PDB Chemical Component CMT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CMT
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.458 |
1.469 |
| N |
H |
1.021 |
1.009 |
| N |
H2 |
1.019 |
1.008 |
| CA |
C |
1.533 |
1.506 |
| CA |
CB |
1.533 |
1.529 |
| CA |
HA |
1.115 |
1.090 |
| C |
O |
1.253 |
1.207 |
| C |
OXT |
1.253 |
1.341 |
| CB |
SG |
1.825 |
1.814 |
| CB |
HB2 |
1.114 |
1.090 |
| CB |
HB3 |
1.115 |
1.090 |
| SG |
HG |
0.951 |
1.345 |
| OXT |
C1 |
2.808 |
1.452 |
| C1 |
H11 |
1.115 |
1.090 |
| C1 |
H12 |
1.115 |
1.090 |
| C1 |
H13 |
1.115 |
1.089 |
Bond Angles for CMT
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
112.0 |
106.7 |
| CA |
N |
H2 |
111.3 |
106.7 |
| N |
CA |
C |
112.0 |
109.5 |
| N |
CA |
CB |
108.9 |
109.5 |
| N |
CA |
HA |
108.6 |
109.4 |
| H |
N |
H2 |
111.2 |
106.7 |
| C |
CA |
CB |
110.9 |
109.5 |
| C |
CA |
HA |
106.6 |
109.5 |
| CA |
C |
O |
117.5 |
120.0 |
| CA |
C |
OXT |
118.6 |
120.0 |
| CB |
CA |
HA |
109.7 |
109.5 |
| CA |
CB |
SG |
113.7 |
109.5 |
| CA |
CB |
HB2 |
110.7 |
109.5 |
| CA |
CB |
HB3 |
110.7 |
109.5 |
| O |
C |
OXT |
123.9 |
120.0 |
| C |
OXT |
C1 |
58.7 |
120.0 |
| SG |
CB |
HB2 |
110.6 |
109.5 |
| SG |
CB |
HB3 |
110.6 |
109.5 |
| CB |
SG |
HG |
113.7 |
100.0 |
| HB2 |
CB |
HB3 |
99.6 |
109.5 |
| OXT |
C1 |
H11 |
58.6 |
109.5 |
| OXT |
C1 |
H12 |
135.7 |
109.5 |
| OXT |
C1 |
H13 |
135.7 |
109.5 |
| H11 |
C1 |
H12 |
135.8 |
109.4 |
| H11 |
C1 |
H13 |
135.8 |
109.5 |
| H12 |
C1 |
H13 |
69.5 |
109.5 |
Torsion Angles for CMT
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
125.2 |
113.7 |
| C |
CA |
N |
CB |
123.1 |
120.0 |
| C |
CA |
N |
HA |
242.6 |
240.0 |
| N |
CA |
C |
O |
46.7 |
330.0 |
| N |
CA |
C |
OXT |
226.0 |
150.0 |
| CB |
CA |
N |
HA |
119.5 |
120.0 |
| N |
CA |
CB |
SG |
329.5 |
300.0 |
| N |
CA |
CB |
HB2 |
94.7 |
60.0 |
| N |
CA |
CB |
HB3 |
204.2 |
180.0 |
| CA |
N |
H |
H2 |
234.7 |
246.2 |
| H |
N |
CA |
C |
180.0 |
173.7 |
| H |
N |
CA |
CB |
56.9 |
53.7 |
| H |
N |
CA |
HA |
297.4 |
293.7 |
| CA |
N |
H2 |
H |
125.7 |
113.8 |
| H2 |
N |
CA |
C |
54.8 |
60.0 |
| H2 |
N |
CA |
CB |
291.7 |
300.0 |
| H2 |
N |
CA |
HA |
172.2 |
180.0 |
| C |
CA |
N |
H |
180.0 |
173.7 |
| C |
CA |
N |
H2 |
54.8 |
60.0 |
| N |
CA |
C |
CB |
238.0 |
240.0 |
| N |
CA |
C |
HA |
118.6 |
119.9 |
| CB |
CA |
C |
HA |
240.6 |
239.9 |
| C |
CA |
CB |
SG |
205.7 |
180.0 |
| C |
CA |
CB |
HB2 |
331.0 |
300.0 |
| C |
CA |
CB |
HB3 |
80.5 |
60.0 |
| O |
C |
CA |
OXT |
180.6 |
180.1 |
| CA |
C |
OXT |
C1 |
180.4 |
180.0 |
| CB |
CA |
N |
H |
56.9 |
53.7 |
| CB |
CA |
N |
H2 |
291.7 |
300.0 |
| N |
CA |
CB |
C |
123.8 |
120.0 |
| N |
CA |
CB |
HA |
241.2 |
240.0 |
| C |
CA |
CB |
HA |
117.5 |
120.0 |
| CB |
CA |
C |
O |
168.6 |
90.0 |
| CB |
CA |
C |
OXT |
348.0 |
270.0 |
| SG |
CB |
CA |
HB2 |
234.7 |
240.0 |
| SG |
CB |
CA |
HB3 |
125.2 |
120.0 |
| CA |
CB |
SG |
HG |
180.0 |
180.0 |
| HB2 |
CB |
CA |
HB3 |
250.5 |
240.0 |
| HA |
CA |
N |
H |
297.4 |
293.7 |
| HA |
CA |
N |
H2 |
172.2 |
180.0 |
| N |
CA |
HA |
C |
239.1 |
240.0 |
| N |
CA |
HA |
CB |
119.0 |
120.0 |
| C |
CA |
HA |
CB |
239.9 |
240.0 |
| HA |
CA |
C |
O |
288.0 |
210.1 |
| HA |
CA |
C |
OXT |
107.4 |
30.0 |
| HA |
CA |
CB |
SG |
88.2 |
60.0 |
| HA |
CA |
CB |
HB2 |
213.5 |
180.0 |
| HA |
CA |
CB |
HB3 |
323.0 |
300.0 |
| O |
C |
CA |
CB |
168.6 |
90.0 |
| O |
C |
CA |
HA |
288.0 |
210.1 |
| CA |
C |
O |
OXT |
179.4 |
179.9 |
| O |
C |
OXT |
C1 |
359.8 |
359.9 |
| OXT |
C |
CA |
CB |
348.0 |
270.0 |
| OXT |
C |
CA |
HA |
107.4 |
30.0 |
| CA |
C |
OXT |
O |
180.6 |
180.1 |
| C |
OXT |
C1 |
H11 |
180.0 |
180.1 |
| C |
OXT |
C1 |
H12 |
305.3 |
300.0 |
| C |
OXT |
C1 |
H13 |
54.7 |
60.0 |
| SG |
CB |
CA |
HA |
88.2 |
60.0 |
| CA |
CB |
SG |
HB2 |
125.3 |
120.0 |
| CA |
CB |
SG |
HB3 |
234.8 |
240.0 |
| HB2 |
CB |
SG |
HB3 |
109.5 |
120.0 |
| HB2 |
CB |
CA |
HA |
213.5 |
180.0 |
| CA |
CB |
HB2 |
SG |
233.0 |
240.0 |
| CA |
CB |
HB2 |
HB3 |
116.6 |
120.0 |
| SG |
CB |
HB2 |
HB3 |
243.5 |
240.0 |
| HB2 |
CB |
SG |
HG |
54.8 |
60.1 |
| HB3 |
CB |
CA |
HA |
323.0 |
300.0 |
| CA |
CB |
HB3 |
SG |
126.9 |
120.0 |
| CA |
CB |
HB3 |
HB2 |
243.4 |
240.0 |
| SG |
CB |
HB3 |
HB2 |
116.5 |
120.0 |
| HB3 |
CB |
SG |
HG |
305.3 |
300.0 |
| HG |
SG |
CB |
HB2 |
54.8 |
60.1 |
| HG |
SG |
CB |
HB3 |
305.3 |
300.0 |
| H11 |
C1 |
OXT |
H12 |
234.8 |
240.0 |
| H11 |
C1 |
OXT |
H13 |
125.3 |
120.0 |
| H12 |
C1 |
OXT |
H13 |
250.5 |
240.0 |
| OXT |
C1 |
H11 |
H12 |
125.2 |
120.0 |
| OXT |
C1 |
H11 |
H13 |
234.8 |
239.9 |
| H12 |
C1 |
H11 |
H13 |
109.6 |
119.9 |
| OXT |
C1 |
H12 |
H11 |
270.9 |
240.0 |
| OXT |
C1 |
H12 |
H13 |
135.4 |
120.0 |
| H11 |
C1 |
H12 |
H13 |
224.5 |
240.0 |
| OXT |
C1 |
H13 |
H11 |
89.2 |
120.1 |
| OXT |
C1 |
H13 |
H12 |
224.7 |
240.0 |
| H11 |
C1 |
H13 |
H12 |
135.5 |
119.9 |