.7 0.0
H9 C6 C9 C8 178.0 179.7
C4 C7 H10 C8 180.0 180.1
H10 C7 C8 C9 179.5 180.0
H10 C7 C8 H11 359.5 0.1
C7 C8 H11 C9 180.0 180.0
H11 C8 C7 H10 359.5 0.1