PDB Chemical Component CV1

Ideal Model

Chemical Description

Name (2R,3R,4S,5R,13R,14S,15R,16R)-24-amino-18-bromo-3,4,14,15-tetrahydroxy-7,9,11,25,26-pentaoxa-17,19,22-triaza-1-azonia-8 ,10-diphosphapentacyclo[18.3.1.1^2,5^.1^13,16^.0^17,21^]hexacosa-1(24),18,20,22-tetraene-8,10-diolate 8,10-dioxide
Synonyms 8-BROMO-CYCLIC-ADP-RIBOSE
Formula C15 H21 Br N5 O13 P2
Formal charge 1
Molecular weight 621.204 g/mol
Component type NON-POLYMER

Chemical features

Atom count 57
Chiral atom count 8
Chiral atoms C1' C1D C2' C2D C3' C3D C4' C4D
Bond count 61
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) (2R,3R,4S,5R,8R,10R,13R,14S,15R,16R)-24-amino-18-bromo-3,4,8,10,14,15-hexahydroxy-7,9,11,25,26-pentaoxa-17,19,22-triaza-1-azonia-8,10-diphosphapentacyclo[18.3.1.1~2,5~.1~13,16~.0~17,21~]hexacosa-1(24),18,20,22-tetraene 8,10-dioxide (non-preferred name)

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1c2nc(Br)n3[C@@H]4O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]5O[C@H]([C@H](O)[C@@H]5O)[n+]1cnc23)[C@@H](O)[C@H]4O
SMILES (CACTVS) Nc1c2nc(Br)n3[CH]4O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]5O[CH]([CH](O)[CH]5O)[n+]1cnc23)[CH](O)[CH]4O
Stereo SMILES (OpenEye) c1nc2c3c([n+]1[C@H]4[C@@H]([C@@H]([C@H](O4)COP(=O)(OP(=O)(OC[C@@H]5[C@H]([C@H]([C@H](n2c(n3)Br)O5)O)O)O)O)O)O)N
InChI descriptor InChI=1S/C15H20BrN5O13P2/c16-15-19-6-11(17)20-3-18-12(6)21(15)14-10(25)8(23)5(33-14)2-31-36(28,29)34-35(26,27)30-1-4-7(22)9(24)13(20)32-4/h3-5,7-10,13-14,17,22-25H,1-2H2,(H2,26,27,28,29)/p-1/t4-,5-,7-,8-,9-,10-,13-,14-/m1/s1
InChIKey descriptor WDGMEOAIDHHBSJ-AIKIOGRUSA-M

Status Information

Last modified 2020-06-17
Created 2011-09-07
Release status REL
Model PDB code 3ZWY
Processing site EBI