PDB Chemical Component CPF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CPF

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O2	C3	1.237	1.348
O2	HO2	0.950	0.966
C3	O1	1.269	1.216
C3	C2	1.510	1.469
C2	C1	1.367	1.380
C2	C4	1.419	1.473
C1	N1	1.341	1.339
C1	H1	1.080	1.080
N1	C10	1.394	1.380
N1	C11	1.454	1.465
C10	C9	1.404	1.390
C10	C5	1.403	1.407
C9	C8	1.389	1.385
C9	H9	1.080	1.079
C8	N2	1.393	1.393
C8	C7	1.424	1.397
N2	C17	1.467	1.470
N2	C14	1.470	1.470
C17	C16	1.515	1.531
C17	H171	1.100	1.089
C17	H172	1.100	1.090
C16	N3	1.488	1.469
C16	H161	1.100	1.090
C16	H162	1.100	1.090
N3	C15	1.477	1.470
N3	HN3	1.000	1.009
C15	C14	1.509	1.531
C15	H151	1.100	1.090
C15	H152	1.100	1.091
C14	H141	1.100	1.090
C14	H142	1.100	1.090
C7	F1	1.354	1.350
C7	C6	1.359	1.367
C6	C5	1.409	1.397
C6	H6	1.080	1.080
C5	C4	1.455	1.473
C4	O3	1.271	1.219
C11	C12	1.494	1.530
C11	C13	1.494	1.530
C11	H11	1.099	1.090
C12	C13	1.498	1.530
C12	H121	1.100	1.090
C12	H122	1.100	1.090
C13	H131	1.100	1.089
C13	H132	1.100	1.090

Bond Angles for CPF

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C3	O2	HO2	109.5	117.0
O2	C3	O1	123.0	120.0
O2	C3	C2	118.0	120.1
O1	C3	C2	119.0	120.0
C3	C2	C1	116.0	120.6
C3	C2	C4	124.5	120.5
C1	C2	C4	119.5	118.9
C2	C1	N1	124.7	122.2
C2	C1	H1	117.7	118.9
C2	C4	C5	115.9	117.2
C2	C4	O3	125.8	121.4
N1	C1	H1	117.6	118.9
C1	N1	C10	119.4	122.8
C1	N1	C11	121.4	118.6
C10	N1	C11	119.1	118.6
N1	C10	C9	120.1	120.5
N1	C10	C5	118.9	120.2
N1	C11	C12	118.3	117.5
N1	C11	C13	119.7	117.5
N1	C11	H11	91.2	115.6
C9	C10	C5	121.0	119.3
C10	C9	C8	121.6	119.8
C10	C9	H9	119.2	120.1
C10	C5	C6	117.7	120.3
C10	C5	C4	121.4	118.7
C8	C9	H9	119.2	120.2
C9	C8	N2	122.4	119.7
C9	C8	C7	116.0	120.6
N2	C8	C7	121.5	119.7
C8	N2	C17	116.9	111.0
C8	N2	C14	118.0	111.0
C8	C7	F1	118.9	119.9
C8	C7	C6	123.3	120.3
C17	N2	C14	111.8	110.9
N2	C17	C16	110.6	109.3
N2	C17	H171	109.1	109.4
N2	C17	H172	109.1	109.5
N2	C14	C15	110.7	109.3
N2	C14	H141	109.1	109.5
N2	C14	H142	109.1	109.5
C16	C17	H171	109.1	109.5
C16	C17	H172	109.1	109.5
C17	C16	N3	109.9	109.4
C17	C16	H161	109.3	109.5
C17	C16	H162	109.3	109.5
H171	C17	H172	109.9	109.5
N3	C16	H161	109.3	109.5
N3	C16	H162	109.3	109.5
C16	N3	C15	111.3	110.8
C16	N3	HN3	108.8	111.0
H161	C16	H162	109.6	109.5
C15	N3	HN3	108.9	111.0
N3	C15	C14	109.5	109.4
N3	C15	H151	109.5	109.5
N3	C15	H152	109.5	109.4
C14	C15	H151	109.5	109.5
C14	C15	H152	109.4	109.5
C15	C14	H141	109.1	109.5
C15	C14	H142	109.1	109.5
H151	C15	H152	109.5	109.5
H141	C14	H142	109.9	109.5
F1	C7	C6	117.8	119.8
C7	C6	C5	120.4	119.8
C7	C6	H6	119.8	120.1
C5	C6	H6	119.8	120.1
C6	C5	C4	120.9	121.0
C5	C4	O3	118.3	121.4
C12	C11	C13	60.2	60.0
C12	C11	H11	135.6	117.5
C11	C12	C13	59.9	60.0
C11	C12	H121	131.0	117.5
C11	C12	H122	131.0	117.5
C13	C11	H11	134.3	117.5
C11	C13	C12	59.9	60.0
C11	C13	H131	130.9	117.5
C11	C13	H132	130.9	117.5
C13	C12	H121	130.9	117.5
C13	C12	H122	130.9	117.5
C12	C13	H131	130.9	117.5
C12	C13	H132	130.9	117.5
H121	C12	H122	81.7	115.6
H131	C13	H132	81.7	115.6

Torsion Angles for CPF

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C3	O2	C2	181.1	180.0
O2	C3	C2	C1	1.0	180.0
O2	C3	C2	C4	183.2	359.8
HO2	O2	C3	O1	360.0	360.0
HO2	O2	C3	C2	178.9	180.0
O1	C3	O2	HO2	360.0	360.0
O2	C3	O1	C2	178.9	180.0
O1	C3	C2	C1	180.0	360.0
O1	C3	C2	C4	2.1	179.8
C2	C3	O2	HO2	178.9	180.0
O2	C3	C2	O1	181.1	180.0
C1	C2	C3	C4	177.9	180.2
C3	C2	C1	N1	181.3	180.0
C3	C2	C1	H1	1.3	360.0
C3	C2	C4	C5	176.7	179.8
C3	C2	C4	O3	357.3	360.0
C3	C2	C1	C4	182.0	179.8
C1	C2	C4	C5	358.8	359.6
C1	C2	C4	O3	179.5	179.8
N1	C1	C2	H1	180.0	180.0
C2	C1	N1	C10	1.8	0.0
C2	C1	N1	C11	178.8	180.0
C3	C2	C4	C1	177.8	180.2
C4	C2	C1	N1	359.2	0.2
C4	C2	C1	H1	179.2	180.2
C10	C5	C4	C2	2.1	0.5
C6	C5	C4	C2	181.9	180.1
C5	C4	C2	O3	179.3	179.8
N1	C1	C2	C4	359.2	0.2
C2	C1	N1	H1	180.0	180.0
C10	N1	C1	C11	183.0	180.0
C1	N1	C10	C9	179.2	180.0
C1	N1	C10	C5	359.2	0.0
C1	N1	C11	C12	103.8	54.7
C1	N1	C11	C13	33.9	346.0
C1	N1	C11	H11	249.1	200.3
H1	C1	C2	C4	179.2	180.2
C2	C1	H1	N1	180.0	180.0
H1	C1	N1	C10	181.8	180.0
H1	C1	N1	C11	358.8	360.0
C10	N1	C1	H1	181.8	180.0
C1	N1	C10	C11	177.1	180.0
C10	N1	C11	C12	280.8	234.6
C10	N1	C11	C13	210.9	166.0
C10	N1	C11	H11	66.1	20.3
C9	C10	N1	C5	180.0	180.0
N1	C10	C9	C8	180.2	180.0
N1	C10	C9	H9	0.2	360.0
N1	C10	C5	C6	179.1	180.1
N1	C10	C5	C4	358.9	359.7
C11	N1	C1	H1	358.8	360.0
C1	N1	C11	C10	183.0	180.0
C11	N1	C10	C9	2.2	0.0
C11	N1	C10	C5	182.1	180.1
C12	C11	N1	C13	69.9	68.6
C12	C11	N1	H11	214.7	214.3
N1	C11	C12	C13	250.1	252.5
N1	C11	C12	H121	10.1	0.0
N1	C11	C12	H122	130.2	145.0
C13	C11	N1	H11	144.8	145.7
N1	C11	C13	C12	107.6	107.5
N1	C11	C13	H131	227.6	214.9
N1	C11	C13	H132	347.6	0.0
C9	C10	N1	C11	2.2	0.0
N1	C10	C9	C5	180.0	180.0
C9	C10	C5	C6	359.0	0.1
C9	C10	C5	C4	178.8	179.7
C8	C9	C10	H9	180.0	180.0
C10	C9	C8	N2	177.2	180.0
C10	C9	C8	C7	1.0	0.0
C2	C4	C5	C10	2.1	0.5
C5	C10	N1	C11	182.1	180.1
N1	C10	C5	C9	180.0	180.0
C5	C10	C9	C8	0.3	360.0
C5	C10	C9	H9	180.3	179.9
C7	C6	C5	C10	0.3	359.9
C10	C5	C6	H6	180.3	180.0
C6	C5	C10	C4	180.2	180.4
C10	C5	C4	O3	181.4	180.3
C8	C9	C10	C5	0.3	360.0
C10	C9	C8	H9	180.0	180.0
N2	C8	C9	C7	176.1	180.0
C9	C8	N2	C17	353.7	300.0
C9	C8	N2	C14	131.5	63.8
C9	C8	C7	F1	176.2	180.0
C9	C8	C7	C6	358.3	360.0
H9	C9	C10	C5	180.3	179.9
C10	C9	H9	C8	180.0	180.0
H9	C9	C8	N2	357.2	0.0
H9	C9	C8	C7	181.0	180.0
N2	C8	C9	H9	357.2	0.0
C9	C8	N2	C7	184.1	180.0
N2	C8	C7	F1	0.0	360.0
N2	C8	C7	C6	182.1	180.0
C17	N2	C8	C14	222.2	236.2
C8	N2	C17	C16	196.7	183.2
C8	N2	C17	H171	316.7	303.1
C8	N2	C17	H172	76.7	63.2
C8	N2	C14	C15	162.8	176.8
C8	N2	C14	H141	282.8	296.8
C8	N2	C14	H142	42.8	56.8
C7	C8	C9	H9	181.0	180.0
C9	C8	C7	N2	176.2	180.0
C7	C8	N2	C17	169.6	120.0
C7	C8	N2	C14	307.4	243.8
F1	C7	C8	C6	177.9	180.0
C8	C7	C6	C5	1.1	0.1
C8	C7	C6	H6	181.1	180.0
C17	N2	C8	C7	169.6	120.0
C8	N2	C17	C14	140.2	123.8
C17	N2	C14	C15	302.6	300.7
C17	N2	C14	H141	62.6	60.6
C17	N2	C14	H142	182.6	180.7
C16	C17	N2	H171	240.0	240.0
C16	C17	N2	H172	120.0	120.0
N2	C17	C16	N3	304.4	301.5
N2	C17	C16	H161	64.4	61.6
N2	C17	C16	H162	184.3	181.6
H171	C17	N2	H172	240.0	239.9
C14	N2	C8	C7	307.4	243.8
C8	N2	C14	C17	220.2	236.1
C14	N2	C17	C16	56.4	59.4
C14	N2	C17	H171	176.5	179.3
C14	N2	C17	H172	296.5	299.4
N3	C15	C14	N2	57.4	58.4
N2	C14	C15	H151	297.4	298.4
N2	C14	C15	H152	177.4	178.3
C15	C14	N2	H141	240.0	240.0
C15	C14	N2	H142	120.0	119.9
H141	C14	N2	H142	240.0	239.9
C16	C17	N2	C14	56.4	59.4
N2	C17	C16	H171	120.0	119.9
N2	C17	C16	H172	240.0	240.1
H171	C17	C16	H172	120.0	120.1
N3	C16	C17	H161	240.0	240.0
N3	C16	C17	H162	120.0	119.9
C17	C16	N3	C15	57.3	59.4
C17	C16	N3	HN3	177.3	183.2
H161	C16	C17	H162	240.0	240.0
H171	C17	N2	C14	176.5	179.3
N2	C17	H171	C16	239.1	240.2
N2	C17	H171	H172	119.6	120.0
C16	C17	H171	H172	240.5	239.9
H171	C17	C16	N3	184.3	181.6
H171	C17	C16	H161	304.4	301.6
H171	C17	C16	H162	64.3	61.7
H172	C17	N2	C14	296.5	299.4
N2	C17	H172	C16	120.9	119.9
N2	C17	H172	H171	240.4	240.0
C16	C17	H172	H171	119.5	120.1
H172	C17	C16	N3	64.4	61.5
H172	C17	C16	H161	184.4	181.5
H172	C17	C16	H162	304.3	301.5
N3	C16	C17	H171	184.3	181.6
N3	C16	C17	H172	64.4	61.5
C17	C16	N3	H161	120.0	120.0
C17	C16	N3	H162	240.0	240.1
H161	C16	N3	H162	120.0	120.1
C15	N3	C16	HN3	240.0	236.2
C16	N3	C15	C14	302.0	300.6
C16	N3	C15	H151	62.0	60.6
C16	N3	C15	H152	182.0	180.7
H161	C16	C17	H171	304.4	301.6
H161	C16	C17	H172	184.4	181.5
C17	C16	H161	N3	239.6	240.1
C17	C16	H161	H162	119.8	120.0
N3	C16	H161	H162	240.2	240.0
H161	C16	N3	C15	297.3	299.4
H161	C16	N3	HN3	57.3	63.2
H162	C16	C17	H171	64.3	61.7
H162	C16	C17	H172	304.3	301.5
C17	C16	H162	N3	120.4	119.9
C17	C16	H162	H161	240.2	239.9
N3	C16	H162	H161	119.8	120.1
H162	C16	N3	C15	177.3	179.3
H162	C16	N3	HN3	297.3	303.1
N2	C14	C15	N3	57.4	58.4
C15	N3	C16	H161	297.3	299.4
C15	N3	C16	H162	177.3	179.3
C16	N3	C15	HN3	120.0	123.9
C14	C15	N3	H151	240.0	240.0
C14	C15	N3	H152	120.0	119.9
N3	C15	C14	H141	297.4	298.5
N3	C15	C14	H142	177.4	178.4
H151	C15	N3	H152	240.0	239.9
HN3	N3	C16	H161	57.3	63.2
HN3	N3	C16	H162	297.3	303.1
C16	N3	HN3	C15	238.5	236.2
HN3	N3	C15	C14	182.0	176.8
HN3	N3	C15	H151	302.0	296.8
HN3	N3	C15	H152	62.0	56.8
N2	C14	C15	H141	120.0	120.0
N2	C14	C15	H142	240.0	240.0
C14	C15	N3	HN3	182.0	176.8
N3	C15	C14	H151	120.0	120.0
N3	C15	C14	H152	240.0	240.1
H151	C15	C14	H152	120.0	120.1
H141	C14	C15	H142	120.0	120.1
H151	C15	N3	HN3	302.0	296.8
N3	C15	H151	C14	240.0	240.1
N3	C15	H151	H152	120.0	120.0
C14	C15	H151	H152	240.0	239.9
H151	C15	C14	H141	177.4	178.4
H151	C15	C14	H142	57.4	58.4
H152	C15	N3	HN3	62.0	56.8
N3	C15	H152	C14	120.0	119.9
N3	C15	H152	H151	240.0	239.9
C14	C15	H152	H151	120.0	120.1
H152	C15	C14	H141	57.4	58.4
H152	C15	C14	H142	297.4	298.3
N2	C14	H141	C15	239.0	240.1
N2	C14	H141	H142	119.5	120.1
H141	C14	C15	H151	177.4	178.4
H141	C14	C15	H152	57.4	58.4
C15	C14	H141	H142	240.5	239.9
N2	C14	H142	C15	121.0	119.8
N2	C14	H142	H141	240.5	239.9
H142	C14	C15	H151	57.4	58.4
H142	C14	C15	H152	297.4	298.3
C15	C14	H142	H141	119.5	120.1
C8	C7	F1	C6	182.0	180.0
F1	C7	C6	C5	183.1	180.1
F1	C7	C6	H6	3.1	0.0
C10	C5	C6	C7	0.3	359.9
C8	C7	C6	F1	177.9	180.0
C5	C6	C7	H6	180.0	180.1
C7	C6	C5	C4	180.5	180.3
C2	C4	C5	C6	181.9	180.1
C10	C5	C6	C4	179.8	179.6
C7	C6	C5	H6	180.0	179.9
C6	C5	C4	O3	1.2	359.9
C7	C6	H6	C5	180.0	180.1
H6	C6	C5	C4	0.5	0.3
C2	C4	C5	O3	180.6	180.2
C10	C5	C4	C6	180.2	180.4
C4	C5	C6	H6	0.5	0.3
C2	C4	O3	C5	179.3	179.8
N1	C11	C12	H11	125.7	145.0
C13	C11	C12	H11	235.6	252.5
C12	C11	C13	C12	360.0	-0.0
C12	C11	C13	H131	120.0	107.5
C12	C11	C13	H132	240.0	252.5
C13	C12	C11	H121	240.0	252.5
C13	C12	C11	H122	119.9	107.5
C11	C12	C13	H131	240.0	252.4
C11	C12	C13	H132	120.0	107.5
H121	C12	C11	H122	239.9	215.0
N1	C11	C13	H11	233.7	214.9
C12	C11	C13	H11	126.2	107.5
C13	C11	C12	C13	-0.0	-0.0
C13	C11	C12	H121	120.0	107.5
C13	C11	C12	H122	240.1	252.5
C11	C13	C12	H121	240.0	252.6
C11	C13	C12	H122	120.0	107.4
C12	C13	C11	H131	240.0	252.5
C12	C13	C11	H132	120.0	107.5
H131	C13	C11	H132	240.0	214.9
N1	C11	H11	C12	225.7	214.3
N1	C11	H11	C13	135.5	145.7
C12	C11	H11	C13	269.9	291.4
H11	C11	C12	C13	124.4	107.5
H11	C11	C12	H121	244.4	215.0
H11	C11	C12	H122	4.5	360.0
H11	C11	C13	C12	233.8	252.5
H11	C11	C13	H131	353.8	0.0
H11	C11	C13	H132	113.9	145.1
C13	C12	C11	C13	-0.0	-0.0
C13	C12	C11	H11	124.4	107.5
C11	C12	C13	H121	120.0	107.4
C11	C12	C13	H122	240.0	252.6
C12	C13	C11	H11	233.8	252.5
C11	C13	C12	H131	120.0	107.6
C11	C13	C12	H132	240.0	252.5
H121	C12	C13	H122	120.0	145.1
H131	C13	C12	H132	120.0	145.0
H121	C12	C11	C13	120.0	107.5
H121	C12	C11	H11	244.4	215.0
C11	C12	H121	C13	277.2	291.4
C11	C12	H121	H122	138.7	145.6
C13	C12	H121	H122	221.4	214.2
H121	C12	C13	H131	120.0	145.0
H121	C12	C13	H132	360.0	0.1
H122	C12	C11	C13	240.1	252.5
H122	C12	C11	H11	4.5	360.0
C11	C12	H122	C13	82.7	68.6
C11	C12	H122	H121	221.3	214.4
C13	C12	H122	H121	138.6	145.8
H122	C12	C13	H131	360.0	359.9
H122	C12	C13	H132	240.0	214.9
H131	C13	C11	H11	353.8	0.0
C11	C13	H131	C12	277.2	291.3
C11	C13	H131	H132	138.6	145.7
H131	C13	C12	H121	120.0	145.0
H131	C13	C12	H122	360.0	359.9
C12	C13	H131	H132	221.4	214.4
H132	C13	C11	H11	113.9	145.1
C11	C13	H132	C12	82.8	68.6
C11	C13	H132	H131	221.4	214.3
H132	C13	C12	H121	360.0	0.1
H132	C13	C12	H122	240.0	214.9
C12	C13	H132	H131	138.6	145.6