PDB Chemical Component CLM

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CLM

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	CL1	1.705	1.802
C1	CL2	1.770	1.803
C1	C2	1.591	1.507
C1	H1	1.114	1.090
C2	O2	1.202	1.212
C2	N2	1.322	1.347
N2	C3	1.457	1.464
N2	HN2	1.020	0.970
C3	C4	1.519	1.530
C3	C5	1.523	1.529
C3	H3	1.116	1.090
C4	O4	1.481	1.429
C4	H41	1.115	1.091
C4	H42	1.115	1.090
O4	HO4	0.949	0.967
C5	O5	1.423	1.428
C5	C6	1.498	1.507
C5	H5	1.115	1.090
O5	HO5	0.950	0.967
C6	C7	1.451	1.385
C6	C11	1.380	1.385
C7	C8	1.371	1.376
C7	H7	1.102	1.080
C8	C9	1.328	1.405
C8	H8	1.104	1.080
C9	N9	1.482	1.346
C9	C10	1.420	1.404
N9	O9A	1.196	1.217
N9	O9B	1.232	1.218
C10	C11	1.384	1.377
C10	H10	1.103	1.080
C11	H11	1.103	1.080

Bond Angles for CLM

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CL1	C1	CL2	105.6	109.4
CL1	C1	C2	106.5	109.5
CL1	C1	H1	112.1	109.5
CL2	C1	C2	104.0	109.5
CL2	C1	H1	114.3	109.5
C2	C1	H1	113.5	109.5
C1	C2	O2	119.2	120.0
C1	C2	N2	111.2	120.0
O2	C2	N2	129.4	120.0
C2	N2	C3	125.2	120.0
C2	N2	HN2	112.1	119.9
C3	N2	HN2	122.7	120.0
N2	C3	C4	110.4	109.5
N2	C3	C5	111.6	109.5
N2	C3	H3	109.9	109.5
C4	C3	C5	116.0	109.4
C4	C3	H3	104.9	109.4
C3	C4	O4	106.4	109.5
C3	C4	H41	113.3	109.5
C3	C4	H42	113.4	109.5
C5	C3	H3	103.5	109.5
C3	C5	O5	108.5	109.5
C3	C5	C6	107.8	109.4
C3	C5	H5	111.2	109.5
O4	C4	H41	113.4	109.4
O4	C4	H42	113.3	109.5
C4	O4	HO4	106.4	106.8
H41	C4	H42	97.1	109.5
O5	C5	C6	109.3	109.4
O5	C5	H5	109.7	109.4
C5	O5	HO5	108.4	106.8
C6	C5	H5	110.3	109.5
C5	C6	C7	115.2	119.8
C5	C6	C11	124.8	119.8
C7	C6	C11	119.8	120.5
C6	C7	C8	120.4	120.2
C6	C7	H7	122.7	119.9
C6	C11	C10	118.9	120.2
C6	C11	H11	120.4	119.9
C8	C7	H7	116.9	119.9
C7	C8	C9	117.9	119.8
C7	C8	H8	122.6	120.1
C9	C8	H8	119.5	120.2
C8	C9	N9	123.6	120.2
C8	C9	C10	124.3	119.5
N9	C9	C10	111.8	120.2
C9	N9	O9A	118.7	120.0
C9	N9	O9B	116.1	120.0
C9	C10	C11	118.4	119.8
C9	C10	H10	122.0	120.1
O9A	N9	O9B	125.2	120.0
C11	C10	H10	119.6	120.1
C10	C11	H11	120.7	119.8

Torsion Angles for CLM

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CL2	C1	CL1	C2	249.9	240.0
CL2	C1	CL1	H1	125.1	120.0
C2	C1	CL1	H1	235.3	239.9
CL1	C1	C2	O2	317.5	0.0
CL1	C1	C2	N2	141.1	180.0
CL1	C1	CL2	C2	111.9	120.0
CL1	C1	CL2	H1	236.2	240.0
C2	C1	CL2	H1	124.3	120.0
CL2	C1	C2	O2	68.8	120.0
CL2	C1	C2	N2	252.4	300.0
CL1	C1	C2	CL2	248.7	240.0
CL1	C1	C2	H1	123.9	120.0
CL2	C1	C2	H1	235.1	240.0
O2	C2	C1	N2	176.4	180.1
C1	C2	N2	C3	181.8	180.0
C1	C2	N2	HN2	1.8	0.0
CL1	C1	H1	CL2	120.2	119.9
CL1	C1	H1	C2	239.3	239.9
CL2	C1	H1	C2	119.1	120.0
H1	C1	C2	O2	193.7	240.0
H1	C1	C2	N2	17.2	60.0
O2	C2	C1	H1	193.7	240.0
C1	C2	O2	N2	184.3	179.9
O2	C2	N2	C3	5.9	360.0
O2	C2	N2	HN2	185.9	180.0
N2	C2	C1	H1	17.2	60.0
C1	C2	N2	O2	176.0	180.1
C3	N2	C2	HN2	180.0	180.0
C2	N2	C3	C4	232.2	270.1
C2	N2	C3	C5	101.7	150.1
C2	N2	C3	H3	347.5	30.0
C2	N2	C3	HN2	180.0	180.0
C4	C3	N2	C5	130.6	120.0
C4	C3	N2	H3	244.8	240.1
N2	C3	C4	O4	182.3	300.0
N2	C3	C4	H41	307.5	180.0
N2	C3	C4	H42	57.0	60.0
C5	C3	N2	H3	114.2	120.1
N2	C3	C5	O5	67.4	60.0
N2	C3	C5	C6	309.2	300.0
N2	C3	C5	H5	188.1	180.0
C2	N2	HN2	C3	180.0	180.0
HN2	N2	C3	C4	52.3	90.0
HN2	N2	C3	C5	281.7	330.0
HN2	N2	C3	H3	167.5	210.0
C4	C3	N2	HN2	52.3	90.0
N2	C3	C4	C5	231.8	240.0
N2	C3	C4	H3	118.4	120.0
C5	C3	C4	H3	246.5	240.0
C4	C3	C5	O5	299.8	300.0
C4	C3	C5	C6	181.6	180.0
C4	C3	C5	H5	60.5	60.0
O4	C4	C3	H41	234.7	119.9
O4	C4	C3	H42	125.2	240.0
C3	C4	O4	HO4	180.0	180.0
H41	C4	C3	H42	250.5	120.1
C5	C3	N2	HN2	281.7	330.0
N2	C3	C5	C4	127.6	120.0
N2	C3	C5	H3	241.8	239.9
C4	C3	C5	H3	114.2	119.9
C5	C3	C4	O4	310.4	60.0
C5	C3	C4	H41	75.7	300.1
C5	C3	C4	H42	185.2	180.0
O5	C5	C3	C6	118.3	120.0
O5	C5	C3	H5	239.3	240.0
C3	C5	O5	HO5	180.0	300.0
C6	C5	C3	H5	121.0	120.0
C3	C5	C6	C7	270.4	90.0
C3	C5	C6	C11	95.9	269.7
H3	C3	N2	HN2	167.5	210.0
N2	C3	H3	C4	241.3	240.0
N2	C3	H3	C5	119.3	120.1
C4	C3	H3	C5	238.0	240.1
H3	C3	C4	O4	63.9	180.0
H3	C3	C4	H41	189.2	60.1
H3	C3	C4	H42	298.6	300.0
H3	C3	C5	O5	185.6	180.0
H3	C3	C5	C6	67.3	60.0
H3	C3	C5	H5	306.3	300.1
O4	C4	C3	C5	310.4	60.0
O4	C4	C3	H3	63.9	180.0
C3	C4	O4	H41	125.2	240.0
C3	C4	O4	H42	234.7	120.1
H41	C4	O4	H42	109.5	240.0
H41	C4	C3	C5	75.7	300.1
H41	C4	C3	H3	189.2	60.1
C3	C4	H41	O4	238.6	120.0
C3	C4	H41	H42	119.3	239.9
O4	C4	H41	H42	240.7	120.0
H41	C4	O4	HO4	54.8	299.9
H42	C4	C3	C5	185.2	180.0
H42	C4	C3	H3	298.6	300.0
C3	C4	H42	O4	121.4	240.0
C3	C4	H42	H41	240.8	120.1
O4	C4	H42	H41	119.3	240.1
H42	C4	O4	HO4	305.2	59.9
HO4	O4	C4	H41	54.8	299.9
HO4	O4	C4	H42	305.2	59.9
O5	C5	C3	H3	185.6	180.0
C3	C5	O5	C6	242.7	240.0
C3	C5	O5	H5	121.6	120.1
C6	C5	O5	H5	238.9	240.1
O5	C5	C6	C7	152.7	330.0
O5	C5	C6	C11	338.2	149.7
C6	C5	C3	H3	67.3	60.0
C3	C5	C6	O5	117.7	120.0
C3	C5	C6	H5	238.4	240.0
O5	C5	C6	H5	120.7	119.9
C6	C5	O5	HO5	297.3	60.0
C7	C6	C5	C11	174.5	180.3
C5	C6	C7	C8	186.6	180.0
C5	C6	C7	H7	6.6	359.9
C5	C6	C11	C10	175.2	179.7
C5	C6	C11	H11	355.2	0.3
H5	C5	C3	H3	306.3	300.1
C3	C5	H5	O5	240.0	239.9
C3	C5	H5	C6	119.6	120.0
O5	C5	H5	C6	239.5	240.1
H5	C5	O5	HO5	58.4	180.0
H5	C5	C6	C7	32.0	210.0
H5	C5	C6	C11	217.5	29.8
HO5	O5	C5	C6	297.3	60.0
HO5	O5	C5	H5	58.4	180.0
C7	C6	C5	H5	32.0	210.0
C5	C6	C7	C11	185.2	179.7
C7	C6	C11	C10	0.9	359.4
C7	C6	C11	H11	180.9	180.0
C8	C7	C6	H7	180.0	180.1
C6	C7	C8	C9	0.3	0.0
C6	C7	C8	H8	180.3	180.0
C11	C6	C5	H5	217.5	29.8
C5	C6	C11	C7	174.3	180.3
C11	C6	C7	C8	1.4	0.3
C11	C6	C7	H7	181.4	180.2
C9	C10	C11	C6	355.4	0.6
C6	C11	C10	H10	175.4	180.3
C10	C11	C6	H11	180.0	179.4
C8	C7	C6	C11	1.4	0.3
C6	C7	C8	H7	180.0	179.9
C9	C8	C7	H8	180.0	180.0
C7	C8	C9	N9	182.2	180.0
C7	C8	C9	C10	355.7	360.0
H7	C7	C6	C11	181.4	180.2
C6	C7	H7	C8	180.0	180.1
H7	C7	C8	C9	180.3	180.1
H7	C7	C8	H8	0.3	0.1
C9	C8	C7	H7	180.3	180.1
C7	C8	C9	H8	180.0	180.0
N9	C9	C8	C10	186.5	180.0
C8	C9	N9	O9A	161.9	180.0
C8	C9	N9	O9B	342.8	360.0
C8	C9	C10	C11	6.6	359.7
C8	C9	C10	H10	186.6	180.0
H8	C8	C7	H7	0.3	0.1
C7	C8	H8	C9	180.0	180.0
H8	C8	C9	N9	2.2	0.0
H8	C8	C9	C10	175.7	180.0
N9	C9	C8	H8	2.2	0.0
C8	C9	N9	C10	174.2	180.0
N9	C9	C10	C11	180.7	179.7
N9	C9	C10	H10	0.8	360.0
O9A	N9	C9	O9B	179.0	180.0
C6	C11	C10	C9	355.4	0.6
C10	C9	C8	H8	175.7	180.0
C8	C9	C10	N9	185.9	180.0
C10	C9	N9	O9A	347.7	360.0
C10	C9	N9	O9B	168.7	180.0
C11	C10	C9	H10	180.0	179.7
C9	C10	C11	H11	175.4	180.0
O9A	N9	C9	C10	347.7	360.0
C9	N9	O9A	O9B	181.1	180.0
O9B	N9	C9	C10	168.7	180.0
C9	N9	O9B	O9A	179.0	180.0
C6	C11	C10	H11	180.0	180.6
C9	C10	C11	H10	180.0	180.3
C9	C10	H10	C11	180.0	179.7
H10	C10	C11	H11	355.4	359.7
C6	C11	H11	C10	180.0	179.4
H11	C11	C10	H10	355.4	359.7