PDB Chemical Component CJQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CJQ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C 1.341 1.313
N1 C5 1.330 1.340
C N 1.340 1.322
S C5 1.740 1.754
S C4 1.738 1.763
C5 C2 1.392 1.391
N C1 1.326 1.323
C2 C1 1.420 1.417
C2 C3 1.428 1.466
C1 O1 1.352 1.355
C4 C3 1.355 1.326
C4 C6 1.476 1.526
C3 C8 1.512 1.528
C6 C7 1.516 1.542
O1 C11 1.457 1.429
C11 C16 1.515 1.530
C11 C12 1.507 1.530
C16 C15 1.539 1.529
C15 C14 1.539 1.531
C8 C7 1.567 1.541
C8 C9 1.530 1.530
C17 C18 1.518 1.532
C17 N3 1.472 1.471
C12 C13 1.518 1.530
C9 C10 1.511 1.508
C18 O2 1.440 1.430
C13 C14 1.526 1.530
C14 N3 1.474 1.469
N3 C20 1.465 1.470
O2 C19 1.439 1.430
C10 N2 1.322 1.347
C10 O 1.231 1.213
C20 C19 1.510 1.531
C7 H1 1.100 1.090
C7 H2 1.100 1.090
C8 H3 1.100 1.090
C9 H4 1.100 1.090
C9 H5 1.100 1.090
C11 H6 1.100 1.090
C12 H7 1.100 1.090
C12 H8 1.101 1.090
C13 H9 1.100 1.091
C13 H10 1.100 1.089
C14 H11 1.100 1.090
C15 H12 1.099 1.090
C15 H13 1.100 1.091
C16 H14 1.100 1.090
C16 H15 1.100 1.090
C19 H16 1.100 1.090
C19 H17 1.100 1.091
C20 H18 1.100 1.090
C20 H19 1.099 1.089
N2 H20 1.000 0.971
N2 H21 1.000 0.969
C6 H22 1.100 1.089
C6 H23 1.100 1.090
C H24 1.080 1.080
C18 H26 1.100 1.090
C18 H27 1.100 1.090
C17 H28 1.100 1.090
C17 H29 1.100 1.090

Bond Angles for CJQ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N1 C N 128.5 122.3
N1 C H24 115.8 118.9
N C H24 115.8 118.8
N C1 O1 121.1 120.6
C2 C1 O1 115.4 120.6
C2 C3 C8 139.3 135.9
C1 O1 C11 119.6 117.0
C4 C6 H22 111.5 110.3
C4 C6 H23 111.4 110.4
C3 C8 C7 101.9 104.9
C3 C8 C9 106.8 110.4
C3 C8 H3 110.4 110.4
C6 C7 H1 110.0 110.9
C6 C7 H2 110.0 111.1
O1 C11 H6 111.1 109.4
C12 C11 C16 110.7 109.5
C11 C16 C15 111.1 109.5
C16 C11 H6 110.2 109.5
C11 C16 H14 109.1 109.5
C11 C16 H15 109.1 109.4
C11 C12 C13 110.0 109.4
C12 C11 H6 110.3 109.5
C11 C12 H7 109.3 109.5
C11 C12 H8 109.3 109.4
C16 C15 H12 108.7 109.5
C16 C15 H13 108.7 109.5
C15 C14 N3 115.8 109.5
C15 C14 H11 105.2 109.4
C8 C7 H1 110.0 111.0
C8 C7 H2 110.0 111.1
C8 C9 C10 113.2 109.5
C9 C8 H3 110.2 110.4
C8 C9 H4 108.5 109.5
C8 C9 H5 108.5 109.5
C17 C18 H26 108.8 109.5
C17 C18 H27 108.7 109.6
C12 C13 C14 112.6 109.5
C13 C12 H7 109.3 109.5
C13 C12 H8 109.3 109.5
C12 C13 H9 108.7 109.4
C12 C13 H10 108.7 109.5
C9 C10 N2 116.1 120.0
C9 C10 O 120.6 120.0
C10 C9 H4 108.5 109.4
C10 C9 H5 108.5 109.4
C13 C14 N3 110.5 109.5
C14 C13 H9 108.7 109.5
C14 C13 H10 108.7 109.5
C13 C14 H11 105.3 109.4
C14 N3 C20 119.5 111.0
N3 C14 H11 105.9 109.5
N3 C20 H18 109.6 109.5
N3 C20 H19 109.6 109.5
O2 C19 H16 108.9 109.5
O2 C19 H17 108.9 109.4
O C10 N2 123.3 120.0
C10 N2 H20 120.0 120.0
C10 N2 H21 120.0 120.0
C20 C19 H16 108.9 109.5
C20 C19 H17 108.9 109.5
H1 C7 H2 109.5 110.9
H4 C9 H5 109.5 109.5
H7 C12 H8 109.5 109.4
H9 C13 H10 109.5 109.4
H12 C15 H13 109.5 109.5
H14 C16 H15 109.4 109.5
H16 C19 H17 109.5 109.5
H18 C20 H19 109.4 109.6
H20 N2 H21 120.0 120.0
H22 C6 H23 109.4 110.3
H26 C18 H27 109.5 109.5
H28 C17 H29 109.4 109.6

Torsion Angles for CJQ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N C N1 H24 180.0 179.7
N1 C N H24 180.0 180.3
C N C1 O1 192.6 179.7
S C4 C6 H22 291.5 43.6
S C4 C6 H23 54.2 281.3
C5 C2 C1 O1 166.2 180.0
C2 C1 N O1 169.7 179.7
N C1 O1 C11 349.6 359.7
N C1 C2 O1 189.8 180.3
C2 C1 O1 C11 179.2 180.0
C3 C2 C1 O1 350.5 359.9
C2 C3 C8 C7 184.1 197.5
C2 C3 C8 C9 60.4 78.7
C2 C3 C8 H3 300.6 316.3
C1 O1 C11 H6 325.1 30.0
C4 C3 C8 H3 126.3 136.4
C4 C6 C7 H1 141.6 268.5
C4 C6 C7 H2 262.2 144.7
H22 C6 C4 H23 237.4 122.2
C3 C8 C7 H1 220.4 91.4
C3 C8 C7 H2 99.7 215.3
C3 C8 C9 C10 175.4 185.0
C9 C8 C3 H3 119.8 122.3
C3 C8 C9 H4 296.0 305.0
C3 C8 C9 H5 54.9 65.0
C8 C7 C6 H1 240.3 118.0
C8 C7 C6 H2 119.7 241.8
H1 C7 C6 H2 239.3 123.8
C16 C11 O1 H6 122.9 120.0
O1 C11 C16 H14 293.4 300.0
O1 C11 C16 H15 52.9 60.0
C12 C11 O1 H6 241.6 240.0
O1 C11 C12 H7 300.1 300.0
O1 C11 C12 H8 59.9 60.0
C1 O1 C11 C16 88.0 150.0
O1 C11 C16 H6 236.6 240.1
C16 C11 C12 C13 298.9 300.0
C12 C11 C16 H6 122.3 120.0
C16 C11 C12 H7 58.9 60.0
C16 C11 C12 H8 178.8 180.0
C11 C16 C15 H12 69.4 180.1
C11 C16 C15 H13 188.5 60.0
H14 C16 C11 H15 240.5 240.0
C1 O1 C11 C12 206.8 270.0
O1 C11 C12 H6 118.9 120.0
C12 C11 C16 C15 58.9 60.0
C16 C11 C12 H6 237.7 240.0
C12 C11 C16 H14 179.2 180.0
C12 C11 C16 H15 298.6 300.0
C11 C12 C13 C14 56.1 60.0
C13 C12 C11 H7 239.9 240.0
C13 C12 C11 H8 120.1 120.0
C11 C12 C13 H9 176.6 180.1
C11 C12 C13 H10 295.7 300.0
H7 C12 C11 H8 240.2 240.0
C15 C16 C11 H6 296.6 300.0
C11 C16 C15 H14 120.2 120.0
C11 C16 C15 H15 239.7 240.0
C16 C15 C14 N3 175.4 180.0
C16 C15 C14 H11 291.9 300.0
H12 C15 C16 H13 240.9 120.1
C11 C16 C15 C14 308.9 300.0
C13 C14 C15 N3 231.0 239.9
C15 C14 C13 H9 190.4 180.0
C15 C14 C13 H10 71.3 60.1
C13 C14 C15 H11 114.4 119.9
C15 C14 N3 C20 118.6 70.0
N3 C14 C15 H11 243.5 240.0
C3 C8 C7 C9 243.7 241.1
C3 C8 C7 H3 117.0 118.9
C6 C7 C8 H1 119.7 242.0
C6 C7 C8 H2 240.3 118.2
H1 C7 C8 H2 120.7 236.1
C3 C8 C9 C7 113.6 115.5
C3 C8 C9 H3 240.1 237.7
C9 C8 C7 H1 336.6 210.3
C9 C8 C7 H2 216.0 334.1
C8 C9 C10 N2 251.2 180.0
C8 C9 C10 O 71.5 360.0
C10 C9 C8 H4 239.4 240.0
C10 C9 C8 H5 120.6 120.0
H4 C9 C8 H5 241.1 239.9
H26 C18 C17 H27 240.8 120.1
C17 N3 C14 H11 223.4 186.3
C17 N3 C20 H18 63.6 181.5
C17 N3 C20 H19 183.7 61.3
C13 C12 C11 C16 298.9 300.0
C13 C12 C11 H6 61.1 60.0
C11 C12 C13 H7 120.1 120.0
C11 C12 C13 H8 239.9 240.0
C12 C13 C14 N3 179.2 180.0
C14 C13 C12 H9 239.5 240.0
C14 C13 C12 H10 120.5 120.1
C12 C13 C14 H11 65.3 59.9
H7 C12 C13 H8 119.8 120.0
H9 C13 C12 H10 240.9 240.1
C10 C9 C8 H3 295.4 307.3
C8 C9 C10 H4 120.6 120.0
C8 C9 C10 H5 239.4 240.0
O C10 C9 N2 180.3 180.0
C9 C10 N2 H20 180.2 359.9
C9 C10 N2 H21 0.3 180.0
H4 C9 C10 H5 118.9 120.0
C18 O2 C19 H16 63.2 181.4
C18 O2 C19 H17 182.4 61.4
C15 C14 C13 N3 131.7 120.1
C15 C14 C13 H11 245.6 240.1
C14 C13 C12 H7 296.0 300.0
C14 C13 C12 H8 176.2 180.0
C12 C13 C14 H9 120.5 120.0
C12 C13 C14 H10 239.6 239.9
C13 C14 N3 C20 248.8 190.0
N3 C14 C13 H11 113.9 120.0
H9 C13 C14 H10 119.1 119.9
C15 C14 N3 H11 116.1 120.0
N3 C14 C13 H9 58.7 60.0
N3 C14 C13 H10 299.6 300.1
C13 C14 N3 H11 246.4 240.0
C14 N3 C20 H18 283.8 57.7
C14 N3 C20 H19 43.9 297.6
C20 N3 C14 H11 2.4 310.0
N3 C20 C19 H16 296.3 176.8
N3 C20 C19 H17 177.0 296.9
H18 C20 N3 H19 239.9 120.2
C20 C19 O2 H16 239.6 120.0
C20 C19 O2 H17 120.4 240.0
H16 C19 O2 H17 240.7 120.0
C9 C10 N2 O 180.3 180.0
N2 C10 C9 H4 130.6 60.0
N2 C10 C9 H5 11.8 300.0
H20 N2 C10 H21 180.0 179.9
C9 C10 O N2 179.7 180.0
O C10 C9 H4 310.9 240.0
O C10 C9 H5 192.0 120.0
O C10 N2 H20 360.0 180.0
O C10 N2 H21 180.0 0.0
C14 N3 C20 C19 163.9 177.6
O2 C19 C20 H16 120.4 240.0
O2 C19 C20 H17 239.7 119.9
H16 C19 C20 H17 119.3 239.9
C6 C7 H1 H2 121.0 236.1
C8 C7 H1 H2 239.0 124.0
C6 C7 H2 H1 239.0 123.9
C8 C7 H2 H1 121.0 236.1
C3 C8 H3 C7 248.4 244.5
C3 C8 H3 C9 117.7 122.3
H3 C8 C7 H1 103.4 332.5
H3 C8 C7 H2 342.7 96.4
H3 C8 C9 C10 295.4 307.3
H3 C8 C9 H4 55.9 67.3
H3 C8 C9 H5 174.8 187.4
C8 C9 H4 C10 236.6 240.0
H4 C9 C8 H3 55.9 67.3
C8 C9 H4 H5 118.3 120.1
H4 C9 C10 N2 130.6 60.0
H4 C9 C10 O 310.9 240.0
C10 C9 H4 H5 241.7 240.0
C8 C9 H5 C10 123.4 120.0
H5 C9 C8 H3 174.8 187.4
C8 C9 H5 H4 241.7 240.0
H5 C9 C10 N2 11.8 300.0
H5 C9 C10 O 192.0 120.0
C10 C9 H5 H4 118.3 120.0
C12 C11 H6 C16 237.5 240.0
H6 C11 C16 C15 296.6 300.0
H6 C11 C16 H14 56.8 60.0
H6 C11 C16 H15 176.3 180.0
H6 C11 C12 C13 61.1 60.0
H6 C11 C12 H7 181.2 180.0
H6 C11 C12 H8 301.0 300.0
H7 C12 C11 C16 58.9 60.0
C11 C12 H7 C13 239.5 240.0
H7 C12 C11 H6 181.2 180.0
C11 C12 H7 H8 119.8 120.0
H7 C12 C13 C14 296.0 300.0
C13 C12 H7 H8 240.2 239.9
H7 C12 C13 H9 56.5 60.0
H7 C12 C13 H10 175.6 180.0
H8 C12 C11 C16 178.8 180.0
C11 C12 H8 C13 120.5 120.0
H8 C12 C11 H6 301.0 300.0
C11 C12 H8 H7 240.2 240.0
H8 C12 C13 C14 176.2 180.0
C13 C12 H8 H7 119.7 120.1
H8 C12 C13 H9 296.7 300.0
H8 C12 C13 H10 55.7 59.9
C12 C13 H9 C14 237.1 240.0
H9 C13 C12 H7 56.5 60.0
H9 C13 C12 H8 296.7 300.0
C12 C13 H9 H10 118.6 120.0
H9 C13 C14 N3 58.7 60.0
C14 C13 H9 H10 241.4 240.0
H9 C13 C14 H11 304.8 299.9
C12 C13 H10 C14 122.8 120.1
H10 C13 C12 H7 175.6 180.0
H10 C13 C12 H8 55.7 59.9
C12 C13 H10 H9 241.4 240.1
H10 C13 C14 N3 299.6 300.1
C14 C13 H10 H9 118.6 120.0
H10 C13 C14 H11 185.7 180.0
C15 C14 H11 N3 236.9 240.0
C13 C14 H11 N3 117.1 120.1
H11 C14 C13 H9 304.8 299.9
H11 C14 C13 H10 185.7 180.0
H11 C14 N3 C20 2.4 310.0
C16 C15 H12 H13 118.6 239.9
H12 C15 C14 N3 54.9 300.1
H12 C15 C14 H11 171.5 60.0
C16 C15 H13 H12 241.4 120.1
H13 C15 C14 N3 295.8 60.0
H13 C15 C14 H11 52.3 180.0
C11 C16 H14 C15 238.5 240.0
H14 C16 C11 H6 56.8 60.0
C11 C16 H14 H15 119.2 120.0
H14 C16 C15 H12 309.1 60.1
H14 C16 C15 H13 68.2 300.0
C11 C16 H15 C15 121.5 120.0
H15 C16 C11 H6 176.3 180.0
C11 C16 H15 H14 240.8 240.0
H15 C16 C15 H12 189.6 300.0
H15 C16 C15 H13 308.7 180.0
O2 C19 H16 H17 118.9 240.0
C20 C19 H16 H17 241.1 120.1
O2 C19 H17 H16 241.1 120.0
C20 C19 H17 H16 118.9 239.9
N3 C20 H18 H19 120.2 239.9
H18 C20 C19 H16 176.4 296.7
H18 C20 C19 H17 57.1 56.8
N3 C20 H19 H18 239.8 120.1
H19 C20 C19 H16 56.2 56.8
H19 C20 C19 H17 297.0 176.9
C10 N2 H20 H21 180.0 180.1
C10 N2 H21 H20 180.0 179.9
C4 C6 H22 H23 123.8 237.7
H22 C6 C7 H1 22.9 27.4
H22 C6 C7 H2 143.5 263.5
C4 C6 H23 H22 236.2 122.2
H23 C6 C7 H1 260.3 149.6
H23 C6 C7 H2 20.9 25.8
N1 C H24 N 180.0 179.7
C17 C18 H26 H27 118.7 239.9
C17 C18 H27 H26 241.3 120.1
H28 C17 C18 H26 186.7 63.3
H28 C17 C18 H27 305.8 303.2
H29 C17 C18 H26 306.7 303.1
H29 C17 C18 H27 65.9 183.0