PDB Chemical Component CT1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CT1

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.534 1.530
C1 H11 1.100 1.090
C1 H12A 1.100 1.090
C1 H13 1.100 1.090
C2 C3 1.568 1.531
C2 H21 1.100 1.089
C2 H22 1.100 1.090
C3 C4 1.550 1.529
C3 H31 1.100 1.089
C3 H32 1.100 1.090
C4 C5 1.552 1.531
C4 H41 1.100 1.089
C4 H42 1.100 1.090
O7 C6 1.400 1.207
N8 C9 1.340 1.348
N8 C5 1.467 1.464
N8 HN8 0.999 0.971
C9 O10 1.212 1.215
C9 O11 1.335 1.346
O11 C12 1.434 1.451
C12 C13 1.562 1.530
C12 C20 1.560 1.531
C12 H12 1.100 1.090
C13 C14 1.536 1.507
C13 H131 1.100 1.090
C13 H132 1.100 1.090
C14 C15 1.389 1.383
C14 C19 1.399 1.382
C15 C16 1.394 1.382
C15 H15 1.080 1.080
C16 C17 1.391 1.382
C16 H16 1.080 1.080
C17 C18 1.384 1.383
C17 H17 1.080 1.080
C18 C19 1.390 1.383
C18 H18 1.080 1.079
C19 H19 1.080 1.080
C20 C21 1.520 1.530
C20 C22 1.519 1.529
C20 H20 1.100 1.090
C21 H211 1.100 1.090
C21 H212 1.100 1.091
C21 H213 1.100 1.089
C22 H221 1.100 1.090
C22 H222 1.100 1.090
C22 H223 1.100 1.090
C6 C5 1.557 1.508
C6 H6 1.080 1.080
C5 H5 1.100 1.089

Bond Angles for CT1

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 H11 109.5 109.5
C2 C1 H12A 109.5 109.5
C2 C1 H13 109.5 109.5
C1 C2 C3 109.7 109.4
C1 C2 H21 109.3 109.5
C1 C2 H22 109.4 109.5
H11 C1 H12A 109.5 109.4
H11 C1 H13 109.4 109.6
H12A C1 H13 109.5 109.5
C3 C2 H21 109.3 109.5
C3 C2 H22 109.4 109.4
C2 C3 C4 109.6 109.4
C2 C3 H31 109.4 109.5
C2 C3 H32 109.4 109.4
H21 C2 H22 109.7 109.5
C4 C3 H31 109.4 109.5
C4 C3 H32 109.4 109.5
C3 C4 C5 110.2 109.4
C3 C4 H41 109.1 109.5
C3 C4 H42 109.2 109.5
H31 C3 H32 109.6 109.5
C5 C4 H41 109.1 109.5
C5 C4 H42 109.2 109.4
C4 C5 N8 108.3 109.5
C4 C5 C6 108.1 109.5
C4 C5 H5 111.0 109.5
H41 C4 H42 110.0 109.5
O7 C6 C5 109.0 120.0
O7 C6 H6 125.5 120.1
C9 N8 C5 120.4 120.0
C9 N8 HN8 119.8 120.0
N8 C9 O10 119.8 120.0
N8 C9 O11 120.0 120.0
C5 N8 HN8 119.8 120.0
N8 C5 C6 109.2 109.5
N8 C5 H5 110.0 109.5
O10 C9 O11 120.2 120.0
C9 O11 C12 113.4 120.0
O11 C12 C13 109.5 109.5
O11 C12 C20 108.6 109.5
O11 C12 H12 109.6 109.5
C13 C12 C20 108.0 109.5
C13 C12 H12 110.2 109.5
C12 C13 C14 111.6 109.5
C12 C13 H131 108.3 109.4
C12 C13 H132 108.8 109.5
C20 C12 H12 111.0 109.5
C12 C20 C21 109.1 109.5
C12 C20 C22 110.6 109.5
C12 C20 H20 108.9 109.4
C14 C13 H131 108.3 109.5
C14 C13 H132 108.8 109.5
C13 C14 C15 119.9 120.0
C13 C14 C19 120.3 120.0
H131 C13 H132 111.1 109.4
C15 C14 C19 119.8 120.0
C14 C15 C16 119.8 120.0
C14 C15 H15 120.1 120.0
C14 C19 C18 120.2 120.0
C14 C19 H19 119.9 120.0
C16 C15 H15 120.1 120.0
C15 C16 C17 120.1 120.0
C15 C16 H16 120.0 120.0
C17 C16 H16 119.9 120.0
C16 C17 C18 120.3 120.0
C16 C17 H17 119.9 120.0
C18 C17 H17 119.8 120.0
C17 C18 C19 119.8 120.0
C17 C18 H18 120.1 120.1
C19 C18 H18 120.1 120.0
C18 C19 H19 119.9 119.9
C21 C20 C22 109.2 109.5
C21 C20 H20 110.3 109.5
C20 C21 H211 109.5 109.4
C20 C21 H212 109.4 109.4
C20 C21 H213 109.5 109.5
C22 C20 H20 108.7 109.5
C20 C22 H221 109.4 109.5
C20 C22 H222 109.4 109.5
C20 C22 H223 109.5 109.5
H211 C21 H212 109.5 109.4
H211 C21 H213 109.5 109.6
H212 C21 H213 109.5 109.5
H221 C22 H222 109.5 109.5
H221 C22 H223 109.4 109.4
H222 C22 H223 109.5 109.5
C5 C6 H6 125.5 120.0
C6 C5 H5 110.2 109.4

Torsion Angles for CT1

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H11 C1 C2 H12A 120.0 240.1
H11 C1 C2 H13 240.0 120.1
H12A C1 C2 H13 120.1 240.0
C3 C2 C1 H21 119.9 240.0
C3 C2 C1 H22 240.0 119.9
C1 C2 C3 C4 95.2 180.0
C1 C2 C3 H31 335.3 300.0
C1 C2 C3 H32 215.2 60.0
H21 C2 C1 H22 120.1 239.9
C2 C1 H11 H12A 240.0 120.0
C2 C1 H11 H13 120.0 240.0
H11 C1 C2 C3 70.5 60.0
H11 C1 C2 H21 310.7 180.0
H11 C1 C2 H22 190.6 300.1
H12A C1 H11 H13 240.0 120.0
C2 C1 H12A H11 120.0 240.0
C2 C1 H12A H13 239.9 120.0
H12A C1 C2 C3 310.6 180.0
H12A C1 C2 H21 190.7 300.0
H12A C1 C2 H22 70.6 60.0
H11 C1 H12A H13 119.9 239.9
C2 C1 H13 H11 240.0 120.1
C2 C1 H13 H12A 120.0 240.0
H13 C1 C2 C3 190.5 299.9
H13 C1 C2 H21 70.6 59.9
H13 C1 C2 H22 310.5 180.0
H11 C1 H13 H12A 240.0 120.0
C3 C2 C1 H11 70.5 60.0
C3 C2 C1 H12A 310.6 180.0
C3 C2 C1 H13 190.5 299.9
C1 C2 C3 H21 240.1 120.0
C1 C2 C3 H22 120.0 240.1
H21 C2 C3 H22 239.9 120.0
C4 C3 C2 H31 119.9 240.0
C4 C3 C2 H32 240.0 120.0
C2 C3 C4 C5 150.4 180.0
C2 C3 C4 H41 30.7 300.0
C2 C3 C4 H42 270.4 60.0
H31 C3 C2 H32 120.1 240.0
H21 C2 C1 H11 310.7 180.0
H21 C2 C1 H12A 190.7 300.0
H21 C2 C1 H13 70.6 59.9
C1 C2 H21 C3 120.2 240.0
C1 C2 H21 H22 240.1 120.0
C3 C2 H21 H22 119.9 240.0
H21 C2 C3 C4 215.1 60.0
H21 C2 C3 H31 95.2 180.0
H21 C2 C3 H32 335.1 300.0
H22 C2 C1 H11 190.6 300.1
H22 C2 C1 H12A 70.6 60.0
H22 C2 C1 H13 310.5 180.0
C1 C2 H22 C3 239.8 119.9
C1 C2 H22 H21 119.9 240.0
C3 C2 H22 H21 240.1 120.0
H22 C2 C3 C4 335.2 299.9
H22 C2 C3 H31 215.3 60.0
H22 C2 C3 H32 95.2 180.0
C4 C3 C2 H21 215.1 60.0
C4 C3 C2 H22 335.2 299.9
C2 C3 C4 H31 240.0 120.0
C2 C3 C4 H32 120.0 240.1
H31 C3 C4 H32 239.9 120.1
C5 C4 C3 H41 119.7 240.0
C5 C4 C3 H42 240.0 120.0
C3 C4 C5 N8 299.9 295.0
C3 C4 C5 C6 181.7 175.0
C3 C4 C5 H5 60.8 55.1
H41 C4 C3 H42 120.3 240.0
H31 C3 C2 H21 95.2 180.0
H31 C3 C2 H22 215.3 60.0
C2 C3 H31 C4 120.1 240.0
C2 C3 H31 H32 240.0 119.9
C4 C3 H31 H32 120.0 239.9
H31 C3 C4 C5 270.4 60.0
H31 C3 C4 H41 150.7 180.0
H31 C3 C4 H42 30.4 300.0
H32 C3 C2 H21 335.1 300.0
H32 C3 C2 H22 95.2 180.0
C2 C3 H32 C4 239.9 119.9
C2 C3 H32 H31 120.0 240.0
C4 C3 H32 H31 240.1 120.1
H32 C3 C4 C5 30.4 299.9
H32 C3 C4 H41 270.7 59.9
H32 C3 C4 H42 150.4 179.9
C5 C4 C3 H31 270.4 60.0
C5 C4 C3 H32 30.4 299.9
C3 C4 C5 H41 240.3 120.0
C3 C4 C5 H42 120.0 240.0
H41 C4 C5 H42 239.7 120.0
O7 C6 C5 C4 319.8 120.0
C9 N8 C5 C4 137.5 155.0
C4 C5 N8 HN8 317.5 335.1
N8 C5 C4 C6 118.2 120.0
N8 C5 C4 H5 239.2 239.9
C4 C5 C6 H6 139.8 300.1
C6 C5 C4 H5 121.0 119.9
H41 C4 C3 H31 150.7 180.0
H41 C4 C3 H32 270.7 59.9
C3 C4 H41 C5 120.4 240.0
C3 C4 H41 H42 240.2 120.1
C5 C4 H41 H42 119.8 240.0
H41 C4 C5 N8 59.7 175.0
H41 C4 C5 C6 301.5 55.0
H41 C4 C5 H5 180.5 295.0
H42 C4 C3 H31 30.4 300.0
H42 C4 C3 H32 150.4 179.9
C3 C4 H42 C5 239.5 120.0
C3 C4 H42 H41 119.7 239.9
C5 C4 H42 H41 240.3 120.0
H42 C4 C5 N8 180.0 55.0
H42 C4 C5 C6 61.8 295.0
H42 C4 C5 H5 300.8 175.1
C4 C5 C6 O7 319.8 120.0
N8 C5 C6 O7 202.1 360.0
C5 C6 O7 H6 180.0 180.1
O7 C6 C5 H5 81.3 239.9
C4 C5 N8 C9 137.5 155.0
C5 N8 C9 HN8 180.0 180.1
C9 N8 C5 C6 255.0 275.0
C9 N8 C5 H5 16.0 34.9
O10 C9 N8 O11 179.9 180.0
N8 C9 O11 C12 180.3 180.0
N8 C5 C4 H41 59.7 175.0
N8 C5 C4 H42 180.0 55.0
C4 C5 N8 C6 242.5 240.0
C4 C5 N8 H5 121.5 120.0
O7 C6 C5 N8 202.1 360.0
C9 N8 C5 HN8 180.0 179.9
C5 N8 C9 O10 351.7 0.0
C5 N8 C9 O11 171.8 180.0
N8 C5 C6 H6 22.1 180.1
C6 C5 N8 H5 239.0 240.0
C9 N8 HN8 C5 180.0 180.1
HN8 N8 C9 O10 171.7 179.9
HN8 N8 C9 O11 351.8 359.9
HN8 N8 C5 C6 75.1 95.1
HN8 N8 C5 H5 196.0 215.0
O10 C9 N8 C5 351.7 0.0
O10 C9 N8 HN8 171.7 179.9
N8 C9 O10 O11 180.1 180.0
O10 C9 O11 C12 0.4 0.0
O11 C9 N8 C5 171.8 180.0
O11 C9 N8 HN8 351.8 359.9
N8 C9 O11 O10 179.9 180.0
C9 O11 C12 C13 239.4 210.0
C9 O11 C12 C20 121.7 90.0
C9 O11 C12 H12 0.3 330.0
C13 C12 O11 C20 117.7 120.0
C13 C12 O11 H12 239.1 240.0
O11 C12 C13 C14 59.4 65.0
O11 C12 C13 H131 300.2 185.0
O11 C12 C13 H132 179.4 305.0
C20 C12 O11 H12 121.4 120.0
O11 C12 C20 C21 47.6 300.0
O11 C12 C20 C22 287.4 60.0
O11 C12 C20 H20 168.0 180.0
O11 C12 C13 C20 241.9 240.0
O11 C12 C13 H12 120.6 120.0
C20 C12 C13 H12 238.7 240.0
C13 C12 C20 C21 289.0 180.0
C13 C12 C20 C22 168.8 300.0
C13 C12 C20 H20 49.4 60.0
C14 C13 C12 H131 119.1 240.0
C14 C13 C12 H132 240.0 120.0
C12 C13 C14 C15 91.6 269.7
C12 C13 C14 C19 271.5 90.0
H131 C13 C12 H132 120.9 240.1
O11 C12 C20 C13 118.6 120.0
O11 C12 C20 H12 239.5 240.0
C13 C12 C20 H12 120.9 120.0
C20 C12 C13 C14 177.4 185.0
C20 C12 C13 H131 58.3 305.0
C20 C12 C13 H132 297.5 65.0
C21 C20 C12 C22 120.2 240.0
C21 C20 C12 H20 239.6 120.0
C12 C20 C21 H211 48.5 180.0
C12 C20 C21 H212 288.5 299.9
C12 C20 C21 H213 168.5 60.0
C22 C20 C12 H20 119.4 240.0
C12 C20 C22 H221 326.9 59.9
C12 C20 C22 H222 206.9 180.0
C12 C20 C22 H223 86.9 300.0
O11 C12 H12 C13 239.5 240.0
O11 C12 H12 C20 120.0 120.0
C13 C12 H12 C20 240.4 240.0
H12 C12 C13 C14 298.8 305.0
H12 C12 C13 H131 179.7 65.0
H12 C12 C13 H132 58.8 185.0
H12 C12 C20 C21 168.1 60.0
H12 C12 C20 C22 47.9 180.0
H12 C12 C20 H20 288.5 300.0
C14 C13 C12 C20 177.4 185.0
C14 C13 C12 H12 298.8 305.0
C12 C13 C14 H131 240.9 120.0
C12 C13 C14 H132 120.0 240.0
H131 C13 C14 H132 239.1 120.0
C15 C14 C13 C19 180.0 179.7
C13 C14 C15 C16 179.9 179.8
C13 C14 C15 H15 360.0 0.2
C13 C14 C19 C18 180.0 180.0
C13 C14 C19 H19 0.0 0.0
H131 C13 C12 C20 58.3 305.0
H131 C13 C12 H12 179.7 65.0
C12 C13 H131 C14 121.2 240.0
C12 C13 H131 H132 240.6 119.9
C14 C13 H131 H132 119.4 240.0
H131 C13 C14 C15 210.7 149.7
H131 C13 C14 C19 30.7 330.0
H132 C13 C12 C20 297.5 65.0
H132 C13 C12 H12 58.8 185.0
C12 C13 H132 C14 238.3 120.0
C12 C13 H132 H131 119.1 240.1
C14 C13 H132 H131 240.9 120.0
H132 C13 C14 C15 331.6 29.7
H132 C13 C14 C19 151.5 210.0
C15 C14 C13 H131 210.7 149.7
C15 C14 C13 H132 331.6 29.7
C13 C14 C15 C19 180.0 180.3
C15 C14 C19 C18 360.0 0.2
C15 C14 C19 H19 180.0 180.3
C16 C15 C14 H15 180.0 179.6
C14 C15 C16 C17 0.2 0.4
C14 C15 C16 H16 180.2 180.3
C19 C14 C13 H131 30.7 330.0
C19 C14 C13 H132 151.5 210.0
C13 C14 C19 C15 180.0 179.7
C19 C14 C15 C16 360.0 359.5
C19 C14 C15 H15 180.0 180.0
C17 C18 C19 C14 360.0 0.1
C14 C19 C18 H18 180.0 180.0
C18 C19 C14 H19 180.0 179.9
C16 C15 C14 C19 360.0 359.5
C14 C15 C16 H15 180.0 180.4
C17 C16 C15 H16 180.0 180.1
C15 C16 C17 C18 359.8 359.9
C15 C16 C17 H17 179.8 179.8
H15 C15 C14 C19 180.0 180.0
C14 C15 H15 C16 180.0 179.6
H15 C15 C16 C17 180.1 180.0
H15 C15 C16 H16 0.1 359.9
C17 C16 C15 H15 180.1 180.0
C15 C16 C17 H16 180.0 179.9
C18 C17 C16 H17 180.0 180.1
C16 C17 C18 C19 0.1 359.9
C16 C17 C18 H18 180.1 180.0
H16 C16 C15 H15 0.1 359.9
C15 C16 H16 C17 180.0 180.1
H16 C16 C17 C18 179.8 180.0
H16 C16 C17 H17 359.8 359.9
C14 C19 C18 C17 360.0 0.1
C18 C17 C16 H16 179.8 180.0
C16 C17 C18 H17 180.0 179.9
C19 C18 C17 H18 180.0 179.9
C17 C18 C19 H19 180.0 180.0
H17 C17 C16 H16 359.8 359.9
C16 C17 H17 C18 180.0 180.1
H17 C17 C18 C19 180.1 179.9
H17 C17 C18 H18 0.1 0.0
C14 C19 C18 H19 180.0 180.1
C19 C18 C17 H17 180.1 179.9
C17 C18 C19 H18 180.0 180.1
H18 C18 C17 H17 0.1 0.0
C17 C18 H18 C19 180.0 179.9
H18 C18 C19 H19 360.0 359.9
C14 C19 H19 C18 180.0 179.9
H19 C19 C18 H18 360.0 359.9
C21 C20 C12 H12 168.1 60.0
C12 C20 C21 C22 239.0 120.0
C12 C20 C21 H20 119.5 240.0
C22 C20 C21 H20 240.6 120.0
C21 C20 C22 H221 206.8 179.9
C21 C20 C22 H222 86.8 300.0
C21 C20 C22 H223 326.8 60.0
H211 C21 C20 H212 120.0 240.1
H211 C21 C20 H213 240.0 120.1
H212 C21 C20 H213 120.0 240.0
C22 C20 C12 H12 47.9 180.0
C12 C20 C22 C21 120.1 240.0
C12 C20 C22 H20 240.5 120.0
C21 C20 C22 H20 120.4 240.0
C22 C20 C21 H211 169.5 60.0
C22 C20 C21 H212 49.6 179.9
C22 C20 C21 H213 289.5 299.9
H221 C22 C20 H222 120.0 239.9
H221 C22 C20 H223 240.0 119.9
H222 C22 C20 H223 120.0 240.0
H20 C20 C12 H12 288.5 300.0
C12 C20 H20 C21 240.3 120.0
C12 C20 H20 C22 120.6 240.0
C21 C20 H20 C22 240.3 120.0
H20 C20 C21 H211 289.0 300.0
H20 C20 C21 H212 169.0 59.9
H20 C20 C21 H213 49.0 179.9
H20 C20 C22 H221 86.4 300.0
H20 C20 C22 H222 326.4 60.0
H20 C20 C22 H223 206.4 180.1
H211 C21 C20 C22 169.5 60.0
H211 C21 C20 H20 289.0 300.0
C20 C21 H211 H212 240.0 119.9
C20 C21 H211 H213 120.0 240.0
H212 C21 H211 H213 240.0 120.0
H212 C21 C20 C22 49.6 179.9
H212 C21 C20 H20 169.0 59.9
C20 C21 H212 H211 120.0 240.1
C20 C21 H212 H213 240.0 120.0
H211 C21 H212 H213 120.0 239.9
H213 C21 C20 C22 289.5 299.9
H213 C21 C20 H20 49.0 179.9
C20 C21 H213 H211 240.0 120.0
C20 C21 H213 H212 120.0 240.0
H211 C21 H213 H212 240.0 120.0
H221 C22 C20 H20 86.4 300.0
C20 C22 H221 H222 240.0 120.1
C20 C22 H221 H223 120.0 240.1
H222 C22 H221 H223 240.0 120.0
H222 C22 C20 H20 326.4 60.0
C20 C22 H222 H221 120.0 240.0
C20 C22 H222 H223 240.0 120.0
H221 C22 H222 H223 120.0 240.0
H223 C22 C20 H20 206.4 180.1
C20 C22 H223 H221 240.0 119.9
C20 C22 H223 H222 120.0 240.0
H221 C22 H223 H222 240.0 120.0
C6 C5 C4 H41 301.5 55.0
C6 C5 C4 H42 61.8 295.0
C4 C5 C6 N8 117.6 120.0
C4 C5 C6 H5 238.5 240.0
O7 C6 C5 H6 180.0 179.9
C6 C5 N8 HN8 75.1 95.1
N8 C5 C6 H5 120.9 120.0
O7 C6 H6 C5 180.0 180.1
H6 C6 C5 H5 261.2 60.0
H5 C5 C4 H41 180.5 295.0
H5 C5 C4 H42 300.8 175.1
C4 C5 H5 N8 240.1 239.9
C4 C5 H5 C6 119.7 120.0
H5 C5 N8 HN8 196.0 215.0
N8 C5 H5 C6 239.6 240.0
H5 C5 C6 H6 261.2 60.0