PDB Chemical Component CR3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CR3

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.401 1.401
C1 C6 1.411 1.391
C1 C7 1.405 1.478
C2 C3 1.377 1.364
C2 HC2 1.074 1.080
C3 C4 1.362 1.393
C3 HC3 1.078 1.080
C4 C5 1.340 1.410
C4 N3 1.284 1.375
C5 C6 1.393 1.395
C5 CN4 1.315 1.463
C6 HC6 1.080 1.080
C7 N1 1.311 1.333
C7 N2 1.312 1.332
N1 HH11 1.010 0.969
N1 HH12 0.998 0.970
N2 HH21 1.009 0.971
N2 HH22 0.996 0.970
N3 C8 1.300 1.376
N3 HN3 0.986 0.970
CN4 C8 1.336 1.356
CN4 HCN4 1.030 1.080
C8 C1' 1.407 1.478
C1' C2' 1.394 1.396
C1' C6' 1.411 1.398
C2' C3' 1.392 1.380
C2' HC2' 1.079 1.080
C3' C4' 1.379 1.384
C3' HC3' 1.080 1.079
C4' C5' 1.388 1.386
C4' HC4' 1.077 1.080
C5' O5' 1.388 1.360
C5' C6' 1.386 1.390
O5' C2B 1.434 1.430
C6' O6' 1.384 1.360
C1B C2B 1.535 1.538
C1B C5B 1.518 1.543
C1B H1A 1.079 1.090
C1B H1B 1.077 1.090
C2B C3B 1.550 1.543
C2B H2A 1.076 1.089
C3B C4B 1.535 1.548
C3B H3A 1.083 1.090
C3B H3B 1.082 1.090
C4B C5B 1.524 1.549
C4B H4A 1.082 1.090
C4B H4B 1.075 1.090
C5B H5A 1.076 1.091
C5B H5B 1.081 1.090

Bond Angles for CR3

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 118.8 120.1
C2 C1 C7 118.6 119.9
C1 C2 C3 121.1 120.6
C1 C2 HC2 121.6 119.7
C6 C1 C7 122.7 119.9
C1 C6 C5 118.2 119.3
C1 C6 HC6 121.3 120.4
C1 C7 N1 120.7 120.0
C1 C7 N2 118.5 120.0
C3 C2 HC2 117.4 119.7
C2 C3 C4 118.3 120.3
C2 C3 HC3 121.3 119.8
C4 C3 HC3 120.4 119.9
C3 C4 C5 122.8 119.6
C3 C4 N3 130.6 133.0
C5 C4 N3 106.6 107.4
C4 C5 C6 120.8 119.9
C4 C5 CN4 111.5 106.3
C4 N3 C8 107.5 109.9
C4 N3 HN3 129.5 125.1
C6 C5 CN4 127.7 133.7
C5 C6 HC6 120.5 120.3
C5 CN4 C8 102.0 106.8
C5 CN4 HCN4 129.0 126.6
N1 C7 N2 120.8 119.9
C7 N1 HH11 119.2 120.1
C7 N1 HH12 125.1 119.9
C7 N2 HH21 120.2 120.0
C7 N2 HH22 122.8 120.0
HH11 N1 HH12 115.6 120.0
HH21 N2 HH22 116.7 120.0
C8 N3 HN3 123.0 125.0
N3 C8 CN4 112.3 109.6
N3 C8 C1' 122.2 125.2
C8 CN4 HCN4 129.0 126.6
CN4 C8 C1' 125.5 125.2
C8 C1' C2' 119.9 120.1
C8 C1' C6' 121.8 120.2
C2' C1' C6' 118.3 119.7
C1' C2' C3' 120.6 120.0
C1' C2' HC2' 119.9 120.0
C1' C6' C5' 120.7 119.7
C1' C6' O6' 122.8 120.2
C3' C2' HC2' 119.5 120.0
C2' C3' C4' 120.4 120.3
C2' C3' HC3' 120.2 119.8
C4' C3' HC3' 119.4 119.9
C3' C4' C5' 120.1 120.3
C3' C4' HC4' 118.8 119.8
C5' C4' HC4' 121.1 119.9
C4' C5' O5' 122.3 120.0
C4' C5' C6' 119.9 120.0
O5' C5' C6' 117.7 120.0
C5' O5' C2B 126.0 106.8
C5' C6' O6' 116.5 120.1
O5' C2B C1B 106.9 110.0
O5' C2B C3B 107.2 110.1
O5' C2B H2A 112.0 110.0
C2B C1B C5B 105.5 106.6
C2B C1B H1A 111.1 110.1
C2B C1B H1B 110.7 110.1
C1B C2B C3B 105.6 106.6
C1B C2B H2A 112.4 110.0
C5B C1B H1A 108.3 110.0
C5B C1B H1B 110.6 110.0
C1B C5B C4B 105.0 104.2
C1B C5B H5A 112.2 110.5
C1B C5B H5B 111.1 110.5
H1A C1B H1B 110.5 110.0
C3B C2B H2A 112.3 110.1
C2B C3B C4B 106.7 104.2
C2B C3B H3A 110.7 110.5
C2B C3B H3B 112.2 110.5
C4B C3B H3A 109.5 110.5
C4B C3B H3B 109.4 110.5
C3B C4B C5B 106.3 102.8
C3B C4B H4A 111.1 110.8
C3B C4B H4B 109.1 110.8
H3A C3B H3B 108.2 110.6
C5B C4B H4A 112.2 110.8
C5B C4B H4B 109.7 110.7
C4B C5B H5A 110.1 110.5
C4B C5B H5B 109.0 110.5
H4A C4B H4B 108.5 110.8
H5A C5B H5B 109.4 110.6

Torsion Angles for CR3

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C7 180.4 180.2
C2 C1 C6 C5 0.3 359.5
C2 C1 C6 HC6 180.3 179.6
C2 C1 C7 N1 184.3 180.0
C2 C1 C7 N2 3.6 360.0
C3 C2 C1 HC2 180.3 180.0
C1 C2 C3 C4 0.2 360.0
C1 C2 C3 HC3 179.8 180.0
C2 C1 C6 C7 179.6 179.8
C6 C1 C2 C3 359.6 0.3
C6 C1 C2 HC2 179.3 180.2
C6 C1 C7 N1 3.9 359.7
C6 C1 C7 N2 183.2 179.7
C4 C5 C6 C1 359.9 0.4
C1 C6 C5 CN4 179.3 180.2
C5 C6 C1 HC6 180.0 179.9
C2 C1 C7 C6 180.4 180.2
C7 C1 C2 C3 179.2 180.0
C7 C1 C2 HC2 358.9 360.0
C7 C1 C6 C5 180.7 179.8
C7 C1 C6 HC6 0.7 359.9
N1 C7 C1 N2 180.7 180.0
C1 C7 N1 HH11 357.2 180.0
C1 C7 N1 HH12 181.3 360.0
C1 C7 N2 HH21 2.6 0.0
C1 C7 N2 HH22 176.9 179.8
C3 C2 C1 C6 359.6 0.3
C3 C2 C1 C7 179.2 180.0
C1 C2 C3 HC2 179.7 180.0
C4 C3 C2 HC3 180.4 180.0
C2 C3 C4 C5 0.1 0.0
C2 C3 C4 N3 180.2 180.0
HC2 C2 C1 C6 179.3 180.2
HC2 C2 C1 C7 358.9 360.0
C1 C2 HC2 C3 180.3 180.0
HC2 C2 C3 C4 180.5 180.0
HC2 C2 C3 HC3 0.1 360.0
C4 C3 C2 HC2 180.5 180.0
C2 C3 C4 HC3 179.6 180.0
C5 C4 C3 N3 179.8 180.0
C3 C4 C5 C6 359.9 359.8
C3 C4 C5 CN4 180.4 180.0
C3 C4 N3 C8 179.8 180.0
C3 C4 N3 HN3 358.5 0.0
HC3 C3 C2 HC2 0.1 360.0
C2 C3 HC3 C4 180.4 180.0
HC3 C3 C4 C5 180.4 180.0
HC3 C3 C4 N3 0.6 360.0
C1 C6 C5 C4 359.9 0.4
C5 C4 C3 HC3 180.4 180.0
C3 C4 C5 N3 180.1 180.0
C5 C4 N3 C8 360.0 360.0
C5 C4 N3 HN3 178.7 180.0
C6 C5 C4 CN4 179.5 179.8
C4 C5 C6 HC6 179.9 180.3
C4 C5 CN4 C8 359.7 0.0
C4 C5 CN4 HCN4 179.7 180.0
N3 C4 C3 HC3 0.6 360.0
C3 C4 N3 C5 179.9 180.0
N3 C4 C5 C6 179.8 179.8
N3 C4 C5 CN4 0.2 360.0
C8 N3 C4 HN3 181.3 180.0
C4 N3 C8 CN4 359.8 0.1
C4 N3 C8 C1' 178.6 180.0
C5 C6 C1 C7 180.7 179.8
C1 C6 C5 HC6 180.0 180.1
C6 C5 C4 N3 179.8 179.8
C4 C5 C6 CN4 180.6 180.3
C6 C5 CN4 C8 180.2 180.3
C6 C5 CN4 HCN4 0.2 0.2
CN4 C5 C4 N3 0.2 360.0
C4 C5 CN4 C6 179.5 179.8
CN4 C5 C6 HC6 359.3 0.1
N3 C8 CN4 C5 0.3 359.9
C8 CN4 C5 HCN4 180.0 180.1
C5 CN4 C8 C1' 181.6 180.0
HC6 C6 C1 C7 0.7 359.9
C1 C6 HC6 C5 180.0 179.9
HC6 C6 C5 CN4 359.3 0.1
C1 C7 N1 N2 179.3 180.0
N1 C7 N2 HH21 181.9 180.0
N1 C7 N2 HH22 356.2 359.8
HH11 N1 C7 HH12 175.9 180.0
C1 C7 N2 N1 180.7 180.0
N2 C7 N1 HH11 177.9 0.0
N2 C7 N1 HH12 2.0 180.0
HH21 N2 C7 HH22 185.7 180.3
HH11 N1 C7 N2 177.9 0.0
C7 N1 HH11 HH12 183.7 180.0
HH12 N1 C7 N2 2.0 180.0
C7 N1 HH12 HH11 176.0 180.0
C7 N2 HH21 HH22 174.6 179.7
C7 N2 HH22 HH21 185.5 180.3
C4 N3 C8 HN3 178.8 180.0
C5 CN4 C8 N3 0.3 359.9
N3 C8 CN4 HCN4 180.3 180.0
CN4 C8 N3 C1' 181.3 180.1
N3 C8 C1' C2' 186.5 140.1
N3 C8 C1' C6' 4.4 319.8
C4 N3 HN3 C8 181.5 180.0
HN3 N3 C8 CN4 181.0 180.0
HN3 N3 C8 C1' 359.8 359.9
C5 CN4 C8 HCN4 180.0 179.9
CN4 C8 N3 HN3 181.0 180.0
N3 C8 CN4 C1' 178.7 179.9
CN4 C8 C1' C2' 5.1 320.0
CN4 C8 C1' C6' 183.0 139.7
C5 CN4 HCN4 C8 180.0 180.1
HCN4 CN4 C8 C1' 1.6 0.1
C1' C8 N3 HN3 359.8 359.9
N3 C8 C1' CN4 181.4 180.1
C1' C8 CN4 HCN4 1.6 0.1
C2' C1' C8 C6' 182.0 180.3
C8 C1' C2' C3' 178.0 180.0
C8 C1' C2' HC2' 358.2 0.0
C8 C1' C6' C5' 182.3 179.7
C8 C1' C6' O6' 3.4 0.3
C8 C1' C2' C6' 178.0 179.7
C2' C1' C6' C5' 0.2 359.4
C2' C1' C6' O6' 181.3 180.0
C3' C2' C1' HC2' 179.9 180.0
C1' C2' C3' C4' 359.9 0.1
C1' C2' C3' HC3' 179.8 180.0
C8 C1' C6' C2' 182.0 180.3
C6' C1' C2' C3' 0.0 0.3
C6' C1' C2' HC2' 180.1 180.3
C4' C5' C6' C1' 359.6 0.6
O5' C5' C6' C1' 178.9 180.3
C5' C6' C1' O6' 178.9 179.4
C3' C2' C1' C6' 0.0 0.3
C1' C2' C3' HC2' 180.1 180.0
C4' C3' C2' HC3' 180.0 180.1
C2' C3' C4' C5' 359.9 359.9
C2' C3' C4' HC4' 180.5 180.0
HC2' C2' C1' C6' 180.1 180.3
C1' C2' HC2' C3' 179.9 180.0
HC2' C2' C3' C4' 179.8 180.0
HC2' C2' C3' HC3' 359.7 359.9
C4' C3' C2' HC2' 179.8 180.0
C2' C3' C4' HC3' 180.0 179.9
C5' C4' C3' HC4' 179.5 179.9
C3' C4' C5' O5' 181.1 180.1
C3' C4' C5' C6' 0.3 359.8
HC3' C3' C2' HC2' 359.7 359.9
C2' C3' HC3' C4' 180.0 180.1
HC3' C3' C4' C5' 180.0 180.0
HC3' C3' C4' HC4' 0.5 0.1
C1' C6' C5' C4' 359.6 0.6
C5' C4' C3' HC3' 180.0 180.0
C3' C4' C5' HC4' 180.5 180.1
O5' C5' C4' C6' 180.7 180.3
C4' C5' O5' C2B 15.8 6.6
C4' C5' C6' O6' 178.5 180.0
HC4' C4' C3' HC3' 0.5 0.1
C3' C4' HC4' C5' 179.5 179.9
HC4' C4' C5' O5' 0.5 360.0
HC4' C4' C5' C6' 179.8 179.7
C1' C6' C5' O5' 178.9 180.3
O5' C5' C4' HC4' 0.5 360.0
C4' C5' O5' C6' 179.3 179.7
O5' C5' C6' O6' 357.8 359.7
C5' O5' C2B C1B 199.2 158.3
C5' O5' C2B C3B 86.3 275.4
C5' O5' C2B H2A 322.7 36.9
C1' C6' C5' O6' 181.0 180.6
C6' C5' C4' HC4' 179.8 179.7
C4' C5' C6' O5' 180.7 180.3
C6' C5' O5' C2B 196.5 186.9
C2B O5' C5' C6' 196.5 186.9
O5' C2B C1B C5B 220.5 119.3
O5' C2B C1B H1A 337.7 238.6
O5' C2B C1B H1B 100.8 0.0
C1B C2B O5' C3B 112.9 242.8
C1B C2B O5' H2A 236.5 121.4
C3B C2B O5' H2A 123.6 238.6
O5' C2B C3B C4B 121.6 217.1
O5' C2B C3B H3A 240.7 335.8
O5' C2B C3B H3B 1.8 98.4
C1' C6' O6' C5' 178.9 179.4
O5' C2B C1B C3B 246.0 119.3
O5' C2B C1B H2A 123.3 238.6
C5B C1B C2B H1A 242.8 240.7
C5B C1B C2B H1B 119.7 119.3
C2B C1B C5B C4B 33.6 23.6
C2B C1B C5B H5A 153.2 142.3
C2B C1B C5B H5B 276.0 265.0
H1A C1B C2B H1B 236.9 238.6
C3B C2B C1B H2A 237.3 119.4
C1B C2B C3B C4B 7.8 336.4
C1B C2B C3B H3A 126.9 95.1
C1B C2B C3B H3B 248.0 217.7
C2B C1B C5B H1A 119.0 119.3
C2B C1B C5B H1B 240.3 240.7
C5B C1B C2B C3B 334.5 0.0
C5B C1B C2B H2A 97.2 240.7
H1A C1B C5B H1B 121.3 121.4
C3B C4B C5B C1B 331.4 322.1
C1B C5B C4B H4A 93.0 80.4
C1B C5B C4B H4B 213.6 203.7
C4B C5B C1B H5A 240.4 241.3
C4B C5B C1B H5B 117.7 118.6
H5A C5B C1B H5B 237.3 237.3
C2B C1B H1A C5B 244.5 242.8
C2B C1B H1A H1B 123.2 121.4
H1A C1B C2B C3B 91.7 119.3
H1A C1B C2B H2A 214.4 359.9
C5B C1B H1A H1B 238.7 238.6
H1A C1B C5B C4B 274.6 264.3
H1A C1B C5B H5A 34.2 23.0
H1A C1B C5B H5B 156.9 145.7
C2B C1B H1B C5B 116.6 117.2
C2B C1B H1B H1A 236.5 238.6
H1B C1B C2B C3B 214.8 240.7
H1B C1B C2B H2A 337.5 121.4
C5B C1B H1B H1A 119.9 121.4
H1B C1B C5B C4B 153.3 142.9
H1B C1B C5B H5A 273.0 261.6
H1B C1B C5B H5B 35.7 24.3
O5' C2B C3B C1B 113.8 240.7
O5' C2B C3B H2A 236.6 121.4
C3B C2B C1B C5B 334.5 0.0
C3B C2B C1B H1A 91.7 119.3
C3B C2B C1B H1B 214.8 240.7
C1B C2B C3B H2A 122.8 240.7
C4B C3B C2B H3A 240.9 241.3
C4B C3B C2B H3B 119.8 118.7
C2B C3B C4B C5B 12.7 38.0
C2B C3B C4B H4A 250.4 279.6
C2B C3B C4B H4B 130.9 156.2
H3A C3B C2B H3B 239.0 237.4
O5' C2B H2A C1B 239.6 121.4
O5' C2B H2A C3B 120.7 238.6
H2A C2B C1B C5B 97.2 240.7
H2A C2B C1B H1A 214.4 359.9
H2A C2B C1B H1B 337.5 121.4
C1B C2B H2A C3B 241.1 117.2
H2A C2B C3B C4B 245.0 95.7
H2A C2B C3B H3A 4.1 214.4
H2A C2B C3B H3B 125.2 337.0
C1B C5B C4B C3B 331.4 322.1
C4B C3B C2B H2A 245.0 95.7
C2B C3B C4B H3A 119.9 118.7
C2B C3B C4B H3B 238.4 241.4
H3A C3B C4B H3B 118.4 122.7
C5B C4B C3B H4A 122.3 118.3
C5B C4B C3B H4B 241.8 241.7
C3B C4B C5B H5A 210.4 203.4
C3B C4B C5B H5B 90.4 80.7
H4A C4B C3B H4B 119.5 123.4
H3A C3B C2B H2A 4.1 214.4
C2B C3B H3A C4B 242.6 245.2
C2B C3B H3A H3B 123.4 122.6
C4B C3B H3A H3B 240.8 237.3
H3A C3B C4B C5B 252.8 279.3
H3A C3B C4B H4A 130.5 161.0
H3A C3B C4B H4B 11.0 37.6
H3B C3B C2B H2A 125.2 337.0
C2B C3B H3B C4B 118.3 114.8
C2B C3B H3B H3A 237.5 237.4
C4B C3B H3B H3A 119.2 122.7
H3B C3B C4B C5B 134.3 156.6
H3B C3B C4B H4A 12.0 38.3
H3B C3B C4B H4B 252.5 274.9
C4B C5B C1B H1A 274.6 264.3
C4B C5B C1B H1B 153.3 142.9
C1B C5B C4B H5A 121.0 118.7
C1B C5B C4B H5B 240.9 241.3
C5B C4B C3B H3A 252.8 279.3
C5B C4B C3B H3B 134.3 156.6
C3B C4B C5B H4A 238.4 241.7
C3B C4B C5B H4B 117.8 118.3
H4A C4B C5B H4B 239.4 236.7
H5A C5B C4B H5B 119.9 122.6
H4A C4B C3B H3A 130.5 161.0
H4A C4B C3B H3B 12.0 38.3
C3B C4B H4A C5B 118.8 113.4
C3B C4B H4A H4B 240.1 236.6
C5B C4B H4A H4B 121.3 123.3
H4A C4B C5B H5A 332.0 321.7
H4A C4B C5B H5B 212.1 199.1
H4B C4B C3B H3A 11.0 37.6
H4B C4B C3B H3B 252.5 274.9
C3B C4B H4B C5B 244.0 246.7
C3B C4B H4B H4A 121.1 123.4
C5B C4B H4B H4A 237.2 236.7
H4B C4B C5B H5A 92.6 85.0
H4B C4B C5B H5B 332.7 322.4
H5A C5B C1B H1A 34.2 23.0
H5A C5B C1B H1B 273.0 261.6
C1B C5B H5A C4B 243.4 245.2
C1B C5B H5A H5B 123.7 122.7
H5A C5B C4B H4A 332.0 321.7
H5A C5B C4B H4B 92.6 85.0
C4B C5B H5A H5B 240.3 237.4
H5B C5B C1B H1A 156.9 145.7
H5B C5B C1B H1B 35.7 24.3
C1B C5B H5B C4B 115.2 114.7
C1B C5B H5B H5A 235.7 237.3
H5B C5B C4B H4A 212.1 199.1
H5B C5B C4B H4B 332.7 322.4
C4B C5B H5B H5A 120.4 122.6