PDB Chemical Component CLH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CLH

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.491 1.441
N H 1.000 1.007
N H2 1.000 1.007
CA CB 1.529 1.530
CA C 1.531 1.516
CA HA 1.100 1.094
CB CG 1.529 1.534
CB HB2 1.100 1.098
CB HB3 1.100 1.098
CG CD 1.530 1.533
CG HG2 1.100 1.097
CG HG3 1.100 1.096
CD CE 1.530 1.530
CD HD2 1.100 1.095
CD HD3 1.100 1.097
CE NZ 1.489 1.458
CE HE2 1.100 1.095
CE HE3 1.100 1.096
NZ CH 1.304 1.382
NZ HZ 1.000 1.010
CH OI 1.215 1.228
CH CI 1.530 1.507
CI NJ 1.490 1.471
CI HI1 1.100 1.094
CI HI2 1.100 1.094
NJ CK 1.304 1.362
NJ HNJ 1.000 1.004
CK OL 1.215 1.220
CK CL 1.380 1.498
C O 1.214 1.224
C OXT   1.359
CL OM   1.219
CL HL 1.080 1.101
OXT HXT   0.982

Bond Angles for CLH

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA N H 109.5 119.1
CA N H2 109.5 119.0
N CA CB 105.1 112.5
N CA C 110.2 106.4
N CA HA 112.3 106.2
H N H2 109.4 120.5
CB CA C 110.5 110.2
CB CA HA 111.9 112.3
CA CB CG 109.5 114.6
CA CB HB2 109.5 109.4
CA CB HB3 109.5 109.5
C CA HA 107.0 109.0
CA C O 121.1 125.3
CA C OXT   111.9
CG CB HB2 109.4 108.1
CG CB HB3 109.4 109.0
CB CG CD 109.5 113.2
CB CG HG2 109.4 107.9
CB CG HG3 109.4 109.6
HB2 CB HB3 109.5 105.9
CD CG HG2 109.5 109.0
CD CG HG3 109.5 110.3
CG CD CE 109.5 113.0
CG CD HD2 109.4 110.2
CG CD HD3 109.4 109.2
HG2 CG HG3 109.5 106.5
CE CD HD2 109.4 109.2
CE CD HD3 109.5 108.3
CD CE NZ 105.0 112.0
CD CE HE2 112.0 110.0
CD CE HE3 111.0 109.1
HD2 CD HD3 109.5 106.8
NZ CE HE2 112.0 109.2
NZ CE HE3 111.0 109.0
CE NZ CH 120.0 122.8
CE NZ HZ 120.0 118.6
HE2 CE HE3 106.0 107.4
CH NZ HZ 120.0 118.6
NZ CH OI 121.2 125.7
NZ CH CI 117.5 110.9
OI CH CI 121.2 123.4
CH CI NJ 109.6 109.6
CH CI HI1 109.4 109.7
CH CI HI2 109.5 109.8
NJ CI HI1 109.4 109.2
NJ CI HI2 109.4 109.2
CI NJ CK 120.0 122.0
CI NJ HNJ 120.0 119.0
HI1 CI HI2 109.6 109.3
CK NJ HNJ 120.0 119.0
NJ CK OL 124.7 130.1
NJ CK CL 112.0 111.5
OL CK CL 123.3 118.3
CK CL OM   119.5
CK CL HL 126.0 115.6
O C OXT   122.8
C OXT HXT   115.3
OM CL HL   124.9

Torsion Angles for CLH

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H N CA H2 120.0 166.5
CB CA N C 240.9 239.3
CB CA N HA 121.8 123.2
N CA CB CG 249.4 297.0
N CA CB HB2 129.4 58.6
N CA CB HB3 9.4 174.2
C CA N HA 240.9 244.0
N CA C O 253.3 324.2
N CA C OXT   146.6
CA N H H2 240.0 193.7
H N CA CB 21.2 167.1
H N CA C 140.3 287.8
H N CA HA 259.4 43.9
CA N H2 H 120.0 166.3
H2 N CA CB 261.3 0.6
H2 N CA C 20.4 121.3
H2 N CA HA 139.5 237.4
CB CA N H 21.2 167.1
CB CA N H2 261.3 0.6
N CA CB C 118.8 118.6
N CA CB HA 237.9 240.2
C CA CB HA 119.1 121.7
CB CA C O 9.0 86.4
CB CA C OXT   268.8
CG CB CA HB2 120.0 238.5
CG CB CA HB3 240.0 122.8
CA CB CG CD 271.8 182.3
CA CB CG HG2 151.8 61.6
CA CB CG HG3 31.8 305.9
HB2 CB CA HB3 120.1 244.3
C CA N H 140.3 287.8
C CA N H2 20.4 121.3
N CA C CB 244.3 237.8
N CA C HA 122.3 114.2
CB CA C HA 238.0 236.4
C CA CB CG 130.6 178.5
C CA CB HB2 10.6 300.0
C CA CB HB3 250.5 55.7
O C CA OXT   177.6
CA C OXT HXT   177.7
HA CA N H 259.4 43.9
HA CA N H2 139.5 237.4
N CA HA CB 117.9 123.3
N CA HA C 239.0 245.7
CB CA HA C 121.2 122.3
HA CA CB CG 11.5 56.8
HA CA CB HB2 251.5 178.4
HA CA CB HB3 131.5 294.0
HA CA C O 131.0 210.0
HA CA C OXT   32.4
CG CB CA C 130.6 178.5
CG CB CA HA 11.5 56.8
CA CB CG HB2 240.0 122.2
CA CB CG HB3 120.0 236.9
HB2 CB CG HB3 240.0 114.7
CD CG CB HG2 120.0 120.7
CD CG CB HG3 240.0 236.4
CB CG CD CE 133.3 182.5
CB CG CD HD2 13.3 60.0
CB CG CD HD3 253.3 303.0
HG2 CG CB HG3 120.0 115.7
HB2 CB CA C 10.6 300.0
HB2 CB CA HA 251.5 178.4
CA CB HB2 CG 120.0 234.6
CA CB HB2 HB3 240.0 117.9
CG CB HB2 HB3 119.9 243.3
HB2 CB CG CD 31.8 60.1
HB2 CB CG HG2 271.8 299.4
HB2 CB CG HG3 151.8 183.7
HB3 CB CA C 250.5 55.7
HB3 CB CA HA 131.5 294.0
CA CB HB3 CG 240.0 126.1
CA CB HB3 HB2 120.0 242.2
CG CB HB3 HB2 240.1 116.1
HB3 CB CG CD 151.8 305.4
HB3 CB CG HG2 31.8 184.7
HB3 CB CG HG3 271.8 69.0
CD CG CB HB2 31.8 60.1
CD CG CB HB3 151.8 305.4
CB CG CD HG2 240.0 239.9
CB CG CD HG3 120.0 123.3
HG2 CG CD HG3 240.0 243.4
CE CD CG HD2 120.0 122.5
CE CD CG HD3 240.0 239.4
CG CD CE NZ 280.3 298.3
CG CD CE HE2 158.6 59.9
CG CD CE HE3 40.3 177.6
HD2 CD CG HD3 120.0 117.0
HG2 CG CB HB2 271.8 299.4
HG2 CG CB HB3 31.8 184.7
CB CG HG2 CD 120.0 123.3
CB CG HG2 HG3 240.0 242.3
CD CG HG2 HG3 120.0 119.0
HG2 CG CD CE 253.3 302.6
HG2 CG CD HD2 133.3 180.1
HG2 CG CD HD3 13.3 63.1
HG3 CG CB HB2 151.8 183.7
HG3 CG CB HB3 271.8 69.0
CB CG HG3 CD 240.0 234.7
CB CG HG3 HG2 120.0 116.5
CD CG HG3 HG2 240.0 241.9
HG3 CG CD CE 13.3 59.2
HG3 CG CD HD2 253.3 296.7
HG3 CG CD HD3 133.3 179.7
CE CD CG HG2 253.3 302.6
CE CD CG HG3 13.3 59.2
CG CD CE HD2 240.0 237.0
CG CD CE HD3 120.0 121.0
HD2 CD CE HD3 239.9 244.0
NZ CE CD HE2 121.7 238.4
NZ CE CD HE3 240.0 120.8
CD CE NZ CH 266.5 270.1
CD CE NZ HZ 86.5 90.0
HE2 CE CD HE3 118.3 242.4
HD2 CD CG HG2 133.3 180.1
HD2 CD CG HG3 253.3 296.7
CG CD HD2 CE 120.0 124.6
CG CD HD2 HD3 240.0 241.6
CE CD HD2 HD3 120.0 116.9
HD2 CD CE NZ 40.3 61.3
HD2 CD CE HE2 278.5 182.9
HD2 CD CE HE3 160.3 300.6
HD3 CD CG HG2 13.3 63.1
HD3 CD CG HG3 133.3 179.7
CG CD HD3 CE 240.0 236.6
CG CD HD3 HD2 120.0 119.1
CE CD HD3 HD2 240.0 242.5
HD3 CD CE NZ 160.3 177.3
HD3 CD CE HE2 38.6 298.9
HD3 CD CE HE3 280.3 56.5
NZ CE CD HD2 40.3 61.3
NZ CE CD HD3 160.3 177.3
CD CE NZ HE2 238.3 122.1
CD CE NZ HE3 120.0 239.2
HE2 CE NZ HE3 241.7 117.1
CH NZ CE HZ 180.0 180.1
CE NZ CH OI 360.0 359.9
CE NZ CH CI 180.0 179.8
HE2 CE CD HD2 278.5 182.9
HE2 CE CD HD3 38.6 298.9
CD CE HE2 NZ 117.6 236.8
CD CE HE2 HE3 238.8 118.7
NZ CE HE2 HE3 121.2 241.9
HE2 CE NZ CH 28.2 148.0
HE2 CE NZ HZ 208.2 327.9
HE3 CE CD HD2 160.3 300.6
HE3 CE CD HD3 280.3 56.5
CD CE HE3 NZ 243.7 122.5
CD CE HE3 HE2 121.8 240.7
NZ CE HE3 HE2 238.2 118.2
HE3 CE NZ CH 146.5 30.9
HE3 CE NZ HZ 326.5 210.8
CH NZ CE HE2 28.2 148.0
CH NZ CE HE3 146.5 30.9
CE NZ CH HZ 180.0 179.9
OI CH NZ CI 180.0 180.1
NZ CH CI NJ 197.3 180.1
NZ CH CI HI1 77.4 300.0
NZ CH CI HI2 317.3 60.2
HZ NZ CE HE2 208.2 327.9
HZ NZ CE HE3 326.5 210.8
CE NZ HZ CH 180.0 180.1
HZ NZ CH OI 180.0 180.0
HZ NZ CH CI 360.0 359.9
OI CH NZ HZ 180.0 180.0
NZ CH OI CI 180.0 179.9
OI CH CI NJ 17.3 0.0
OI CH CI HI1 257.4 119.9
OI CH CI HI2 137.3 240.1
CI CH NZ HZ 360.0 359.9
NZ CH CI OI 180.0 180.1
NJ CI CH HI1 120.0 240.1
NJ CI CH HI2 240.0 120.0
CH CI NJ CK 187.0 90.0
CH CI NJ HNJ 7.0 270.0
HI1 CI CH HI2 120.1 239.8
CH CI NJ HI1 240.0 120.2
CH CI NJ HI2 120.0 239.6
HI1 CI NJ HI2 240.0 119.5
CK NJ CI HNJ 180.0 180.0
CI NJ CK OL 0.1 0.1
CI NJ CK CL 180.0 180.2
CH CI HI1 NJ 120.0 239.9
CH CI HI1 HI2 240.0 120.5
NJ CI HI1 HI2 120.0 240.6
HI1 CI NJ CK 306.9 329.8
HI1 CI NJ HNJ 126.9 149.8
CH CI HI2 NJ 239.9 120.2
CH CI HI2 HI1 120.0 239.6
NJ CI HI2 HI1 240.0 119.4
HI2 CI NJ CK 66.9 210.3
HI2 CI NJ HNJ 247.0 30.4
CK NJ CI HI1 306.9 329.8
CK NJ CI HI2 66.9 210.3
CI NJ CK HNJ 180.0 180.0
OL CK NJ CL 180.0 179.8
NJ CK CL OM   119.8
NJ CK CL HL 276.3 301.0
HNJ NJ CI HI1 126.9 149.8
HNJ NJ CI HI2 247.0 30.4
CI NJ HNJ CK 180.0 180.0
HNJ NJ CK OL 180.0 180.0
HNJ NJ CK CL 0.0 0.2
OL CK NJ HNJ 180.0 180.0
NJ CK OL CL 180.0 180.2
OL CK CL OM   300.0
OL CK CL HL 96.3 121.1
CL CK NJ HNJ 0.0 0.2
NJ CK CL OL 180.0 179.8
OM CL CK HL   178.8
O C CA HA 131.0 210.0
CA C O OXT   182.7
O C OXT HXT   0.0
OXT C CA HA   32.4
CA C OXT O   177.6
CK CL OM HL   181.3
CK CL HL OM   178.8