PDB Chemical Component CUB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CUB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C3Z C2Z 1.362  
C3Z C4Z 1.605  
C3Z H31 1.115  
C3Z H32 1.115  
C2Z C1Z 1.396  
C2Z H21 1.115  
C2Z H22 1.115  
C1Z NZ 1.450  
C1Z H11 1.115  
C1Z H12 1.115  
NZ CU 1.818  
NZ CZ 1.318  
MO S 2.356  
MO CZ 2.590  
MO OM2 1.986  
MO OM1 1.660  
S CZ 1.712  
CZ OM2 1.274  
C4Z H41 1.115  
C4Z H42 1.115  
C4Z H43 1.115  

Bond Angles for CUB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2Z C3Z C4Z 118.9  
C2Z C3Z H31 108.8  
C2Z C3Z H32 108.8  
C3Z C2Z C1Z 119.3  
C3Z C2Z H21 108.7  
C3Z C2Z H22 108.7  
C4Z C3Z H31 108.9  
C4Z C3Z H32 108.8  
C3Z C4Z H41 118.9  
C3Z C4Z H42 108.8  
C3Z C4Z H43 108.8  
H31 C3Z H32 101.2  
C1Z C2Z H21 108.6  
C1Z C2Z H22 108.6  
C2Z C1Z NZ 110.2  
C2Z C1Z H11 112.0  
C2Z C1Z H12 112.0  
H21 C2Z H22 101.4  
NZ C1Z H11 111.9  
NZ C1Z H12 111.9  
C1Z NZ CU 121.2  
C1Z NZ CZ 116.0  
H11 C1Z H12 98.5  
CU NZ CZ 117.4  
NZ CZ MO 174.4  
NZ CZ S 120.9  
NZ CZ OM2 128.1  
S MO CZ 40.1  
S MO OM2 68.8  
S MO OM1 113.1  
MO S CZ 77.3  
CZ MO OM2 28.6  
CZ MO OM1 113.1  
MO CZ S 62.5  
MO CZ OM2 48.4  
OM2 MO OM1 106.3  
MO OM2 CZ 103.0  
S CZ OM2 110.9  
H41 C4Z H42 108.8  
H41 C4Z H43 108.8  
H42 C4Z H43 101.3  

Torsion Angles for CUB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4Z C3Z C2Z H31 234.7  
C4Z C3Z C2Z H32 125.3  
C2Z C3Z C4Z H41 180.0  
C2Z C3Z C4Z H42 305.3  
C2Z C3Z C4Z H43 54.8  
H31 C3Z C2Z H32 250.6  
C1Z C2Z C3Z H21 234.8  
C1Z C2Z C3Z H22 125.2  
C3Z C2Z C1Z NZ 306.3  
C3Z C2Z C1Z H11 71.5  
C3Z C2Z C1Z H12 181.0  
H21 C2Z C3Z H22 250.4  
C2Z C3Z C4Z H31 125.2  
C2Z C3Z C4Z H32 234.8  
C4Z C3Z C2Z C1Z 194.8  
C4Z C3Z C2Z H21 320.1  
C4Z C3Z C2Z H22 69.6  
H31 C3Z C4Z H32 109.5  
H41 C4Z C3Z H42 234.7  
H41 C4Z C3Z H43 125.2  
H42 C4Z C3Z H43 250.5  
C2Z C3Z H31 C4Z 229.0  
C2Z C3Z H31 H32 114.5  
H31 C3Z C2Z C1Z 320.1  
H31 C3Z C2Z H21 85.4  
H31 C3Z C2Z H22 194.9  
C4Z C3Z H31 H32 245.4  
H31 C3Z C4Z H41 54.7  
H31 C3Z C4Z H42 180.0  
H31 C3Z C4Z H43 289.5  
C2Z C3Z H32 C4Z 131.0  
C2Z C3Z H32 H31 245.6  
H32 C3Z C2Z C1Z 69.6  
H32 C3Z C2Z H21 194.8  
H32 C3Z C2Z H22 304.4  
C4Z C3Z H32 H31 114.6  
H32 C3Z C4Z H41 305.2  
H32 C3Z C4Z H42 70.5  
H32 C3Z C4Z H43 180.0  
C1Z C2Z C3Z C4Z 194.8  
C1Z C2Z C3Z H31 320.1  
C1Z C2Z C3Z H32 69.6  
C3Z C2Z C1Z H21 125.3  
C3Z C2Z C1Z H22 234.8  
H21 C2Z C1Z H22 109.5  
NZ C1Z C2Z H11 234.8  
NZ C1Z C2Z H12 125.2  
C2Z C1Z NZ CU 135.4  
C2Z C1Z NZ CZ 288.8  
H11 C1Z C2Z H12 250.5  
H21 C2Z C3Z C4Z 320.1  
H21 C2Z C3Z H31 85.4  
H21 C2Z C3Z H32 194.8  
C3Z C2Z H21 C1Z 228.8  
C3Z C2Z H21 H22 114.4  
C1Z C2Z H21 H22 245.7  
H21 C2Z C1Z NZ 181.0  
H21 C2Z C1Z H11 306.2  
H21 C2Z C1Z H12 55.8  
H22 C2Z C3Z C4Z 69.6  
H22 C2Z C3Z H31 194.9  
H22 C2Z C3Z H32 304.4  
C3Z C2Z H22 C1Z 131.2  
C3Z C2Z H22 H21 245.5  
C1Z C2Z H22 H21 114.3  
H22 C2Z C1Z NZ 71.5  
H22 C2Z C1Z H11 196.7  
H22 C2Z C1Z H12 306.3  
NZ C1Z C2Z H21 181.0  
NZ C1Z C2Z H22 71.5  
C2Z C1Z NZ H11 125.3  
C2Z C1Z NZ H12 234.7  
H11 C1Z NZ H12 109.4  
CU NZ C1Z CZ 206.6  
C1Z NZ CZ MO 50.3  
C1Z NZ CZ S 176.0  
C1Z NZ CZ OM2 1.7  
H11 C1Z C2Z H21 306.2  
H11 C1Z C2Z H22 196.7  
C2Z C1Z H11 NZ 235.7  
C2Z C1Z H11 H12 117.9  
NZ C1Z H11 H12 242.2  
H11 C1Z NZ CU 10.1  
H11 C1Z NZ CZ 163.5  
H12 C1Z C2Z H21 55.8  
H12 C1Z C2Z H22 306.3  
C2Z C1Z H12 NZ 124.3  
C2Z C1Z H12 H11 242.1  
NZ C1Z H12 H11 117.8  
H12 C1Z NZ CU 260.7  
H12 C1Z NZ CZ 54.0  
CU NZ C1Z H11 10.1  
CU NZ C1Z H12 260.7  
C1Z NZ CU CZ 153.0  
CU NZ CZ MO 204.8  
CU NZ CZ S 330.5  
CU NZ CZ OM2 156.1  
CZ NZ C1Z H11 163.5  
CZ NZ C1Z H12 54.0  
C1Z NZ CZ CU 205.5  
S MO CZ NZ 128.3  
MO S CZ NZ 185.2  
NZ CZ MO OM2 307.7  
NZ CZ MO OM1 29.3  
MO CZ NZ S 234.3  
MO CZ NZ OM2 48.6  
MO OM2 CZ NZ 174.3  
S CZ NZ OM2 174.4  
NZ CZ MO S 128.3  
NZ CZ S MO 185.2  
CZ MO S OM2 0.3  
CZ MO S OM1 261.0  
S MO CZ S 360.0  
S MO CZ OM2 180.5  
OM2 MO S OM1 260.7  
S MO OM2 CZ 0.4  
MO S CZ OM2 0.4  
S MO CZ OM1 98.9  
CZ MO S CZ -0.0  
OM2 MO CZ OM1 278.4  
CZ MO OM2 CZ -0.0  
S CZ MO OM2 179.5  
NZ CZ OM2 MO 174.3  
S MO OM2 OM1 109.0  
OM2 MO S CZ 359.7  
CZ MO OM2 OM1 108.6  
OM2 MO CZ S 179.5  
OM2 MO CZ OM2 360.0  
S CZ OM2 MO 359.5  
S MO OM1 CZ 316.2  
S MO OM1 OM2 286.6  
OM1 MO S CZ 99.0  
CZ MO OM1 OM2 330.4  
OM1 MO CZ S 261.1  
OM1 MO CZ OM2 81.6  
OM1 MO OM2 CZ 251.4  
NZ CZ S OM2 184.7  
CZ S MO CZ 360.0  
CZ S MO OM2 359.7  
CZ S MO OM1 99.0  
S CZ MO OM1 261.1  
MO CZ S OM2 359.6  
MO OM2 CZ S 359.5  
NZ CZ OM2 S 174.8  
OM2 CZ MO OM2 360.0  
OM2 CZ MO OM1 81.6  
MO CZ OM2 S 0.5  
CZ OM2 MO OM1 251.4  
H41 C4Z C3Z H31 54.7  
H41 C4Z C3Z H32 305.2  
C3Z C4Z H41 H42 125.3  
C3Z C4Z H41 H43 234.8  
H42 C4Z H41 H43 109.5  
H42 C4Z C3Z H31 180.0  
H42 C4Z C3Z H32 70.5  
C3Z C4Z H42 H41 229.0  
C3Z C4Z H42 H43 114.5  
H41 C4Z H42 H43 245.4  
H43 C4Z C3Z H31 289.5  
H43 C4Z C3Z H32 180.0  
C3Z C4Z H43 H41 130.9  
C3Z C4Z H43 H42 245.5  
H41 C4Z H43 H42 114.6