PDB Chemical Component CR8

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CR8

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C11 C12 1.413 1.488
C11 C4 1.427 1.488
C11 O13 1.349 1.226
C12 C6 1.393 1.340
C12 H12 1.080 1.084
C4 C5 1.402 1.339
C4 H4 1.080 1.084
C5 C7 1.434 1.456
C5 H5 1.080 1.085
C6 C7 1.431 1.454
C6 H6 1.080 1.086
C7 C8 1.475 1.343
C8 CA2 1.384 1.428
C8 H8 1.080 1.086
CA2 C2 1.475 1.364
CA2 N2 1.378 1.363
C10 N11 1.305 1.315
C10 N22 1.353 1.368
C10 H10 1.080 1.080
N11 C23 1.340 1.373
C2 N3 1.360 1.367
C2 O2 1.227 1.219
N3 C1 1.383 1.367
N3 CA3 1.477 1.451
C1 N2 1.308 1.313
C1 CA1 1.534 1.479
C20 C21 1.520 1.512
C20 CA1 1.543 1.561
C20 H201 1.100 1.100
C20 H202 1.099 1.098
C21 N22 1.376 1.344
C21 C23 1.349 1.347
N22 H22 1.000 1.012
C23 H23 1.080 1.081
N1 CA1 1.482 1.485
N1 H 1.001 0.986
N1 H2 1.000 0.986
CA1 HA1 1.100 1.111
C3 CA3 1.495 1.504
C3 O3   1.222
C3 OXT 1.214 1.358
CA3 HA31 1.100 1.094
CA3 HA32 1.100 1.095
OXT HXT 0.950 0.981

Bond Angles for CR8

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C12 C11 C4 120.4 117.8
C12 C11 O13 119.4 121.1
C11 C12 C6 120.2 120.3
C11 C12 H12 119.9 118.1
C4 C11 O13 120.2 121.1
C11 C4 C5 119.9 120.4
C11 C4 H4 120.1 118.0
C6 C12 H12 119.9 121.6
C12 C6 C7 120.3 121.0
C12 C6 H6 119.9 119.7
C5 C4 H4 120.0 121.6
C4 C5 C7 119.8 121.0
C4 C5 H5 120.1 119.8
C7 C5 H5 120.1 119.2
C5 C7 C6 119.5 119.5
C5 C7 C8 122.2 120.3
C7 C6 H6 119.8 119.2
C6 C7 C8 118.2 120.3
C7 C8 CA2 134.0 124.4
C7 C8 H8 113.0 117.2
CA2 C8 H8 113.0 118.4
C8 CA2 C2 125.3 127.6
C8 CA2 N2 128.4 120.0
C2 CA2 N2 106.2 112.4
CA2 C2 N3 105.2 104.2
CA2 C2 O2 127.3 136.6
CA2 N2 C1 109.2 104.1
N11 C10 N22 108.8 111.8
N11 C10 H10 125.6 126.1
C10 N11 C23 109.3 104.7
N22 C10 H10 125.6 122.1
C10 N22 C21 107.1 106.0
C10 N22 H22 126.4 126.1
N11 C23 C21 108.3 109.9
N11 C23 H23 125.8 121.1
N3 C2 O2 127.5 119.2
C2 N3 C1 108.5 107.4
C2 N3 CA3 126.3 128.0
C1 N3 CA3 125.2 124.6
N3 C1 N2 110.8 111.8
N3 C1 CA1 124.5 122.3
N3 CA3 C3 116.4 112.3
N3 CA3 HA31 107.2 107.8
N3 CA3 HA32 105.7 107.7
N2 C1 CA1 124.7 125.8
C1 CA1 C20 109.5 114.5
C1 CA1 N1 109.2 112.3
C1 CA1 HA1 109.8 110.3
C21 C20 CA1 112.7 112.6
C21 C20 H201 108.4 107.6
C21 C20 H202 107.7 109.6
C20 C21 N22 127.9 121.3
C20 C21 C23 125.6 131.1
CA1 C20 H201 108.4 111.2
CA1 C20 H202 107.7 110.3
C20 CA1 N1 110.0 108.2
C20 CA1 HA1 109.0 106.5
H201 C20 H202 112.0 105.3
N22 C21 C23 106.5 107.7
C21 N22 H22 126.5 127.9
C21 C23 H23 125.9 129.0
CA1 N1 H 109.5 116.8
CA1 N1 H2 109.5 116.8
N1 CA1 HA1 109.3 104.3
H N1 H2 109.5 124.8
CA3 C3 O3   126.4
CA3 C3 OXT 120.7 109.9
C3 CA3 HA31 107.2 109.8
C3 CA3 HA32 105.6 109.8
OXT C3 O3   123.7
C3 OXT HXT 91.0 111.9
HA31 CA3 HA32 115.1 109.2

Torsion Angles for CR8

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4 C11 C12 O13 179.8 179.9
C12 C11 C4 C5 0.2 0.1
C12 C11 C4 H4 180.2 180.1
C6 C12 C11 H12 180.0 180.0
C11 C12 C6 C7 0.1 360.0
C11 C12 C6 H6 180.1 180.0
C12 C11 C4 O13 180.2 180.1
C4 C11 C12 C6 359.9 359.9
C4 C11 C12 H12 179.9 179.9
C5 C4 C11 H4 180.0 180.0
C11 C4 C5 C7 359.8 0.0
C11 C4 C5 H5 179.8 180.0
C12 C11 O13 C4 179.8 179.9
O13 C11 C12 C6 180.1 180.1
O13 C11 C12 H12 0.1 0.0
O13 C11 C4 C5 180.0 180.0
O13 C11 C4 H4 360.0 360.0
C6 C12 C11 C4 359.9 359.9
C6 C12 C11 O13 180.1 180.1
C11 C12 C6 H12 180.0 180.0
C5 C7 C6 C12 359.9 0.1
C7 C6 C12 H6 180.0 179.9
C12 C6 C7 C8 180.7 180.0
H12 C12 C11 C4 179.9 179.9
H12 C12 C11 O13 0.1 0.0
C11 C12 H12 C6 180.0 180.0
H12 C12 C6 C7 180.1 180.0
H12 C12 C6 H6 0.1 0.1
C5 C4 C11 O13 180.0 180.0
C11 C4 C5 H4 180.0 180.0
C7 C5 C4 H5 180.0 180.0
C4 C5 C7 C6 0.2 359.9
C4 C5 C7 C8 179.3 180.0
H4 C4 C11 O13 360.0 360.0
C11 C4 H4 C5 180.0 180.0
H4 C4 C5 C7 179.8 180.0
H4 C4 C5 H5 359.9 360.0
C12 C6 C7 C5 359.9 0.1
C7 C5 C4 H4 179.8 180.0
C4 C5 C7 H5 180.0 180.0
C5 C7 C6 H6 179.9 180.0
C6 C7 C5 C8 180.9 180.0
C5 C7 C8 CA2 352.3 180.0
C5 C7 C8 H8 172.3 1.7
H5 C5 C4 H4 359.9 360.0
C4 C5 H5 C7 180.0 180.0
H5 C5 C7 C6 180.1 180.0
H5 C5 C7 C8 359.3 0.0
C7 C6 C12 H12 180.1 180.0
C12 C6 C7 H6 180.0 180.1
C6 C7 C5 H5 180.1 180.0
C5 C7 C6 C8 179.2 180.0
C6 C7 C8 CA2 171.4 0.0
C6 C7 C8 H8 351.4 181.8
H6 C6 C12 H12 0.1 0.1
C12 C6 H6 C7 180.0 179.9
H6 C6 C7 C8 0.7 360.0
C8 C7 C5 H5 359.3 0.0
C5 C7 C8 C6 180.8 180.0
C8 C7 C6 H6 0.7 360.0
CA2 C8 C7 H8 180.0 178.2
C7 C8 CA2 C2 183.7 91.7
C7 C8 CA2 N2 359.4 271.7
C7 C8 CA2 H8 180.0 181.8
C2 CA2 C8 N2 184.3 180.0
C8 CA2 C2 N3 172.5 180.0
C8 CA2 C2 O2 355.6 360.0
C8 CA2 N2 C1 186.8 180.0
C7 C8 H8 CA2 180.0 178.4
H8 C8 CA2 C2 3.7 269.9
H8 C8 CA2 N2 179.4 89.9
C2 CA2 C8 H8 3.7 269.9
C8 CA2 C2 N2 176.5 180.0
C2 CA2 N2 C1 3.1 0.0
N3 C2 CA2 O2 176.9 180.0
CA2 C2 N3 C1 3.4 0.0
CA2 C2 N3 CA3 184.0 180.0
N2 CA2 C8 H8 179.4 89.9
C8 CA2 N2 C2 183.7 180.0
N2 CA2 C2 N3 356.0 360.0
N2 CA2 C2 O2 179.1 180.0
N3 C1 N2 CA2 359.0 0.0
CA2 N2 C1 CA1 180.1 180.0
N22 C10 N11 H10 180.0 180.0
N11 C10 N22 C21 0.1 360.0
N11 C10 N22 H22 180.1 180.0
C10 N11 C23 C21 359.9 360.0
C10 N11 C23 H23 179.9 180.0
N11 C10 N22 H10 180.0 180.0
N22 C10 N11 C23 360.0 0.0
C20 C21 N22 C10 180.0 180.0
C10 N22 C21 C23 359.8 0.0
C21 N22 C10 H22 180.0 180.0
N11 C10 H10 N22 180.0 180.0
H10 C10 N11 C23 180.0 180.0
H10 C10 N22 C21 180.1 180.0
H10 C10 N22 H22 0.1 360.0
C23 N11 C10 N22 360.0 0.0
C23 N11 C10 H10 180.0 180.0
C20 C21 C23 N11 180.0 180.1
N22 C21 C23 N11 0.1 360.0
C21 C23 N11 H23 180.0 180.0
N3 C2 CA2 N2 356.0 360.0
CA2 C2 N3 O2 183.1 180.0
C1 N3 C2 CA3 179.5 180.0
C2 N3 C1 N2 358.3 360.0
C2 N3 C1 CA1 177.1 180.0
C2 N3 CA3 C3 300.8 270.0
C2 N3 CA3 HA31 60.8 148.9
C2 N3 CA3 HA32 184.0 31.1
O2 C2 CA2 N2 179.1 180.0
CA2 C2 O2 N3 176.2 180.0
O2 C2 N3 C1 180.3 180.0
O2 C2 N3 CA3 0.8 360.0
CA2 N2 C1 N3 359.0 0.0
C1 N3 C2 O2 180.3 180.0
C2 N3 C1 CA3 180.5 180.0
C1 N3 CA3 C3 121.4 90.0
C1 N3 CA3 HA31 241.4 328.8
C1 N3 CA3 HA32 4.6 211.0
N2 C1 N3 CA1 181.2 180.0
N3 C1 CA1 C20 191.7 209.8
N3 C1 CA1 N1 71.3 85.9
N3 C1 CA1 HA1 311.4 330.0
CA3 N3 C2 O2 0.8 360.0
C2 N3 CA3 C1 179.4 180.0
CA3 N3 C1 N2 177.8 180.0
CA3 N3 C1 CA1 356.6 0.0
N3 CA3 C3 O3   360.0
N3 CA3 C3 OXT 144.0 180.1
C3 CA3 N3 HA31 240.0 121.2
C3 CA3 N3 HA32 116.8 239.0
HA31 CA3 N3 HA32 236.8 117.8
N2 C1 N3 CA3 177.8 180.0
N3 C1 N2 CA1 178.8 180.0
N2 C1 CA1 C20 10.4 29.9
N2 C1 CA1 N1 250.0 265.9
N2 C1 CA1 HA1 130.1 150.0
CA1 C1 N3 CA3 356.6 0.0
N3 C1 CA1 N2 181.3 179.9
C21 C20 CA1 C1 167.2 62.3
C1 CA1 C20 H201 47.2 183.0
C1 CA1 C20 H202 285.8 299.5
C20 CA1 C1 N1 120.4 124.0
C20 CA1 C1 HA1 240.3 239.9
C1 CA1 N1 H 241.6 42.4
C1 CA1 N1 H2 1.6 235.8
N1 CA1 C1 HA1 119.9 115.9
C10 N22 C21 C20 180.0 180.0
N11 C23 C21 C20 180.0 180.1
C1 CA1 C20 C21 167.2 62.3
CA1 C20 C21 H201 240.0 122.8
CA1 C20 C21 H202 118.6 236.8
C21 C20 CA1 N1 287.1 188.4
C21 C20 CA1 HA1 47.0 300.0
H201 C20 C21 H202 238.6 114.0
N22 C21 C20 C23 179.9 180.1
C20 C21 N22 H22 360.0 359.9
C20 C21 C23 H23 0.0 0.0
C1 CA1 C20 N1 240.0 233.9
C1 CA1 C20 HA1 120.2 122.2
C21 C20 CA1 H201 120.0 239.2
C21 C20 CA1 H202 241.4 122.8
CA1 C20 C21 N22 350.1 212.8
CA1 C20 C21 C23 170.3 32.7
H201 C20 CA1 H202 121.4 243.6
C20 CA1 N1 H 121.4 275.0
C20 CA1 N1 H2 241.4 108.4
N1 CA1 C20 HA1 240.1 248.3
C21 C20 H201 CA1 237.3 123.7
C21 C20 H201 H202 118.7 243.2
H201 C20 C21 N22 110.1 90.0
H201 C20 C21 C23 290.3 269.9
CA1 C20 H201 H202 241.3 119.5
H201 C20 CA1 N1 167.1 309.1
H201 C20 CA1 HA1 287.0 60.8
C21 C20 H202 CA1 121.8 235.5
C21 C20 H202 H201 240.9 115.4
H202 C20 C21 N22 231.5 336.0
H202 C20 C21 C23 51.6 155.9
CA1 C20 H202 H201 119.1 240.0
H202 C20 CA1 N1 45.7 65.6
H202 C20 CA1 HA1 165.6 177.2
C21 N22 C10 H10 180.1 180.0
C10 N22 C21 H22 180.0 180.0
N11 C23 C21 N22 0.1 360.0
N22 C21 C20 CA1 350.1 212.8
N22 C21 C20 H201 110.1 90.0
N22 C21 C20 H202 231.5 336.0
C20 C21 N22 C23 180.1 179.9
N22 C21 C23 H23 180.1 180.0
N11 C23 C21 H23 180.0 180.0
C23 C21 C20 CA1 170.3 32.7
C23 C21 C20 H201 290.3 269.9
C23 C21 C20 H202 51.6 155.9
C20 C21 C23 N22 179.9 180.1
C23 C21 N22 H22 179.8 180.0
H22 N22 C10 H10 0.1 360.0
C10 N22 H22 C21 180.0 180.0
H22 N22 C21 C23 179.8 180.0
N11 C23 H23 C21 180.0 180.0
C1 CA1 N1 C20 120.2 127.4
C1 CA1 N1 HA1 239.8 240.5
N1 CA1 C20 H201 167.1 309.1
N1 CA1 C20 H202 45.7 65.6
C20 CA1 N1 HA1 119.6 113.1
H N1 CA1 H2 240.0 166.6
CA1 N1 H H2 120.0 194.6
H N1 CA1 HA1 1.8 161.8
CA1 N1 H2 H 240.0 165.4
H2 N1 CA1 HA1 121.8 355.3
C1 CA1 HA1 C20 240.0 235.1
C1 CA1 HA1 N1 119.8 120.8
HA1 CA1 C20 H201 287.0 60.8
HA1 CA1 C20 H202 165.6 177.2
C20 CA1 HA1 N1 239.8 245.7
HA1 CA1 N1 H 1.8 161.8
HA1 CA1 N1 H2 121.8 355.3
N3 CA3 C3 HA31 120.0 240.0
N3 CA3 C3 HA32 243.2 119.9
OXT C3 CA3 O3   180.2
CA3 C3 OXT HXT 340.9 179.8
HA31 CA3 C3 HA32 123.2 239.9
CA3 C3 O3 OXT   180.2
O3 C3 CA3 HA31   120.0
O3 C3 CA3 HA32   240.1
O3 C3 OXT HXT   360.0
CA3 C3 OXT O3   179.9
OXT C3 CA3 HA31 24.1 300.1
OXT C3 CA3 HA32 260.8 60.3
N3 CA3 HA31 C3 234.3 122.7
N3 CA3 HA31 HA32 117.2 243.2
HA31 CA3 C3 O3   120.0
HA31 CA3 C3 OXT 24.1 300.1
C3 CA3 HA31 HA32 242.8 120.5
N3 CA3 HA32 C3 123.9 237.4
N3 CA3 HA32 HA31 241.9 116.9
HA32 CA3 C3 O3   240.1
HA32 CA3 C3 OXT 260.8 60.3
C3 CA3 HA32 HA31 118.1 239.5
HXT OXT C3 O3   360.0