PDB Chemical Component CS1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CS1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O |
C |
1.241 |
1.208 |
| C |
OXT |
1.415 |
1.343 |
| C |
CA |
1.514 |
1.507 |
| CA |
N |
1.439 |
1.469 |
| CA |
CB |
1.525 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| N |
H |
1.000 |
1.008 |
| N |
H2 |
1.000 |
1.009 |
| CB |
SG |
1.778 |
1.814 |
| CB |
HB2 |
1.100 |
1.091 |
| CB |
HB3 |
1.100 |
1.091 |
| SG |
SD |
2.016 |
2.049 |
| SD |
CE |
1.714 |
1.762 |
| CE |
C5 |
1.394 |
1.387 |
| CE |
C1 |
1.382 |
1.395 |
| C5 |
C4 |
1.395 |
1.382 |
| C5 |
H5 |
1.080 |
1.080 |
| C4 |
C3 |
1.385 |
1.383 |
| C4 |
H4 |
1.080 |
1.080 |
| C3 |
C2 |
1.390 |
1.383 |
| C3 |
H3 |
1.080 |
1.080 |
| C2 |
C1 |
1.397 |
1.387 |
| C2 |
HC2 |
1.080 |
1.079 |
| C1 |
N1 |
1.353 |
1.399 |
| N1 |
HN11 |
1.000 |
0.971 |
| N1 |
HN12 |
1.000 |
0.969 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for CS1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O |
C |
OXT |
117.1 |
120.0 |
| O |
C |
CA |
121.5 |
120.0 |
| CA |
C |
OXT |
121.4 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| C |
CA |
N |
109.3 |
109.5 |
| C |
CA |
CB |
110.6 |
109.5 |
| C |
CA |
HA |
109.3 |
109.4 |
| N |
CA |
CB |
110.9 |
109.4 |
| N |
CA |
HA |
109.0 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| CB |
CA |
HA |
107.7 |
109.5 |
| CA |
CB |
SG |
106.7 |
109.5 |
| CA |
CB |
HB2 |
110.4 |
109.4 |
| CA |
CB |
HB3 |
111.1 |
109.5 |
| H |
N |
H2 |
109.5 |
111.0 |
| SG |
CB |
HB2 |
110.4 |
109.5 |
| SG |
CB |
HB3 |
111.0 |
109.5 |
| CB |
SG |
SD |
113.8 |
103.0 |
| HB2 |
CB |
HB3 |
107.3 |
109.4 |
| SG |
SD |
CE |
105.5 |
103.0 |
| SD |
CE |
C5 |
121.8 |
120.1 |
| SD |
CE |
C1 |
119.9 |
120.1 |
| C5 |
CE |
C1 |
118.3 |
119.8 |
| CE |
C5 |
C4 |
121.7 |
120.0 |
| CE |
C5 |
H5 |
119.1 |
120.0 |
| CE |
C1 |
C2 |
120.4 |
119.8 |
| CE |
C1 |
N1 |
119.0 |
120.1 |
| C4 |
C5 |
H5 |
119.1 |
120.0 |
| C5 |
C4 |
C3 |
119.5 |
120.2 |
| C5 |
C4 |
H4 |
120.3 |
119.9 |
| C3 |
C4 |
H4 |
120.3 |
119.9 |
| C4 |
C3 |
C2 |
119.2 |
120.2 |
| C4 |
C3 |
H3 |
120.4 |
119.9 |
| C2 |
C3 |
H3 |
120.4 |
119.9 |
| C3 |
C2 |
C1 |
120.8 |
120.0 |
| C3 |
C2 |
HC2 |
119.6 |
120.0 |
| C1 |
C2 |
HC2 |
119.6 |
120.0 |
| C2 |
C1 |
N1 |
120.6 |
120.1 |
| C1 |
N1 |
HN11 |
109.5 |
120.0 |
| C1 |
N1 |
HN12 |
109.5 |
120.0 |
| HN11 |
N1 |
HN12 |
109.4 |
120.0 |
Torsion Angles for CS1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
C |
O |
OXT |
182.2 |
180.2 |
| O |
C |
OXT |
HXT |
0.0 |
360.0 |
| O |
C |
CA |
N |
129.5 |
340.0 |
| O |
C |
CA |
CB |
251.9 |
100.0 |
| O |
C |
CA |
HA |
10.3 |
220.0 |
| O |
C |
OXT |
CA |
182.2 |
180.2 |
| OXT |
C |
CA |
N |
311.8 |
160.3 |
| OXT |
C |
CA |
CB |
74.2 |
280.3 |
| OXT |
C |
CA |
HA |
192.6 |
40.2 |
| O |
C |
CA |
OXT |
177.7 |
179.8 |
| CA |
C |
OXT |
HXT |
177.8 |
179.7 |
| N |
CA |
C |
CB |
237.6 |
240.0 |
| N |
CA |
C |
HA |
119.2 |
120.0 |
| C |
CA |
N |
H |
72.4 |
68.1 |
| C |
CA |
N |
H2 |
192.4 |
192.1 |
| CB |
CA |
C |
HA |
241.6 |
240.0 |
| C |
CA |
CB |
SG |
57.3 |
174.8 |
| C |
CA |
CB |
HB2 |
177.3 |
294.8 |
| C |
CA |
CB |
HB3 |
296.2 |
54.7 |
| N |
CA |
C |
OXT |
311.8 |
160.3 |
| C |
CA |
N |
CB |
122.2 |
120.0 |
| C |
CA |
N |
HA |
240.6 |
240.0 |
| CB |
CA |
N |
HA |
118.3 |
120.0 |
| N |
CA |
CB |
SG |
178.8 |
294.8 |
| N |
CA |
CB |
HB2 |
298.8 |
54.8 |
| N |
CA |
CB |
HB3 |
57.7 |
174.8 |
| H |
N |
CA |
H2 |
240.0 |
236.0 |
| CB |
CA |
C |
OXT |
74.2 |
280.3 |
| C |
CA |
CB |
N |
238.5 |
240.0 |
| C |
CA |
CB |
HA |
119.4 |
120.0 |
| N |
CA |
CB |
HA |
240.9 |
240.0 |
| CB |
CA |
N |
H |
310.2 |
308.1 |
| CB |
CA |
N |
H2 |
70.2 |
72.1 |
| SG |
CB |
CA |
HB2 |
240.0 |
240.0 |
| SG |
CB |
CA |
HB3 |
121.1 |
120.1 |
| CA |
CB |
SG |
SD |
278.6 |
77.2 |
| HB2 |
CB |
CA |
HB3 |
241.1 |
240.1 |
| HA |
CA |
C |
OXT |
192.6 |
40.2 |
| C |
CA |
HA |
N |
119.5 |
120.0 |
| C |
CA |
HA |
CB |
239.8 |
240.0 |
| N |
CA |
HA |
CB |
120.4 |
120.0 |
| HA |
CA |
N |
H |
191.8 |
188.1 |
| HA |
CA |
N |
H2 |
311.8 |
312.2 |
| HA |
CA |
CB |
SG |
297.9 |
54.8 |
| HA |
CA |
CB |
HB2 |
57.9 |
174.8 |
| HA |
CA |
CB |
HB3 |
176.8 |
294.7 |
| H |
N |
CA |
CB |
310.2 |
308.1 |
| H |
N |
CA |
HA |
191.8 |
188.1 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H2 |
N |
CA |
CB |
70.2 |
72.1 |
| H2 |
N |
CA |
HA |
311.8 |
312.2 |
| CA |
N |
H2 |
H |
239.9 |
236.0 |
| SG |
CB |
CA |
HA |
297.9 |
54.8 |
| CA |
CB |
SG |
HB2 |
120.0 |
120.0 |
| CA |
CB |
SG |
HB3 |
238.9 |
239.9 |
| HB2 |
CB |
SG |
HB3 |
118.9 |
120.0 |
| CB |
SG |
SD |
CE |
282.1 |
85.0 |
| HB2 |
CB |
CA |
HA |
57.9 |
174.8 |
| CA |
CB |
HB2 |
SG |
242.3 |
240.0 |
| CA |
CB |
HB2 |
HB3 |
121.2 |
120.0 |
| SG |
CB |
HB2 |
HB3 |
238.9 |
240.0 |
| HB2 |
CB |
SG |
SD |
158.6 |
317.2 |
| HB3 |
CB |
CA |
HA |
176.8 |
294.7 |
| CA |
CB |
HB3 |
SG |
118.5 |
120.1 |
| CA |
CB |
HB3 |
HB2 |
239.2 |
240.1 |
| SG |
CB |
HB3 |
HB2 |
120.7 |
120.0 |
| HB3 |
CB |
SG |
SD |
39.7 |
197.2 |
| SD |
SG |
CB |
HB2 |
158.6 |
317.2 |
| SD |
SG |
CB |
HB3 |
39.7 |
197.2 |
| SG |
SD |
CE |
C5 |
76.5 |
360.0 |
| SG |
SD |
CE |
C1 |
255.8 |
179.7 |
| C5 |
CE |
SD |
C1 |
180.7 |
180.3 |
| SD |
CE |
C5 |
C4 |
181.5 |
180.0 |
| SD |
CE |
C5 |
H5 |
1.5 |
359.9 |
| SD |
CE |
C1 |
C2 |
178.9 |
179.7 |
| SD |
CE |
C1 |
N1 |
0.1 |
0.0 |
| SD |
CE |
C5 |
C1 |
179.3 |
179.7 |
| C5 |
CE |
C1 |
C2 |
358.3 |
359.4 |
| C5 |
CE |
C1 |
N1 |
179.4 |
179.7 |
| C4 |
C5 |
CE |
H5 |
180.0 |
180.1 |
| CE |
C5 |
C4 |
C3 |
358.0 |
0.1 |
| CE |
C5 |
C4 |
H4 |
178.0 |
179.9 |
| SD |
CE |
C1 |
C5 |
180.7 |
180.3 |
| C1 |
CE |
C5 |
C4 |
2.2 |
0.3 |
| C1 |
CE |
C5 |
H5 |
182.2 |
180.2 |
| C3 |
C2 |
C1 |
CE |
1.1 |
0.6 |
| CE |
C1 |
C2 |
HC2 |
181.1 |
180.3 |
| C2 |
C1 |
CE |
N1 |
178.9 |
179.7 |
| CE |
C1 |
N1 |
HN11 |
13.6 |
360.0 |
| CE |
C1 |
N1 |
HN12 |
133.5 |
180.0 |
| C4 |
C5 |
CE |
C1 |
2.2 |
0.3 |
| CE |
C5 |
C4 |
H5 |
180.0 |
179.9 |
| C3 |
C4 |
C5 |
H4 |
180.0 |
180.2 |
| C5 |
C4 |
C3 |
C2 |
1.2 |
359.9 |
| C5 |
C4 |
C3 |
H3 |
181.3 |
180.0 |
| H5 |
C5 |
CE |
C1 |
182.2 |
180.2 |
| CE |
C5 |
H5 |
C4 |
180.0 |
180.1 |
| H5 |
C5 |
C4 |
C3 |
178.1 |
180.1 |
| H5 |
C5 |
C4 |
H4 |
358.1 |
360.0 |
| C3 |
C4 |
C5 |
H5 |
178.1 |
180.1 |
| C5 |
C4 |
C3 |
H4 |
180.0 |
179.8 |
| C2 |
C3 |
C4 |
H3 |
180.0 |
179.9 |
| C4 |
C3 |
C2 |
C1 |
359.2 |
359.8 |
| C4 |
C3 |
C2 |
HC2 |
179.1 |
180.0 |
| H4 |
C4 |
C5 |
H5 |
358.1 |
360.0 |
| C5 |
C4 |
H4 |
C3 |
180.0 |
180.2 |
| H4 |
C4 |
C3 |
C2 |
181.3 |
180.1 |
| H4 |
C4 |
C3 |
H3 |
1.3 |
0.2 |
| CE |
C1 |
C2 |
C3 |
1.1 |
0.6 |
| C2 |
C3 |
C4 |
H4 |
181.3 |
180.1 |
| C4 |
C3 |
C2 |
H3 |
180.0 |
180.1 |
| C1 |
C2 |
C3 |
HC2 |
180.0 |
179.8 |
| C3 |
C2 |
C1 |
N1 |
180.0 |
180.2 |
| H3 |
C3 |
C4 |
H4 |
1.3 |
0.2 |
| C4 |
C3 |
H3 |
C2 |
180.0 |
179.9 |
| H3 |
C3 |
C2 |
C1 |
179.1 |
179.7 |
| H3 |
C3 |
C2 |
HC2 |
359.1 |
359.9 |
| CE |
C1 |
C2 |
N1 |
181.2 |
180.3 |
| C1 |
C2 |
C3 |
H3 |
179.1 |
179.7 |
| C3 |
C2 |
C1 |
HC2 |
180.0 |
180.2 |
| C2 |
C1 |
N1 |
HN11 |
194.7 |
180.3 |
| C2 |
C1 |
N1 |
HN12 |
314.7 |
0.3 |
| HC2 |
C2 |
C3 |
H3 |
359.1 |
359.9 |
| C3 |
C2 |
HC2 |
C1 |
180.0 |
179.8 |
| HC2 |
C2 |
C1 |
N1 |
360.0 |
0.0 |
| CE |
C1 |
N1 |
C2 |
178.9 |
179.7 |
| N1 |
C1 |
C2 |
HC2 |
360.0 |
0.0 |
| HN11 |
N1 |
C1 |
HN12 |
240.0 |
180.0 |
| C1 |
N1 |
HN11 |
HN12 |
120.0 |
180.0 |
| C1 |
N1 |
HN12 |
HN11 |
240.0 |
180.0 |