PDB Chemical Component CVF
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CVF
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C2 |
C3 |
1.525 |
1.530 |
C2 |
N |
1.455 |
1.465 |
C3 |
C4 |
1.511 |
1.506 |
C4 |
C7 |
1.384 |
1.383 |
C4 |
C5 |
1.387 |
1.384 |
N |
C1 |
1.335 |
1.348 |
C7 |
C8 |
1.383 |
1.379 |
C5 |
C6 |
1.384 |
1.380 |
O2 |
C1 |
1.229 |
1.213 |
C8 |
C9 |
1.392 |
1.394 |
C1 |
C |
1.500 |
1.506 |
C6 |
C9 |
1.393 |
1.393 |
O1 |
C15 |
1.251 |
1.215 |
C9 |
C10 |
1.485 |
1.485 |
C16 |
C10 |
1.395 |
1.390 |
C16 |
C14 |
1.392 |
1.395 |
C10 |
C11 |
1.395 |
1.394 |
C15 |
C14 |
1.506 |
1.477 |
C15 |
O |
1.255 |
1.347 |
C14 |
C13 |
1.389 |
1.397 |
C11 |
C12 |
1.384 |
1.381 |
C13 |
C12 |
1.381 |
1.380 |
N |
H3 |
1.000 |
0.970 |
C |
H2 |
1.100 |
1.090 |
C |
H1 |
1.100 |
1.090 |
C |
H |
1.100 |
1.090 |
O |
H16 |
0.949 |
0.967 |
C11 |
H12 |
1.080 |
1.080 |
C12 |
H13 |
1.080 |
1.080 |
C13 |
H14 |
1.080 |
1.080 |
C16 |
H15 |
1.080 |
1.079 |
C2 |
H4 |
1.099 |
1.090 |
C2 |
H5 |
1.100 |
1.091 |
C3 |
H7 |
1.100 |
1.089 |
C3 |
H6 |
1.100 |
1.089 |
C5 |
H8 |
1.081 |
1.080 |
C6 |
H9 |
1.080 |
1.080 |
C7 |
H10 |
1.080 |
1.081 |
C8 |
H11 |
1.080 |
1.080 |
Bond Angles for CVF
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C3 |
C4 |
114.9 |
109.5 |
C3 |
C2 |
H4 |
108.7 |
109.5 |
C3 |
C2 |
H5 |
108.7 |
109.5 |
C2 |
C3 |
H7 |
108.1 |
109.5 |
C2 |
C3 |
H6 |
108.1 |
109.4 |
C2 |
N |
H3 |
118.4 |
120.0 |
C3 |
C4 |
C7 |
121.0 |
119.9 |
C3 |
C4 |
C5 |
120.9 |
119.9 |
C4 |
C3 |
H7 |
108.1 |
109.5 |
C4 |
C3 |
H6 |
108.1 |
109.5 |
C5 |
C4 |
C7 |
118.1 |
120.2 |
C4 |
C7 |
C8 |
121.1 |
120.2 |
C4 |
C7 |
H10 |
119.5 |
119.9 |
C4 |
C5 |
C6 |
121.0 |
120.1 |
C4 |
C5 |
H8 |
119.5 |
119.9 |
N |
C1 |
C |
116.3 |
120.0 |
C1 |
N |
H3 |
118.4 |
120.0 |
C7 |
C8 |
C9 |
121.2 |
119.9 |
C8 |
C7 |
H10 |
119.5 |
119.9 |
C7 |
C8 |
H11 |
119.4 |
120.1 |
C5 |
C6 |
C9 |
121.1 |
119.9 |
C6 |
C5 |
H8 |
119.5 |
119.9 |
C5 |
C6 |
H9 |
119.4 |
120.1 |
C6 |
C9 |
C8 |
117.5 |
119.8 |
C9 |
C8 |
H11 |
119.4 |
120.0 |
C1 |
C |
H2 |
109.5 |
109.5 |
C1 |
C |
H1 |
109.5 |
109.5 |
C1 |
C |
H |
109.5 |
109.5 |
C9 |
C6 |
H9 |
119.5 |
120.0 |
C10 |
C11 |
C12 |
120.9 |
120.2 |
C10 |
C11 |
H12 |
119.6 |
119.9 |
C15 |
O |
H16 |
109.5 |
117.0 |
C14 |
C13 |
H14 |
119.9 |
119.9 |
C12 |
C11 |
H12 |
119.6 |
119.9 |
C11 |
C12 |
H13 |
119.9 |
119.9 |
C13 |
C12 |
H13 |
119.9 |
119.8 |
H2 |
C |
H1 |
109.5 |
109.5 |
H2 |
C |
H |
109.5 |
109.5 |
H1 |
C |
H |
109.5 |
109.5 |
H4 |
C2 |
H5 |
109.5 |
109.4 |
H7 |
C3 |
H6 |
109.4 |
109.5 |
Torsion Angles for CVF
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C2 |
N |
H3 |
293.3 |
0.3 |
C2 |
C3 |
C4 |
C7 |
348.8 |
90.0 |
C2 |
C3 |
C4 |
C5 |
168.6 |
270.3 |
C4 |
C3 |
C2 |
H7 |
239.2 |
240.0 |
C4 |
C3 |
C2 |
H6 |
120.8 |
120.0 |
H4 |
C2 |
C3 |
H5 |
240.9 |
120.0 |
H7 |
C3 |
C2 |
H6 |
241.6 |
240.0 |
C1 |
N |
C2 |
H3 |
180.0 |
179.7 |
C4 |
C3 |
C2 |
H4 |
40.5 |
60.0 |
C4 |
C3 |
C2 |
H5 |
159.6 |
300.0 |
C2 |
C3 |
C4 |
H7 |
120.8 |
120.0 |
C2 |
C3 |
C4 |
H6 |
239.2 |
240.0 |
C5 |
C4 |
C3 |
C7 |
179.9 |
180.3 |
C3 |
C4 |
C7 |
C8 |
179.0 |
180.0 |
C3 |
C4 |
C7 |
H10 |
359.0 |
360.0 |
C3 |
C4 |
C5 |
C6 |
180.9 |
180.0 |
C3 |
C4 |
C5 |
H8 |
0.9 |
360.0 |
H7 |
C3 |
C4 |
H6 |
118.4 |
120.0 |
C3 |
C4 |
C7 |
C5 |
179.9 |
180.3 |
C7 |
C4 |
C3 |
H7 |
228.0 |
330.0 |
C7 |
C4 |
C3 |
H6 |
109.6 |
210.0 |
C7 |
C4 |
C5 |
C6 |
0.8 |
0.3 |
C7 |
C4 |
C5 |
H8 |
180.8 |
180.2 |
C4 |
C7 |
C8 |
C9 |
359.5 |
360.0 |
C8 |
C7 |
C4 |
H10 |
180.0 |
180.1 |
C4 |
C7 |
C8 |
H11 |
179.5 |
180.0 |
C3 |
C4 |
C5 |
C7 |
180.1 |
179.7 |
C5 |
C4 |
C3 |
H7 |
47.8 |
150.3 |
C5 |
C4 |
C3 |
H6 |
289.5 |
30.3 |
C5 |
C4 |
C7 |
C8 |
359.1 |
359.8 |
C5 |
C4 |
C7 |
H10 |
179.1 |
179.7 |
C4 |
C5 |
C6 |
C9 |
0.7 |
360.0 |
C6 |
C5 |
C4 |
H8 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
H9 |
180.7 |
180.0 |
C2 |
N |
C1 |
H3 |
180.0 |
180.3 |
N |
C1 |
C |
H2 |
181.1 |
0.0 |
N |
C1 |
C |
H1 |
301.0 |
120.0 |
N |
C1 |
C |
H |
61.1 |
240.0 |
C4 |
C7 |
C8 |
H10 |
180.0 |
179.9 |
C6 |
C9 |
C8 |
C7 |
2.0 |
0.3 |
C9 |
C8 |
C7 |
H11 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
C7 |
0.8 |
0.3 |
C4 |
C5 |
C6 |
H8 |
180.0 |
180.0 |
C5 |
C6 |
C9 |
C8 |
357.9 |
359.7 |
C9 |
C6 |
C5 |
H9 |
180.0 |
180.0 |
O2 |
C1 |
N |
H3 |
172.0 |
180.0 |
O2 |
C1 |
C |
H2 |
0.0 |
179.9 |
O2 |
C1 |
C |
H1 |
120.0 |
299.9 |
O2 |
C1 |
C |
H |
240.0 |
59.9 |
C9 |
C8 |
C7 |
H10 |
179.5 |
180.0 |
C7 |
C8 |
C9 |
H11 |
180.0 |
180.0 |
C8 |
C9 |
C6 |
H9 |
178.0 |
179.7 |
C |
C1 |
N |
H3 |
350.9 |
360.0 |
H2 |
C |
C1 |
H1 |
240.0 |
240.0 |
H2 |
C |
C1 |
H |
120.0 |
120.0 |
H1 |
C |
C1 |
H |
240.0 |
240.0 |
C7 |
C8 |
C9 |
C6 |
2.0 |
0.3 |
C9 |
C6 |
C5 |
H8 |
180.7 |
180.0 |
C5 |
C6 |
C9 |
H9 |
180.0 |
180.0 |
C6 |
C9 |
C8 |
H11 |
181.9 |
180.2 |
O1 |
C15 |
O |
H16 |
0.0 |
360.0 |
C9 |
C10 |
C11 |
H12 |
359.1 |
359.7 |
C16 |
C10 |
C11 |
H12 |
179.6 |
180.0 |
C16 |
C14 |
C13 |
H14 |
179.7 |
180.0 |
C12 |
C11 |
C10 |
H12 |
180.0 |
180.1 |
C10 |
C11 |
C12 |
H13 |
180.1 |
180.0 |
C14 |
C15 |
O |
H16 |
180.4 |
180.0 |
C15 |
C14 |
C13 |
H14 |
359.1 |
0.0 |
C14 |
C13 |
C12 |
H13 |
180.2 |
180.0 |
C10 |
C11 |
C12 |
H12 |
180.0 |
179.9 |
C13 |
C12 |
C11 |
H13 |
180.0 |
179.9 |
C13 |
C12 |
C11 |
H12 |
180.1 |
180.0 |
C11 |
C12 |
C13 |
H13 |
180.0 |
180.1 |
H3 |
N |
C1 |
C |
350.9 |
360.0 |
C1 |
C |
H2 |
H1 |
120.0 |
120.0 |
C1 |
C |
H2 |
H |
240.0 |
240.0 |
H1 |
C |
H2 |
H |
120.0 |
120.0 |
C1 |
C |
H1 |
H2 |
240.0 |
240.0 |
C1 |
C |
H1 |
H |
120.0 |
120.0 |
H2 |
C |
H1 |
H |
240.0 |
240.0 |
C1 |
C |
H |
H2 |
120.0 |
120.0 |
C1 |
C |
H |
H1 |
240.0 |
240.0 |
H2 |
C |
H |
H1 |
120.0 |
120.0 |
C10 |
C11 |
H12 |
C12 |
180.0 |
180.1 |
H12 |
C11 |
C12 |
H13 |
0.1 |
0.1 |
H13 |
C12 |
C11 |
H12 |
0.1 |
0.1 |
H14 |
C13 |
C12 |
H13 |
0.3 |
359.9 |
H4 |
C2 |
C3 |
C4 |
40.5 |
60.0 |
C3 |
C2 |
H4 |
H5 |
118.6 |
240.0 |
H4 |
C2 |
C3 |
H7 |
161.3 |
180.0 |
H4 |
C2 |
C3 |
H6 |
279.7 |
300.0 |
H4 |
C2 |
N |
H3 |
172.9 |
120.3 |
H5 |
C2 |
C3 |
C4 |
159.6 |
300.0 |
C3 |
C2 |
H5 |
H4 |
241.4 |
120.0 |
H5 |
C2 |
C3 |
H7 |
280.4 |
60.0 |
H5 |
C2 |
C3 |
H6 |
38.8 |
180.0 |
H5 |
C2 |
N |
H3 |
53.8 |
240.3 |
C2 |
C3 |
H7 |
C4 |
235.1 |
240.0 |
H7 |
C3 |
C2 |
H4 |
161.3 |
180.0 |
H7 |
C3 |
C2 |
H5 |
280.4 |
60.0 |
C2 |
C3 |
H7 |
H6 |
117.5 |
120.0 |
H7 |
C3 |
C4 |
C7 |
228.0 |
330.0 |
H7 |
C3 |
C4 |
C5 |
47.8 |
150.3 |
C4 |
C3 |
H7 |
H6 |
242.5 |
240.0 |
C2 |
C3 |
H6 |
C4 |
124.9 |
120.0 |
H6 |
C3 |
C2 |
H4 |
279.7 |
300.0 |
H6 |
C3 |
C2 |
H5 |
38.8 |
180.0 |
C2 |
C3 |
H6 |
H7 |
242.5 |
240.0 |
H6 |
C3 |
C4 |
C7 |
109.6 |
210.0 |
H6 |
C3 |
C4 |
C5 |
289.5 |
30.3 |
C4 |
C3 |
H6 |
H7 |
117.5 |
120.0 |
H8 |
C5 |
C4 |
C7 |
180.8 |
180.2 |
C4 |
C5 |
H8 |
C6 |
180.0 |
180.0 |
H8 |
C5 |
C6 |
C9 |
180.7 |
180.0 |
H8 |
C5 |
C6 |
H9 |
0.7 |
0.0 |
C5 |
C6 |
H9 |
C9 |
180.0 |
180.0 |
H9 |
C6 |
C5 |
H8 |
0.7 |
0.0 |
H9 |
C6 |
C9 |
C8 |
178.0 |
179.7 |
C4 |
C7 |
H10 |
C8 |
180.0 |
180.1 |
H10 |
C7 |
C8 |
C9 |
179.5 |
180.0 |
H10 |
C7 |
C8 |
H11 |
359.5 |
0.1 |
C7 |
C8 |
H11 |
C9 |
180.0 |
180.0 |
H11 |
C8 |
C7 |
H10 |
359.5 |
0.1 |