PDB Chemical Component CK2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CK2
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C7A |
C3A |
1.528 |
1.506 |
| C7A |
H7A1 |
1.115 |
1.089 |
| C7A |
H7A2 |
1.114 |
1.090 |
| C7A |
H7A3 |
1.115 |
1.089 |
| C3A |
S4A |
1.658 |
1.737 |
| C3A |
N2A |
1.238 |
1.315 |
| S4A |
C5A |
1.741 |
1.787 |
| N2A |
C1A |
1.331 |
1.311 |
| C1A |
C6A |
1.411 |
1.507 |
| C1A |
C5A |
1.315 |
1.372 |
| C6A |
H6A1 |
1.115 |
1.089 |
| C6A |
H6A2 |
1.115 |
1.091 |
| C6A |
H6A3 |
1.116 |
1.089 |
| C5A |
C4 |
1.465 |
1.475 |
| C4 |
N3 |
1.330 |
1.333 |
| C4 |
C5 |
1.394 |
1.401 |
| N3 |
C2 |
1.261 |
1.323 |
| C5 |
C6 |
1.374 |
1.382 |
| C5 |
H5 |
1.103 |
1.080 |
| C6 |
N1 |
1.357 |
1.325 |
| C6 |
H6 |
1.103 |
1.080 |
| N1 |
C2 |
1.311 |
1.324 |
| C2 |
N7 |
1.298 |
1.385 |
| N7 |
HN71 |
1.020 |
0.970 |
| N7 |
HN72 |
1.020 |
0.970 |
Bond Angles for CK2
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C3A |
C7A |
H7A1 |
129.0 |
109.5 |
| C3A |
C7A |
H7A2 |
105.4 |
109.5 |
| C3A |
C7A |
H7A3 |
105.4 |
109.5 |
| C7A |
C3A |
S4A |
129.0 |
128.8 |
| C7A |
C3A |
N2A |
120.9 |
128.9 |
| H7A1 |
C7A |
H7A2 |
105.4 |
109.4 |
| H7A1 |
C7A |
H7A3 |
105.4 |
109.4 |
| H7A2 |
C7A |
H7A3 |
103.9 |
109.4 |
| S4A |
C3A |
N2A |
110.1 |
102.3 |
| C3A |
S4A |
C5A |
92.2 |
97.4 |
| C3A |
N2A |
C1A |
117.4 |
121.7 |
| S4A |
C5A |
C1A |
105.6 |
100.5 |
| S4A |
C5A |
C4 |
124.8 |
129.7 |
| N2A |
C1A |
C6A |
110.9 |
121.0 |
| N2A |
C1A |
C5A |
114.6 |
118.1 |
| C6A |
C1A |
C5A |
134.4 |
121.0 |
| C1A |
C6A |
H6A1 |
110.9 |
109.5 |
| C1A |
C6A |
H6A2 |
111.7 |
109.5 |
| C1A |
C6A |
H6A3 |
111.7 |
109.5 |
| C1A |
C5A |
C4 |
129.6 |
129.8 |
| H6A1 |
C6A |
H6A2 |
111.7 |
109.4 |
| H6A1 |
C6A |
H6A3 |
111.6 |
109.5 |
| H6A2 |
C6A |
H6A3 |
98.7 |
109.4 |
| C5A |
C4 |
N3 |
120.5 |
120.5 |
| C5A |
C4 |
C5 |
118.4 |
120.5 |
| N3 |
C4 |
C5 |
121.1 |
118.9 |
| C4 |
N3 |
C2 |
117.7 |
120.5 |
| C4 |
C5 |
C6 |
115.7 |
118.4 |
| C4 |
C5 |
H5 |
122.8 |
120.8 |
| N3 |
C2 |
N1 |
128.4 |
121.8 |
| N3 |
C2 |
N7 |
114.4 |
119.1 |
| C6 |
C5 |
H5 |
121.5 |
120.8 |
| C5 |
C6 |
N1 |
122.0 |
119.3 |
| C5 |
C6 |
H6 |
119.7 |
120.4 |
| N1 |
C6 |
H6 |
118.4 |
120.3 |
| C6 |
N1 |
C2 |
115.1 |
121.0 |
| N1 |
C2 |
N7 |
117.2 |
119.1 |
| C2 |
N7 |
HN71 |
114.4 |
120.0 |
| C2 |
N7 |
HN72 |
110.4 |
120.1 |
| HN71 |
N7 |
HN72 |
110.3 |
120.0 |
Torsion Angles for CK2
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H7A1 |
C7A |
C3A |
H7A2 |
234.8 |
240.0 |
| H7A1 |
C7A |
C3A |
H7A3 |
125.2 |
120.0 |
| H7A2 |
C7A |
C3A |
H7A3 |
250.5 |
240.0 |
| S4A |
C3A |
C7A |
N2A |
179.0 |
180.3 |
| C7A |
C3A |
S4A |
C5A |
179.7 |
179.9 |
| C7A |
C3A |
N2A |
C1A |
179.7 |
179.9 |
| C3A |
C7A |
H7A1 |
H7A2 |
125.2 |
120.1 |
| C3A |
C7A |
H7A1 |
H7A3 |
234.8 |
240.0 |
| H7A1 |
C7A |
C3A |
S4A |
180.0 |
180.0 |
| H7A1 |
C7A |
C3A |
N2A |
1.0 |
359.7 |
| H7A2 |
C7A |
H7A1 |
H7A3 |
109.5 |
119.9 |
| C3A |
C7A |
H7A2 |
H7A1 |
221.2 |
239.9 |
| C3A |
C7A |
H7A2 |
H7A3 |
110.6 |
120.0 |
| H7A2 |
C7A |
C3A |
S4A |
305.2 |
300.0 |
| H7A2 |
C7A |
C3A |
N2A |
126.2 |
119.7 |
| H7A1 |
C7A |
H7A2 |
H7A3 |
249.4 |
240.1 |
| C3A |
C7A |
H7A3 |
H7A1 |
138.8 |
120.0 |
| C3A |
C7A |
H7A3 |
H7A2 |
249.4 |
240.0 |
| H7A3 |
C7A |
C3A |
S4A |
54.8 |
60.0 |
| H7A3 |
C7A |
C3A |
N2A |
235.8 |
239.7 |
| H7A1 |
C7A |
H7A3 |
H7A2 |
110.6 |
119.9 |
| S4A |
C3A |
C7A |
H7A1 |
180.0 |
180.0 |
| S4A |
C3A |
C7A |
H7A2 |
305.2 |
300.0 |
| S4A |
C3A |
C7A |
H7A3 |
54.8 |
60.0 |
| C7A |
C3A |
S4A |
N2A |
180.9 |
179.7 |
| S4A |
C3A |
N2A |
C1A |
0.5 |
359.6 |
| C3A |
S4A |
C5A |
C1A |
1.7 |
0.0 |
| C3A |
S4A |
C5A |
C4 |
181.1 |
180.0 |
| N2A |
C3A |
C7A |
H7A1 |
1.0 |
359.7 |
| N2A |
C3A |
C7A |
H7A2 |
126.2 |
119.7 |
| N2A |
C3A |
C7A |
H7A3 |
235.8 |
239.7 |
| C7A |
C3A |
N2A |
S4A |
179.2 |
180.3 |
| N2A |
C3A |
S4A |
C5A |
358.7 |
0.2 |
| C3A |
N2A |
C1A |
C6A |
179.2 |
180.2 |
| C3A |
N2A |
C1A |
C5A |
0.9 |
0.5 |
| C5A |
S4A |
C3A |
N2A |
358.7 |
0.2 |
| N2A |
C1A |
C5A |
S4A |
358.3 |
359.8 |
| C6A |
C1A |
C5A |
S4A |
180.6 |
180.0 |
| C1A |
C5A |
S4A |
C4 |
180.6 |
180.0 |
| S4A |
C5A |
C4 |
N3 |
140.8 |
179.8 |
| S4A |
C5A |
C4 |
C5 |
322.6 |
360.0 |
| S4A |
C5A |
C1A |
N2A |
358.3 |
359.8 |
| C6A |
C1A |
N2A |
C5A |
178.2 |
179.8 |
| N2A |
C1A |
C6A |
H6A1 |
180.0 |
270.3 |
| N2A |
C1A |
C6A |
H6A2 |
305.3 |
30.3 |
| N2A |
C1A |
C6A |
H6A3 |
54.8 |
150.2 |
| N2A |
C1A |
C5A |
C4 |
178.9 |
179.8 |
| S4A |
C5A |
C1A |
C6A |
180.6 |
180.0 |
| N2A |
C1A |
C6A |
C5A |
182.2 |
180.3 |
| C6A |
C1A |
C5A |
C4 |
1.2 |
0.1 |
| H6A1 |
C6A |
C1A |
H6A2 |
234.7 |
240.0 |
| H6A1 |
C6A |
C1A |
H6A3 |
125.2 |
120.1 |
| H6A2 |
C6A |
C1A |
H6A3 |
250.5 |
240.1 |
| S4A |
C5A |
C1A |
C4 |
179.4 |
180.0 |
| N2A |
C1A |
C5A |
C6A |
177.7 |
179.8 |
| C5A |
C1A |
C6A |
H6A1 |
357.7 |
90.0 |
| C5A |
C1A |
C6A |
H6A2 |
123.0 |
210.0 |
| C5A |
C1A |
C6A |
H6A3 |
232.5 |
329.9 |
| C1A |
C5A |
C4 |
N3 |
320.1 |
359.7 |
| C1A |
C5A |
C4 |
C5 |
141.9 |
179.9 |
| H6A1 |
C6A |
C1A |
C5A |
357.7 |
90.0 |
| C1A |
C6A |
H6A1 |
H6A2 |
125.3 |
120.0 |
| C1A |
C6A |
H6A1 |
H6A3 |
234.8 |
239.9 |
| H6A2 |
C6A |
H6A1 |
H6A3 |
109.5 |
119.9 |
| H6A2 |
C6A |
C1A |
C5A |
123.0 |
210.0 |
| C1A |
C6A |
H6A2 |
H6A1 |
235.1 |
239.9 |
| C1A |
C6A |
H6A2 |
H6A3 |
117.6 |
120.0 |
| H6A1 |
C6A |
H6A2 |
H6A3 |
242.5 |
240.0 |
| H6A3 |
C6A |
C1A |
C5A |
232.5 |
329.9 |
| C1A |
C6A |
H6A3 |
H6A1 |
124.8 |
120.1 |
| C1A |
C6A |
H6A3 |
H6A2 |
242.4 |
240.0 |
| H6A1 |
C6A |
H6A3 |
H6A2 |
117.6 |
119.9 |
| S4A |
C5A |
C4 |
C1A |
180.7 |
180.1 |
| N3 |
C4 |
C5A |
C5 |
178.2 |
179.8 |
| C5A |
C4 |
N3 |
C2 |
179.4 |
179.8 |
| C5A |
C4 |
C5 |
C6 |
180.0 |
180.0 |
| C5A |
C4 |
C5 |
H5 |
360.0 |
-0.0 |
| C5A |
C4 |
N3 |
C5 |
181.8 |
180.2 |
| N3 |
C4 |
C5 |
C6 |
1.8 |
0.2 |
| N3 |
C4 |
C5 |
H5 |
181.8 |
180.2 |
| C4 |
N3 |
C2 |
N1 |
2.0 |
0.4 |
| C4 |
N3 |
C2 |
N7 |
184.5 |
180.3 |
| C5A |
C4 |
C5 |
N3 |
178.2 |
179.8 |
| C5 |
C4 |
N3 |
C2 |
357.6 |
359.6 |
| C6 |
C5 |
C4 |
H5 |
180.1 |
180.0 |
| C4 |
C5 |
C6 |
N1 |
359.3 |
360.0 |
| C4 |
C5 |
C6 |
H6 |
179.3 |
180.0 |
| C2 |
N3 |
C4 |
C5 |
357.6 |
359.6 |
| C6 |
N1 |
C2 |
N3 |
359.1 |
359.8 |
| N1 |
C2 |
N3 |
N7 |
177.5 |
180.2 |
| N3 |
C2 |
N7 |
HN71 |
180.0 |
180.3 |
| N3 |
C2 |
N7 |
HN72 |
54.8 |
0.2 |
| C4 |
C5 |
C6 |
H5 |
179.9 |
180.0 |
| N1 |
C6 |
C5 |
H6 |
180.1 |
180.0 |
| C5 |
C6 |
N1 |
C2 |
0.2 |
-0.0 |
| C4 |
C5 |
H5 |
C6 |
180.1 |
180.0 |
| H5 |
C5 |
C6 |
N1 |
179.4 |
180.0 |
| H5 |
C5 |
C6 |
H6 |
359.3 |
-0.0 |
| N3 |
C2 |
N1 |
C6 |
359.1 |
359.8 |
| N1 |
C6 |
C5 |
H5 |
179.4 |
180.0 |
| C5 |
C6 |
N1 |
H6 |
179.9 |
180.0 |
| C6 |
N1 |
C2 |
N7 |
176.6 |
180.0 |
| H6 |
C6 |
C5 |
H5 |
359.3 |
-0.0 |
| C5 |
C6 |
H6 |
N1 |
180.1 |
180.0 |
| H6 |
C6 |
N1 |
C2 |
180.2 |
180.0 |
| N3 |
C2 |
N1 |
N7 |
182.5 |
179.8 |
| C2 |
N1 |
C6 |
H6 |
180.2 |
180.0 |
| N1 |
C2 |
N7 |
HN71 |
2.2 |
0.1 |
| N1 |
C2 |
N7 |
HN72 |
237.0 |
180.0 |
| N3 |
C2 |
N7 |
N1 |
177.8 |
180.2 |
| HN71 |
N7 |
C2 |
HN72 |
125.2 |
180.1 |
| C2 |
N7 |
HN71 |
HN72 |
234.8 |
179.9 |
| C2 |
N7 |
HN72 |
HN71 |
127.5 |
180.1 |