PDB Chemical Component CTH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CTH
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.455 |
1.469 |
| N |
H |
1.020 |
1.008 |
| N |
H2 |
1.020 |
1.009 |
| CA |
C |
1.550 |
1.507 |
| CA |
CB |
1.543 |
1.529 |
| CA |
HA |
1.114 |
1.091 |
| C |
O |
1.215 |
1.207 |
| C |
OXT |
1.348 |
1.342 |
| OXT |
HXT |
0.950 |
0.967 |
| CB |
CG2 |
1.502 |
1.529 |
| CB |
OG1 |
1.445 |
1.428 |
| CB |
HB |
1.115 |
1.089 |
| CG2 |
CL2 |
1.736 |
1.803 |
| CG2 |
HG22 |
1.114 |
1.091 |
| CG2 |
HG23 |
1.115 |
1.089 |
| OG1 |
HG1 |
0.950 |
0.966 |
Bond Angles for CTH
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.0 |
106.7 |
| CA |
N |
H2 |
112.4 |
106.7 |
| N |
CA |
C |
108.9 |
109.4 |
| N |
CA |
CB |
114.5 |
109.5 |
| N |
CA |
HA |
105.3 |
109.5 |
| H |
N |
H2 |
112.4 |
106.7 |
| C |
CA |
CB |
106.1 |
109.5 |
| C |
CA |
HA |
113.9 |
109.5 |
| CA |
C |
O |
121.8 |
120.1 |
| CA |
C |
OXT |
112.4 |
120.0 |
| CB |
CA |
HA |
108.3 |
109.5 |
| CA |
CB |
CG2 |
115.9 |
109.5 |
| CA |
CB |
OG1 |
110.1 |
109.5 |
| CA |
CB |
HB |
105.1 |
109.5 |
| O |
C |
OXT |
125.6 |
120.0 |
| C |
OXT |
HXT |
112.3 |
120.0 |
| CG2 |
CB |
OG1 |
111.6 |
109.5 |
| CG2 |
CB |
HB |
103.5 |
109.4 |
| CB |
CG2 |
CL2 |
116.1 |
109.5 |
| CB |
CG2 |
HG22 |
109.8 |
109.5 |
| CB |
CG2 |
HG23 |
109.8 |
109.5 |
| OG1 |
CB |
HB |
110.1 |
109.4 |
| CB |
OG1 |
HG1 |
110.1 |
106.8 |
| CL2 |
CG2 |
HG22 |
109.8 |
109.4 |
| CL2 |
CG2 |
HG23 |
109.8 |
109.5 |
| HG22 |
CG2 |
HG23 |
100.4 |
109.4 |
Torsion Angles for CTH
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
125.3 |
246.2 |
| C |
CA |
N |
CB |
118.6 |
120.0 |
| C |
CA |
N |
HA |
237.5 |
240.0 |
| N |
CA |
C |
O |
332.2 |
330.0 |
| N |
CA |
C |
OXT |
157.5 |
150.0 |
| CB |
CA |
N |
HA |
118.9 |
120.1 |
| N |
CA |
CB |
CG2 |
301.9 |
300.0 |
| N |
CA |
CB |
OG1 |
69.8 |
60.0 |
| N |
CA |
CB |
HB |
188.3 |
180.0 |
| CA |
N |
H |
H2 |
234.7 |
113.8 |
| H |
N |
CA |
C |
180.0 |
60.0 |
| H |
N |
CA |
CB |
61.4 |
300.1 |
| H |
N |
CA |
HA |
302.6 |
180.0 |
| CA |
N |
H2 |
H |
123.4 |
246.2 |
| H2 |
N |
CA |
C |
54.7 |
173.8 |
| H2 |
N |
CA |
CB |
296.1 |
53.8 |
| H2 |
N |
CA |
HA |
177.2 |
293.8 |
| C |
CA |
N |
H |
180.0 |
60.0 |
| C |
CA |
N |
H2 |
54.7 |
173.8 |
| N |
CA |
C |
CB |
236.3 |
240.0 |
| N |
CA |
C |
HA |
117.2 |
120.0 |
| CB |
CA |
C |
HA |
241.0 |
239.9 |
| C |
CA |
CB |
CG2 |
181.7 |
180.0 |
| C |
CA |
CB |
OG1 |
309.6 |
300.0 |
| C |
CA |
CB |
HB |
68.1 |
60.0 |
| O |
C |
CA |
OXT |
174.7 |
179.9 |
| CA |
C |
OXT |
HXT |
180.0 |
179.9 |
| CB |
CA |
N |
H |
61.4 |
300.1 |
| CB |
CA |
N |
H2 |
296.1 |
53.8 |
| N |
CA |
CB |
C |
120.2 |
119.9 |
| N |
CA |
CB |
HA |
242.8 |
240.0 |
| C |
CA |
CB |
HA |
122.6 |
120.0 |
| CB |
CA |
C |
O |
96.0 |
89.9 |
| CB |
CA |
C |
OXT |
281.3 |
270.0 |
| CG2 |
CB |
CA |
OG1 |
232.1 |
240.0 |
| CG2 |
CB |
CA |
HB |
113.6 |
120.0 |
| CA |
CB |
CG2 |
CL2 |
80.0 |
180.0 |
| CA |
CB |
CG2 |
HG22 |
205.2 |
300.0 |
| CA |
CB |
CG2 |
HG23 |
314.7 |
60.0 |
| OG1 |
CB |
CA |
HB |
241.5 |
240.0 |
| CA |
CB |
OG1 |
HG1 |
180.1 |
300.0 |
| HA |
CA |
N |
H |
302.6 |
180.0 |
| HA |
CA |
N |
H2 |
177.2 |
293.8 |
| N |
CA |
HA |
C |
240.7 |
240.1 |
| N |
CA |
HA |
CB |
122.9 |
120.0 |
| C |
CA |
HA |
CB |
242.2 |
240.0 |
| HA |
CA |
C |
O |
215.0 |
210.0 |
| HA |
CA |
C |
OXT |
40.3 |
30.0 |
| HA |
CA |
CB |
CG2 |
59.1 |
60.0 |
| HA |
CA |
CB |
OG1 |
187.0 |
180.0 |
| HA |
CA |
CB |
HB |
305.5 |
300.0 |
| O |
C |
CA |
CB |
96.0 |
89.9 |
| O |
C |
CA |
HA |
215.0 |
210.0 |
| CA |
C |
O |
OXT |
186.0 |
180.1 |
| O |
C |
OXT |
HXT |
5.5 |
360.0 |
| OXT |
C |
CA |
CB |
281.3 |
270.0 |
| OXT |
C |
CA |
HA |
40.3 |
30.0 |
| CA |
C |
OXT |
O |
174.5 |
179.9 |
| CG2 |
CB |
CA |
HA |
59.1 |
60.0 |
| CA |
CB |
CG2 |
OG1 |
127.1 |
120.0 |
| CA |
CB |
CG2 |
HB |
245.5 |
240.0 |
| OG1 |
CB |
CG2 |
HB |
118.3 |
120.0 |
| CG2 |
CB |
OG1 |
HG1 |
310.2 |
60.0 |
| CL2 |
CG2 |
CB |
HG22 |
234.7 |
240.0 |
| CL2 |
CG2 |
CB |
HG23 |
125.2 |
120.0 |
| HG22 |
CG2 |
CB |
HG23 |
250.5 |
240.0 |
| OG1 |
CB |
CA |
HA |
187.0 |
180.0 |
| CA |
CB |
OG1 |
CG2 |
229.8 |
240.0 |
| CA |
CB |
OG1 |
HB |
115.5 |
120.0 |
| CG2 |
CB |
OG1 |
HB |
245.7 |
240.1 |
| OG1 |
CB |
CG2 |
CL2 |
312.8 |
60.0 |
| OG1 |
CB |
CG2 |
HG22 |
78.1 |
180.0 |
| OG1 |
CB |
CG2 |
HG23 |
187.6 |
300.0 |
| HB |
CB |
CA |
HA |
305.5 |
300.0 |
| CA |
CB |
HB |
CG2 |
122.0 |
120.0 |
| CA |
CB |
HB |
OG1 |
241.4 |
240.0 |
| CG2 |
CB |
HB |
OG1 |
119.4 |
120.0 |
| HB |
CB |
CG2 |
CL2 |
194.5 |
300.1 |
| HB |
CB |
CG2 |
HG22 |
319.7 |
60.0 |
| HB |
CB |
CG2 |
HG23 |
69.3 |
180.0 |
| HB |
CB |
OG1 |
HG1 |
64.6 |
179.9 |
| CL2 |
CG2 |
CB |
OG1 |
312.8 |
60.0 |
| CL2 |
CG2 |
CB |
HB |
194.5 |
300.1 |
| CB |
CG2 |
CL2 |
HG22 |
125.3 |
120.0 |
| CB |
CG2 |
CL2 |
HG23 |
234.8 |
240.0 |
| HG22 |
CG2 |
CL2 |
HG23 |
109.5 |
119.9 |
| HG22 |
CG2 |
CB |
OG1 |
78.1 |
180.0 |
| HG22 |
CG2 |
CB |
HB |
319.7 |
60.0 |
| CB |
CG2 |
HG22 |
CL2 |
231.2 |
239.9 |
| CB |
CG2 |
HG22 |
HG23 |
115.6 |
120.0 |
| CL2 |
CG2 |
HG22 |
HG23 |
244.4 |
240.1 |
| HG23 |
CG2 |
CB |
OG1 |
187.6 |
300.0 |
| HG23 |
CG2 |
CB |
HB |
69.3 |
180.0 |
| CB |
CG2 |
HG23 |
CL2 |
128.7 |
120.1 |
| CB |
CG2 |
HG23 |
HG22 |
244.4 |
240.0 |
| CL2 |
CG2 |
HG23 |
HG22 |
115.6 |
119.9 |
| HG1 |
OG1 |
CB |
HB |
64.6 |
179.9 |