PDB Chemical Component CME
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CME
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.469 |
1.470 |
| N |
H |
0.983 |
1.009 |
| N |
H2 |
1.021 |
1.008 |
| CA |
CB |
1.530 |
1.529 |
| CA |
C |
1.522 |
1.506 |
| CA |
HA |
1.116 |
1.090 |
| CB |
SG |
1.836 |
1.812 |
| CB |
HB2 |
1.114 |
1.090 |
| CB |
HB3 |
1.116 |
1.091 |
| SG |
SD |
2.037 |
2.050 |
| SD |
CE |
1.830 |
1.813 |
| CE |
CZ |
1.520 |
1.529 |
| CE |
HE2 |
1.115 |
1.090 |
| CE |
HE3 |
1.115 |
1.090 |
| CZ |
OH |
1.427 |
1.429 |
| CZ |
HZ2 |
1.115 |
1.089 |
| CZ |
HZ3 |
1.116 |
1.090 |
| OH |
HH |
0.950 |
0.966 |
| C |
O |
1.234 |
1.208 |
| C |
OXT |
1.327 |
1.342 |
| OXT |
HXT |
0.949 |
0.967 |
Bond Angles for CME
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
117.5 |
106.7 |
| CA |
N |
H2 |
112.0 |
106.7 |
| N |
CA |
CB |
110.2 |
109.5 |
| N |
CA |
C |
111.3 |
109.4 |
| N |
CA |
HA |
107.1 |
109.4 |
| H |
N |
H2 |
121.0 |
106.7 |
| CB |
CA |
C |
107.3 |
109.6 |
| CB |
CA |
HA |
111.1 |
109.4 |
| CA |
CB |
SG |
114.9 |
109.5 |
| CA |
CB |
HB2 |
110.3 |
109.5 |
| CA |
CB |
HB3 |
110.2 |
109.5 |
| C |
CA |
HA |
110.0 |
109.5 |
| CA |
C |
O |
120.7 |
120.0 |
| CA |
C |
OXT |
116.4 |
120.0 |
| SG |
CB |
HB2 |
110.2 |
109.5 |
| SG |
CB |
HB3 |
110.2 |
109.4 |
| CB |
SG |
SD |
102.8 |
100.0 |
| HB2 |
CB |
HB3 |
100.0 |
109.5 |
| SG |
SD |
CE |
104.8 |
100.0 |
| SD |
CE |
CZ |
115.1 |
109.5 |
| SD |
CE |
HE2 |
110.2 |
109.5 |
| SD |
CE |
HE3 |
110.2 |
109.5 |
| CZ |
CE |
HE2 |
110.1 |
109.5 |
| CZ |
CE |
HE3 |
110.1 |
109.4 |
| CE |
CZ |
OH |
115.8 |
109.6 |
| CE |
CZ |
HZ2 |
109.9 |
109.5 |
| CE |
CZ |
HZ3 |
110.0 |
109.5 |
| HE2 |
CE |
HE3 |
100.1 |
109.5 |
| OH |
CZ |
HZ2 |
109.9 |
109.5 |
| OH |
CZ |
HZ3 |
109.9 |
109.4 |
| CZ |
OH |
HH |
115.8 |
106.9 |
| HZ2 |
CZ |
HZ3 |
100.3 |
109.4 |
| O |
C |
OXT |
123.0 |
120.0 |
| C |
OXT |
HXT |
116.4 |
120.0 |
Torsion Angles for CME
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
213.2 |
113.8 |
| CB |
CA |
N |
C |
241.1 |
239.9 |
| CB |
CA |
N |
HA |
120.9 |
119.9 |
| N |
CA |
CB |
SG |
58.8 |
178.8 |
| N |
CA |
CB |
HB2 |
184.1 |
298.8 |
| N |
CA |
CB |
HB3 |
293.5 |
58.9 |
| C |
CA |
N |
HA |
239.8 |
240.0 |
| N |
CA |
C |
O |
340.9 |
330.0 |
| N |
CA |
C |
OXT |
161.1 |
150.1 |
| CA |
N |
H |
H2 |
143.7 |
246.2 |
| H |
N |
CA |
CB |
268.0 |
59.4 |
| H |
N |
CA |
C |
26.8 |
179.4 |
| H |
N |
CA |
HA |
147.1 |
299.4 |
| CA |
N |
H2 |
H |
214.5 |
113.8 |
| H2 |
N |
CA |
CB |
54.8 |
305.6 |
| H2 |
N |
CA |
C |
173.6 |
65.6 |
| H2 |
N |
CA |
HA |
293.9 |
185.6 |
| CB |
CA |
N |
H |
268.0 |
59.4 |
| CB |
CA |
N |
H2 |
54.8 |
305.6 |
| N |
CA |
CB |
C |
121.3 |
120.0 |
| N |
CA |
CB |
HA |
241.5 |
240.1 |
| C |
CA |
CB |
HA |
120.2 |
120.1 |
| CB |
CA |
C |
O |
101.4 |
90.0 |
| CB |
CA |
C |
OXT |
281.7 |
270.1 |
| SG |
CB |
CA |
HB2 |
234.7 |
240.0 |
| SG |
CB |
CA |
HB3 |
125.3 |
120.0 |
| CA |
CB |
SG |
SD |
202.7 |
75.1 |
| HB2 |
CB |
CA |
HB3 |
250.5 |
240.0 |
| C |
CA |
N |
H |
26.8 |
179.4 |
| C |
CA |
N |
H2 |
173.6 |
65.6 |
| N |
CA |
C |
CB |
239.4 |
240.0 |
| N |
CA |
C |
HA |
118.5 |
120.0 |
| CB |
CA |
C |
HA |
239.1 |
240.0 |
| C |
CA |
CB |
SG |
297.5 |
58.8 |
| C |
CA |
CB |
HB2 |
62.8 |
178.8 |
| C |
CA |
CB |
HB3 |
172.2 |
298.9 |
| O |
C |
CA |
OXT |
179.7 |
179.9 |
| CA |
C |
OXT |
HXT |
180.0 |
179.9 |
| HA |
CA |
N |
H |
147.1 |
299.4 |
| HA |
CA |
N |
H2 |
293.9 |
185.6 |
| N |
CA |
HA |
CB |
120.3 |
119.9 |
| N |
CA |
HA |
C |
239.0 |
240.1 |
| CB |
CA |
HA |
C |
118.7 |
120.1 |
| HA |
CA |
CB |
SG |
177.2 |
298.8 |
| HA |
CA |
CB |
HB2 |
302.5 |
58.8 |
| HA |
CA |
CB |
HB3 |
52.0 |
178.8 |
| HA |
CA |
C |
O |
222.4 |
210.0 |
| HA |
CA |
C |
OXT |
42.6 |
30.1 |
| SG |
CB |
CA |
C |
297.5 |
58.8 |
| SG |
CB |
CA |
HA |
177.2 |
298.8 |
| CA |
CB |
SG |
HB2 |
125.3 |
120.1 |
| CA |
CB |
SG |
HB3 |
234.8 |
240.0 |
| HB2 |
CB |
SG |
HB3 |
109.5 |
120.0 |
| CB |
SG |
SD |
CE |
92.4 |
90.0 |
| HB2 |
CB |
CA |
C |
62.8 |
178.8 |
| HB2 |
CB |
CA |
HA |
302.5 |
58.8 |
| CA |
CB |
HB2 |
SG |
232.1 |
240.0 |
| CA |
CB |
HB2 |
HB3 |
116.1 |
120.0 |
| SG |
CB |
HB2 |
HB3 |
243.9 |
240.0 |
| HB2 |
CB |
SG |
SD |
77.4 |
315.0 |
| HB3 |
CB |
CA |
C |
172.2 |
298.9 |
| HB3 |
CB |
CA |
HA |
52.0 |
178.8 |
| CA |
CB |
HB3 |
SG |
127.8 |
120.0 |
| CA |
CB |
HB3 |
HB2 |
243.9 |
239.9 |
| SG |
CB |
HB3 |
HB2 |
116.1 |
120.0 |
| HB3 |
CB |
SG |
SD |
328.0 |
195.0 |
| SD |
SG |
CB |
HB2 |
77.4 |
315.0 |
| SD |
SG |
CB |
HB3 |
328.0 |
195.0 |
| SG |
SD |
CE |
CZ |
311.9 |
60.0 |
| SG |
SD |
CE |
HE2 |
77.2 |
180.0 |
| SG |
SD |
CE |
HE3 |
186.7 |
300.0 |
| CZ |
CE |
SD |
HE2 |
234.7 |
240.0 |
| CZ |
CE |
SD |
HE3 |
125.2 |
120.0 |
| SD |
CE |
CZ |
OH |
307.5 |
180.0 |
| SD |
CE |
CZ |
HZ2 |
72.8 |
300.0 |
| SD |
CE |
CZ |
HZ3 |
182.2 |
60.0 |
| HE2 |
CE |
SD |
HE3 |
250.5 |
240.0 |
| SD |
CE |
CZ |
HE2 |
125.3 |
120.1 |
| SD |
CE |
CZ |
HE3 |
234.7 |
240.0 |
| HE2 |
CE |
CZ |
HE3 |
109.4 |
119.9 |
| OH |
CZ |
CE |
HZ2 |
234.7 |
239.9 |
| OH |
CZ |
CE |
HZ3 |
125.2 |
119.9 |
| CE |
CZ |
OH |
HH |
180.0 |
180.0 |
| HZ2 |
CZ |
CE |
HZ3 |
250.5 |
240.0 |
| SD |
CE |
HE2 |
CZ |
232.0 |
239.9 |
| SD |
CE |
HE2 |
HE3 |
116.0 |
120.0 |
| CZ |
CE |
HE2 |
HE3 |
244.1 |
240.1 |
| HE2 |
CE |
CZ |
OH |
182.2 |
59.9 |
| HE2 |
CE |
CZ |
HZ2 |
307.4 |
180.0 |
| HE2 |
CE |
CZ |
HZ3 |
56.9 |
300.0 |
| SD |
CE |
HE3 |
CZ |
128.0 |
120.0 |
| SD |
CE |
HE3 |
HE2 |
244.0 |
240.0 |
| CZ |
CE |
HE3 |
HE2 |
115.9 |
119.9 |
| HE3 |
CE |
CZ |
OH |
72.7 |
300.0 |
| HE3 |
CE |
CZ |
HZ2 |
198.0 |
60.0 |
| HE3 |
CE |
CZ |
HZ3 |
307.5 |
180.0 |
| OH |
CZ |
CE |
HE2 |
182.2 |
59.9 |
| OH |
CZ |
CE |
HE3 |
72.7 |
300.0 |
| CE |
CZ |
OH |
HZ2 |
125.3 |
120.1 |
| CE |
CZ |
OH |
HZ3 |
234.7 |
240.0 |
| HZ2 |
CZ |
OH |
HZ3 |
109.4 |
119.9 |
| HZ2 |
CZ |
CE |
HE2 |
307.4 |
180.0 |
| HZ2 |
CZ |
CE |
HE3 |
198.0 |
60.0 |
| CE |
CZ |
HZ2 |
OH |
231.4 |
239.9 |
| CE |
CZ |
HZ2 |
HZ3 |
115.8 |
120.0 |
| OH |
CZ |
HZ2 |
HZ3 |
244.3 |
240.1 |
| HZ2 |
CZ |
OH |
HH |
54.7 |
59.9 |
| HZ3 |
CZ |
CE |
HE2 |
56.9 |
300.0 |
| HZ3 |
CZ |
CE |
HE3 |
307.5 |
180.0 |
| CE |
CZ |
HZ3 |
OH |
128.5 |
120.1 |
| CE |
CZ |
HZ3 |
HZ2 |
244.2 |
240.0 |
| OH |
CZ |
HZ3 |
HZ2 |
115.7 |
119.9 |
| HZ3 |
CZ |
OH |
HH |
305.3 |
300.0 |
| HH |
OH |
CZ |
HZ2 |
54.7 |
59.9 |
| HH |
OH |
CZ |
HZ3 |
305.3 |
300.0 |
| O |
C |
CA |
HA |
222.4 |
210.0 |
| CA |
C |
O |
OXT |
180.3 |
180.1 |
| O |
C |
OXT |
HXT |
0.3 |
0.0 |
| OXT |
C |
CA |
HA |
42.6 |
30.1 |
| CA |
C |
OXT |
O |
179.7 |
179.9 |