PDB Chemical Component CK9

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CK9

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O27	C24	1.378	1.359
O27	H27	0.950	0.967
C24	C23	1.426	1.388
C24	C19	1.420	1.387
C23	C22	1.430	1.381
C23	H23	1.080	1.080
C22	C21	1.426	1.383
C22	H22	1.080	1.080
C21	C20	1.424	1.383
C21	H21	1.080	1.080
C20	C19	1.417	1.381
C20	H20	1.080	1.080
C19	C18	1.492	1.507
C18	N17	1.321	1.466
C18	H181	1.100	1.090
C18	H182	1.100	1.090
N17	C4	1.224	1.383
N17	H17	1.000	0.970
C4	C5	1.401	1.406
C4	N1	1.394	1.329
C5	N9	1.346	1.355
C5	C6	1.445	1.405
N9	C8	1.312	1.301
C8	N7	1.395	1.365
C8	H8	1.079	1.080
C6	N7	1.372	1.372
C6	N3	1.374	1.330
N7	C10	1.511	1.464
C10	C12	1.518	1.531
C10	C11	1.546	1.530
C10	H10	1.101	1.089
C12	H121	1.100	1.090
C12	H122	1.100	1.090
C12	H123	1.100	1.090
C11	H111	1.100	1.091
C11	H112	1.100	1.090
C11	H113	1.101	1.089
N3	C2	1.360	1.323
C2	N1	1.364	1.327
C2	N13	1.292	1.386
N13	C14	1.505	1.465
N13	H13	1.000	0.970
C14	C25	1.577	1.530
C14	C15	1.577	1.530
C14	H14	1.100	1.090
C25	C26	1.552	1.530
C25	H251	1.100	1.090
C25	H252	1.100	1.089
C26	H261	1.100	1.090
C26	H262	1.099	1.091
C26	H263	1.100	1.090
C15	O16	1.431	1.429
C15	H151	1.100	1.090
C15	H152	1.100	1.090
O16	H16	0.950	0.968

Bond Angles for CK9

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C24	O27	H27	109.5	106.8
O27	C24	C23	122.1	120.1
O27	C24	C19	118.8	120.1
C23	C24	C19	119.2	119.8
C24	C23	C22	119.9	120.0
C24	C23	H23	120.0	120.0
C24	C19	C20	121.4	120.0
C24	C19	C18	117.5	120.0
C22	C23	H23	120.1	120.0
C23	C22	C21	120.1	120.0
C23	C22	H22	119.9	119.9
C21	C22	H22	119.9	120.0
C22	C21	C20	119.9	120.1
C22	C21	H21	120.0	119.9
C20	C21	H21	120.1	119.9
C21	C20	C19	119.4	120.0
C21	C20	H20	120.3	120.0
C19	C20	H20	120.3	120.0
C20	C19	C18	121.0	120.0
C19	C18	N17	121.9	109.5
C19	C18	H181	102.6	109.5
C19	C18	H182	105.5	109.5
N17	C18	H181	102.6	109.4
N17	C18	H182	105.6	109.4
C18	N17	C4	130.7	120.0
C18	N17	H17	114.7	120.0
H181	C18	H182	119.8	109.5
C4	N17	H17	114.6	120.0
N17	C4	C5	124.0	120.7
N17	C4	N1	118.7	120.7
C5	C4	N1	117.4	118.6
C4	C5	N9	136.2	134.6
C4	C5	C6	116.5	118.3
C4	N1	C2	125.3	121.1
N9	C5	C6	107.3	107.1
C5	N9	C8	108.7	109.5
C5	C6	N7	106.8	106.0
C5	C6	N3	122.7	119.2
N9	C8	N7	111.8	110.0
N9	C8	H8	124.1	125.0
N7	C8	H8	124.1	125.0
C8	N7	C6	105.3	107.4
C8	N7	C10	128.7	126.3
N7	C6	N3	130.5	134.8
C6	N7	C10	125.9	126.3
C6	N3	C2	119.8	120.6
N7	C10	C12	107.9	109.5
N7	C10	C11	118.5	109.5
N7	C10	H10	104.0	109.5
C12	C10	C11	108.6	109.5
C12	C10	H10	114.8	109.4
C10	C12	H121	109.5	109.5
C10	C12	H122	109.5	109.5
C10	C12	H123	109.5	109.5
C11	C10	H10	103.2	109.5
C10	C11	H111	109.5	109.5
C10	C11	H112	109.4	109.5
C10	C11	H113	109.5	109.5
H121	C12	H122	109.5	109.5
H121	C12	H123	109.5	109.4
H122	C12	H123	109.4	109.5
H111	C11	H112	109.5	109.4
H111	C11	H113	109.5	109.5
H112	C11	H113	109.4	109.5
N3	C2	N1	118.3	122.3
N3	C2	N13	122.0	118.8
N1	C2	N13	119.7	118.8
C2	N13	C14	126.6	120.0
C2	N13	H13	116.7	120.0
C14	N13	H13	116.7	120.1
N13	C14	C25	106.7	109.5
N13	C14	C15	117.3	109.5
N13	C14	H14	107.2	109.5
C25	C14	C15	112.8	109.5
C25	C14	H14	112.2	109.4
C14	C25	C26	120.8	109.5
C14	C25	H251	103.2	109.5
C14	C25	H252	105.9	109.5
C15	C14	H14	100.4	109.5
C14	C15	O16	117.7	109.5
C14	C15	H151	104.9	109.5
C14	C15	H152	106.8	109.5
C26	C25	H251	103.2	109.5
C26	C25	H252	105.8	109.5
C25	C26	H261	109.5	109.5
C25	C26	H262	109.5	109.5
C25	C26	H263	109.5	109.4
H251	C25	H252	118.9	109.4
H261	C26	H262	109.5	109.5
H261	C26	H263	109.4	109.5
H262	C26	H263	109.5	109.5
O16	C15	H151	104.9	109.5
O16	C15	H152	106.8	109.5
C15	O16	H16	109.5	106.8
H151	C15	H152	116.2	109.4

Torsion Angles for CK9

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C23	C24	O27	C19	179.7	180.5
O27	C24	C23	C22	179.5	180.1
O27	C24	C23	H23	359.5	359.7
O27	C24	C19	C20	181.3	180.0
O27	C24	C19	C18	358.3	0.2
H27	O27	C24	C23	285.4	90.0
H27	O27	C24	C19	105.8	269.4
C23	C24	O27	H27	285.4	90.0
O27	C24	C23	C19	180.3	179.5
C23	C24	C19	C20	1.6	359.5
C23	C24	C19	C18	178.6	179.7
C22	C23	C24	H23	180.0	180.3
C24	C23	C22	C21	0.1	359.7
C24	C23	C22	H22	180.0	179.8
C19	C24	O27	H27	105.8	269.4
O27	C24	C19	C23	179.7	180.5
C19	C24	C23	C22	359.1	0.6
C19	C24	C23	H23	179.1	180.2
C21	C20	C19	C24	358.4	0.2
C24	C19	C20	H20	178.4	180.2
C20	C19	C24	C18	183.1	179.8
C24	C19	C18	N17	266.3	79.7
C24	C19	C18	H181	152.5	319.8
C24	C19	C18	H182	26.3	199.7
C22	C23	C24	C19	359.1	0.6
C24	C23	C22	H23	180.0	179.7
C21	C22	C23	H22	180.0	179.9
C23	C22	C21	C20	0.0	0.0
C23	C22	C21	H21	180.0	180.1
H23	C23	C24	C19	179.1	180.2
C24	C23	H23	C22	180.0	180.3
H23	C23	C22	C21	180.1	180.0
H23	C23	C22	H22	0.0	0.1
C21	C22	C23	H23	180.1	180.0
C23	C22	C21	H22	180.0	180.1
C20	C21	C22	H21	180.0	180.0
C22	C21	C20	C19	0.7	360.0
C22	C21	C20	H20	180.7	180.0
H22	C22	C23	H23	0.0	0.1
C23	C22	H22	C21	180.0	179.9
H22	C22	C21	C20	180.0	179.9
H22	C22	C21	H21	0.1	360.0
C24	C19	C20	C21	358.4	0.2
C20	C21	C22	H22	180.0	179.9
C22	C21	C20	H21	180.0	180.0
C19	C20	C21	H20	180.0	180.0
C21	C20	C19	C18	181.6	180.0
H21	C21	C22	H22	0.1	360.0
C22	C21	H21	C20	180.0	180.0
H21	C21	C20	C19	180.7	180.0
H21	C21	C20	H20	0.7	359.9
C24	C19	C20	C18	176.8	180.2
C19	C20	C21	H21	180.7	180.0
C21	C20	C19	H20	180.0	180.0
C20	C19	C18	N17	83.3	260.0
C20	C19	C18	H181	329.5	140.0
C20	C19	C18	H182	203.3	20.0
H20	C20	C21	H21	0.7	359.9
C21	C20	H20	C19	180.0	180.0
H20	C20	C19	C18	1.6	360.0
C24	C19	C18	C20	183.0	179.8
C18	C19	C20	H20	1.6	360.0
N17	C18	C19	H181	113.8	119.9
N17	C18	C19	H182	240.0	240.0
C19	C18	N17	C4	95.1	180.0
C19	C18	N17	H17	275.1	359.9
H181	C18	C19	H182	126.2	120.1
C19	C18	N17	H181	246.2	240.0
C19	C18	N17	H182	120.0	120.0
H181	C18	N17	H182	233.8	240.0
C4	N17	C18	H17	180.0	180.1
C18	N17	C4	C5	173.6	180.0
C18	N17	C4	N1	353.3	360.0
C19	C18	H181	N17	127.2	120.0
C19	C18	H181	H182	243.6	239.9
N17	C18	H181	H182	116.4	119.9
H181	C18	N17	C4	208.9	300.0
H181	C18	N17	H17	28.9	119.9
C19	C18	H182	N17	229.8	240.0
C19	C18	H182	H181	114.9	120.1
N17	C18	H182	H181	245.1	240.1
H182	C18	N17	C4	335.1	60.0
H182	C18	N17	H17	155.1	239.9
C4	N17	C18	H181	208.9	300.0
C4	N17	C18	H182	335.1	60.0
C18	N17	C4	H17	180.0	179.9
C5	C4	N17	N1	180.4	180.0
N17	C4	C5	N9	358.9	359.9
N17	C4	C5	C6	181.1	180.0
N17	C4	N1	C2	177.8	180.0
H17	N17	C18	H181	28.9	119.9
H17	N17	C18	H182	155.1	239.9
C18	N17	H17	C4	180.0	180.1
H17	N17	C4	C5	353.7	0.1
H17	N17	C4	N1	173.3	180.1
C5	C4	N17	H17	353.7	0.1
N17	C4	C5	N1	179.6	180.0
C5	C4	N1	C2	357.4	0.0
N9	C5	C4	C6	177.8	179.9
C4	C5	N9	C8	182.7	180.0
C4	C5	C6	N7	178.0	180.0
C4	C5	C6	N3	0.3	359.7
N1	C4	N17	H17	173.3	180.1
N17	C4	N1	C5	180.4	180.0
N1	C4	C5	N9	179.3	179.9
N1	C4	C5	C6	1.5	0.0
N3	C2	N1	C4	1.7	0.2
C4	N1	C2	N13	182.6	180.0
N9	C5	C4	N1	179.3	179.9
C4	C5	N9	C6	182.1	180.1
N9	C5	C6	N7	359.6	0.1
N9	C5	C6	N3	181.9	179.8
C5	N9	C8	N7	359.3	0.1
C5	N9	C8	H8	179.3	180.0
C6	C5	C4	N1	1.5	0.0
C4	C5	C6	N9	178.4	179.9
C6	C5	N9	C8	0.7	359.9
C8	N7	C6	C5	0.0	360.0
N7	C6	C5	N3	177.7	180.3
C5	C6	N7	C10	181.0	179.9
C5	C6	N3	C2	358.7	0.5
C8	N9	C5	C6	0.7	359.9
N7	C8	N9	H8	180.0	180.1
N9	C8	N7	C6	0.4	360.0
N9	C8	N7	C10	179.4	180.0
C5	C6	N7	C8	0.0	360.0
N9	C8	N7	H8	180.0	179.9
C8	N7	C6	N3	177.4	180.3
C6	N7	C8	C10	181.0	180.0
C8	N7	C10	C12	255.7	299.9
C8	N7	C10	C11	131.9	59.9
C8	N7	C10	H10	18.1	180.0
N9	C8	H8	N7	180.0	180.1
H8	C8	N7	C6	180.4	180.1
H8	C8	N7	C10	359.4	0.1
C5	C6	N7	N3	182.6	179.7
C6	N7	C8	H8	180.4	180.1
C8	N7	C6	C10	179.0	180.0
N7	C6	N3	C2	181.7	180.2
C6	N7	C10	C12	74.5	120.0
C6	N7	C10	C11	310.7	240.0
C6	N7	C10	H10	196.9	0.0
C5	C6	N3	N7	177.0	180.4
N3	C6	N7	C10	358.4	0.3
C6	N3	C2	N1	0.3	359.5
C6	N3	C2	N13	179.3	179.7
C10	N7	C8	H8	359.4	0.1
C8	N7	C10	C6	181.2	179.9
C10	N7	C6	N3	358.4	0.3
C12	C10	N7	C11	123.9	240.0
C12	C10	N7	H10	237.7	120.0
N7	C10	C12	H121	157.5	180.0
N7	C10	C12	H122	37.5	300.0
N7	C10	C12	H123	277.5	60.0
C11	C10	N7	H10	113.8	240.0
N7	C10	C11	H111	182.5	60.0
N7	C10	C11	H112	62.4	180.0
N7	C10	C11	H113	302.5	300.0
N7	C10	C12	C11	230.4	120.0
N7	C10	C12	H10	115.4	240.0
C11	C10	C12	H10	245.1	120.0
C12	C10	C11	H111	59.0	180.0
C12	C10	C11	H112	298.9	300.0
C12	C10	C11	H113	179.0	60.0
H121	C12	C10	H122	120.0	240.0
H121	C12	C10	H123	240.0	119.9
H122	C12	C10	H123	120.0	240.0
N7	C10	C11	C12	123.5	240.0
N7	C10	C11	H10	245.8	120.0
C12	C10	C11	H10	122.3	240.0
C11	C10	C12	H121	287.2	60.0
C11	C10	C12	H122	167.1	180.0
C11	C10	C12	H123	47.2	300.0
H111	C11	C10	H112	120.1	240.1
H111	C11	C10	H113	240.0	120.0
H112	C11	C10	H113	120.0	240.0
N7	C10	H10	C12	242.3	120.0
N7	C10	H10	C11	124.3	240.0
C12	C10	H10	C11	242.0	120.0
H10	C10	C12	H121	42.1	300.0
H10	C10	C12	H122	282.0	60.0
H10	C10	C12	H123	162.1	180.0
H10	C10	C11	H111	296.7	300.0
H10	C10	C11	H112	176.6	60.0
H10	C10	C11	H113	56.7	180.0
H121	C12	C10	C11	287.2	60.0
H121	C12	C10	H10	42.1	300.0
C10	C12	H121	H122	240.0	120.1
C10	C12	H121	H123	120.0	240.1
H122	C12	H121	H123	240.0	120.0
H122	C12	C10	C11	167.1	180.0
H122	C12	C10	H10	282.0	60.0
C10	C12	H122	H121	120.0	240.0
C10	C12	H122	H123	240.0	120.0
H121	C12	H122	H123	120.0	240.0
H123	C12	C10	C11	47.2	300.0
H123	C12	C10	H10	162.1	180.0
C10	C12	H123	H121	240.0	120.0
C10	C12	H123	H122	120.0	240.0
H121	C12	H123	H122	240.0	120.0
H111	C11	C10	H10	296.7	300.0
C10	C11	H111	H112	240.0	120.0
C10	C11	H111	H113	120.0	240.0
H112	C11	H111	H113	240.0	120.0
H112	C11	C10	H10	176.6	60.0
C10	C11	H112	H111	120.0	240.0
C10	C11	H112	H113	240.0	120.0
H111	C11	H112	H113	120.0	240.0
H113	C11	C10	H10	56.7	180.0
C10	C11	H113	H111	240.0	120.0
C10	C11	H113	H112	120.0	240.0
H111	C11	H113	H112	240.0	120.0
C4	N1	C2	N3	1.7	0.2
N1	C2	N3	N13	181.0	179.8
N3	C2	N13	C14	353.5	179.8
N3	C2	N13	H13	173.5	359.7
N3	C2	N1	N13	179.1	180.2
N1	C2	N13	C14	172.5	0.0
N1	C2	N13	H13	352.5	180.0
N3	C2	N13	N1	181.0	179.8
C14	N13	C2	H13	180.0	180.1
C2	N13	C14	C25	92.5	205.0
C2	N13	C14	C15	324.9	85.0
C2	N13	C14	H14	213.0	325.0
C2	N13	C14	H13	180.0	179.9
C25	C14	N13	C15	127.6	120.0
C25	C14	N13	H14	239.5	240.0
N13	C14	C25	C26	78.8	65.0
N13	C14	C25	H251	324.4	305.0
N13	C14	C25	H252	198.7	185.0
C15	C14	N13	H14	111.9	120.0
N13	C14	C15	O16	293.4	65.0
N13	C14	C15	H151	177.2	185.0
N13	C14	C15	H152	53.4	305.0
C2	N13	H13	C14	180.0	180.1
H13	N13	C14	C25	272.5	25.0
H13	N13	C14	C15	144.8	265.1
H13	N13	C14	H14	33.0	145.0
C25	C14	N13	H13	272.5	25.0
N13	C14	C25	C15	229.8	240.0
N13	C14	C25	H14	117.2	120.0
C15	C14	C25	H14	247.4	240.0
C25	C14	C15	O16	168.7	305.0
C25	C14	C15	H151	52.6	65.0
C25	C14	C15	H152	288.7	185.0
C26	C25	C14	H251	114.4	120.0
C26	C25	C14	H252	240.0	240.0
C14	C25	C26	H261	119.5	180.0
C14	C25	C26	H262	359.5	300.0
C14	C25	C26	H263	239.5	60.0
H251	C25	C14	H252	125.6	120.0
C15	C14	N13	H13	144.8	265.1
N13	C14	C15	C25	124.6	120.0
N13	C14	C15	H14	244.3	240.0
C25	C14	C15	H14	119.7	120.0
C15	C14	C25	C26	208.9	185.0
C15	C14	C25	H251	94.6	65.0
C15	C14	C25	H252	328.9	305.0
O16	C15	C14	H151	116.1	240.0
O16	C15	C14	H152	240.0	120.0
C14	C15	O16	H16	229.2	180.0
H151	C15	C14	H152	123.9	240.0
H14	C14	N13	H13	33.0	145.0
N13	C14	H14	C25	243.1	240.0
N13	C14	H14	C15	123.0	120.0
C25	C14	H14	C15	239.9	240.0
H14	C14	C25	C26	321.5	305.0
H14	C14	C25	H251	207.1	185.0
H14	C14	C25	H252	81.5	65.0
H14	C14	C15	O16	49.1	185.0
H14	C14	C15	H151	292.9	305.0
H14	C14	C15	H152	169.1	65.0
C26	C25	C14	C15	208.9	185.0
C26	C25	C14	H14	321.5	305.0
C14	C25	C26	H251	245.6	240.0
C14	C25	C26	H252	120.0	120.1
H251	C25	C26	H252	234.4	240.1
H261	C26	C25	H262	120.0	240.0
H261	C26	C25	H263	240.0	120.0
H262	C26	C25	H263	120.0	240.1
H251	C25	C14	C15	94.6	65.0
H251	C25	C14	H14	207.1	185.0
C14	C25	H251	C26	126.5	120.0
C14	C25	H251	H252	243.2	240.0
C26	C25	H251	H252	116.7	120.0
H251	C25	C26	H261	233.9	300.0
H251	C25	C26	H262	113.9	60.0
H251	C25	C26	H263	353.9	180.0
H252	C25	C14	C15	328.9	305.0
H252	C25	C14	H14	81.5	65.0
C14	C25	H252	C26	230.7	240.0
C14	C25	H252	H251	115.3	120.0
C26	C25	H252	H251	244.7	240.0
H252	C25	C26	H261	359.5	60.0
H252	C25	C26	H262	239.5	180.0
H252	C25	C26	H263	119.5	299.9
H261	C26	C25	H251	233.9	300.0
H261	C26	C25	H252	359.5	60.0
C25	C26	H261	H262	240.0	120.0
C25	C26	H261	H263	120.0	240.0
H262	C26	H261	H263	240.0	120.0
H262	C26	C25	H251	113.9	60.0
H262	C26	C25	H252	239.5	180.0
C25	C26	H262	H261	120.0	240.0
C25	C26	H262	H263	240.0	119.9
H261	C26	H262	H263	120.0	239.9
H263	C26	C25	H251	353.9	180.0
H263	C26	C25	H252	119.5	299.9
C25	C26	H263	H261	240.0	120.0
C25	C26	H263	H262	120.0	240.1
H261	C26	H263	H262	240.0	120.1
O16	C15	C14	H14	49.1	185.0
C14	C15	O16	H151	243.9	120.0
C14	C15	O16	H152	120.0	240.0
H151	C15	O16	H152	236.1	120.0
H151	C15	C14	H14	292.9	305.0
C14	C15	H151	O16	124.7	240.0
C14	C15	H151	H152	242.3	120.0
O16	C15	H151	H152	117.7	240.0
H151	C15	O16	H16	345.4	60.0
H152	C15	C14	H14	169.1	65.0
C14	C15	H152	O16	233.2	120.0
C14	C15	H152	H151	116.6	240.0
O16	C15	H152	H151	243.4	120.0
H152	C15	O16	H16	109.2	300.0
H16	O16	C15	H151	345.4	60.0
H16	O16	C15	H152	109.2	300.0