PDB Chemical Component CM5

Ideal Model

Chemical Description

Name 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE
Synonyms 5-CYCLOHEXYLPENTYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE; CYMAL-5
Formula C23 H42 O11
Formal charge 0
Molecular weight 494.573 g/mol
Component type NON-POLYMER

Chemical features

Atom count 76
Chiral atom count 10
Chiral atoms C13 C18 C17 C15 C16 C24 C26 C27 C28 C29
Bond count 78
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 5-cyclohexylpentyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside
Systematic name (OpenEye OEToolkits) (2R,3R,4S,5S,6R)-2-[(2R,3S,4R,5R,6R)-6-(5-cyclohexylpentoxy)-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H]1O[C@H](O[C@H]2[C@H](O)[C@@H](O)[C@H](OCCCCCC3CCCCC3)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@@H]1O
SMILES (CACTVS) OC[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](OCCCCCC3CCCCC3)O[CH]2CO)[CH](O)[CH](O)[CH]1O
Stereo SMILES (OpenEye) C1CCC(CC1)CCCCCO[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O
InChI descriptor InChI=1S/C23H42O11/c24-11-14-16(26)17(27)19(29)23(32-14)34-21-15(12-25)33-22(20(30)18(21)28)31-10-6-2-5-9-13-7-3-1-4-8-13/h13-30H,1-12H2/t14-,15-,16-,17+,18-,19-,20-,21-,22-,23-/m1/s1
InChIKey descriptor RVTGFZGNOSKUDA-ZNGNCRBCSA-N

Status Information

Last modified 2020-06-17
Created 2005-10-27
Release status REL
Model PDB code 2BDM
Processing site RCSB