PDB Chemical Component CJO

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CJO

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CA1	N1	1.493	1.469
N1	H	1.000	1.009
N1	H2	1.000	1.009
C1	CA1	1.509	1.530
CA1	CB1	1.519	1.530
CA1	HA1	1.100	1.090
CB1	OG1	1.414	1.429
CB1	CG1	1.454	1.530
CB1	HB1	1.100	1.089
CG1	HG1	1.100	1.089
CG1	HG1A	1.100	1.090
CG1	HG1B	1.100	1.090
OG1	HOG1	0.950	0.967
N3	C1	1.314	1.469
C1	N2	1.360	1.481
CA2	N2	1.389	1.483
C2	N3	1.368	1.348
CA3	N3	1.428	1.465
O2	C2	1.204	1.213
C2	CA2	1.321	1.514
CB2	CA2	1.392	1.530
CA2	HA2	1.100	1.090
CA3	C3	1.556	1.507
CA3	HA31	1.100	1.090
CA3	HA32	1.099	1.090
O3	C3	1.284	1.208
C3	OXT	1.283	1.342
OXT	HXT	0.950	0.968
CB2	CG2	1.366	1.507
CB2	HB2	1.100	1.091
CB2	HB2A	1.100	1.091
CD2	CG2	1.395	1.382
CG2	CD1	1.381	1.382
CD1	CE1	1.404	1.382
CD1	HD1	1.080	1.080
CD2	CE2	1.385	1.382
CD2	HD2	1.080	1.080
CZ	CE1	1.383	1.387
CE1	HE1	1.080	1.080
CE2	CZ	1.380	1.388
CE2	HE2	1.080	1.080
CZ	OH	1.371	1.359
OH	HOH	0.950	0.967
C1	HC1	1.100	1.090
N2	HN2	1.000	1.009

Bond Angles for CJO

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CA1	N1	H	109.5	111.0
CA1	N1	H2	109.5	111.0
H	N1	H2	109.5	111.0
C1	CA1	HA1	110.4	109.5
CB1	CA1	HA1	102.3	109.4
CA1	CB1	OG1	109.4	109.5
CA1	CB1	CG1	112.2	109.5
CA1	CB1	HB1	110.7	109.5
CG1	CB1	OG1	117.1	109.4
OG1	CB1	HB1	105.0	109.5
CB1	OG1	HOG1	109.5	114.0
CG1	CB1	HB1	101.7	109.5
CB1	CG1	HG1	109.5	109.5
CB1	CG1	HG1A	109.4	109.5
CB1	CG1	HG1B	109.5	109.4
HG1	CG1	HG1A	109.4	109.5
HG1	CG1	HG1B	109.5	109.5
HG1A	CG1	HG1B	109.5	109.4
N3	C1	HC1	127.7	110.1
N2	C1	HC1	123.9	110.1
C1	N2	HN2	111.4	111.0
CA2	N2	HN2	111.4	111.0
O2	C2	CA2	131.9	125.7
C2	CA2	HA2	88.9	110.4
CB2	CA2	HA2	94.1	110.5
C3	CA3	HA31	112.0	109.5
C3	CA3	HA32	113.5	109.4
CA3	C3	OXT	119.2	120.0
HA31	CA3	HA32	104.0	109.5
C3	OXT	HXT	109.5	117.0
CG2	CB2	HB2	102.0	109.5
CG2	CB2	HB2A	96.3	109.4
CB2	CG2	CD1	124.1	119.9
HB2	CB2	HB2A	131.4	109.4
CG2	CD1	CE1	121.7	120.0
CG2	CD1	HD1	119.2	120.0
CE1	CD1	HD1	119.1	120.0
CD1	CE1	HE1	120.8	120.0
CE2	CD2	HD2	118.9	120.0
CD2	CE2	CZ	118.7	120.0
CD2	CE2	HE2	120.7	120.0
CZ	CE1	HE1	120.8	120.0
CZ	CE2	HE2	120.6	120.0
CE2	CZ	OH	117.0	120.1
CZ	OH	HOH	109.5	114.0

Torsion Angles for CJO

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H	N1	CA1	H2	240.0	236.1
CA1	N1	H	H2	120.0	123.9
CA1	N1	H2	H	240.0	236.1
C1	CA1	N1	H	333.0	60.0
C1	CA1	N1	H2	93.0	183.9
CB1	CA1	C1	HA1	245.0	240.0
C1	CA1	CB1	HB1	64.1	65.0
CB1	CA1	N1	H	208.2	300.0
CB1	CA1	N1	H2	328.2	63.9
C1	CA1	CB1	HA1	119.7	120.0
CG1	CB1	CA1	OG1	228.2	240.1
OG1	CB1	CA1	HB1	244.7	239.9
CA1	CB1	OG1	HOG1	29.9	300.0
CG1	CB1	CA1	HB1	112.9	120.0
CA1	CB1	CG1	HG1	173.5	59.9
CA1	CB1	CG1	HG1A	293.5	180.0
CA1	CB1	CG1	HG1B	53.5	299.9
HA1	CA1	N1	H	93.1	180.0
HA1	CA1	N1	H2	213.1	304.0
HA1	CA1	CB1	OG1	189.1	184.9
HA1	CA1	CB1	CG1	57.4	65.0
HA1	CA1	CB1	HB1	304.4	305.0
OG1	CB1	CA1	HA1	189.1	184.9
CA1	CB1	OG1	CG1	230.9	240.1
CA1	CB1	OG1	HB1	118.9	120.1
CG1	CB1	OG1	HB1	248.0	240.0
OG1	CB1	CG1	HG1	45.7	300.0
OG1	CB1	CG1	HG1A	165.7	60.1
OG1	CB1	CG1	HG1B	285.7	180.0
CG1	CB1	CA1	HA1	57.4	65.0
CA1	CB1	CG1	OG1	127.8	119.9
CA1	CB1	CG1	HB1	241.6	239.9
OG1	CB1	CG1	HB1	113.8	120.0
CG1	CB1	OG1	HOG1	159.1	60.0
HG1	CG1	CB1	HG1A	240.0	240.0
HG1	CG1	CB1	HG1B	120.0	120.0
HG1A	CG1	CB1	HG1B	240.0	240.1
HB1	CB1	CA1	HA1	304.4	305.0
CA1	CB1	HB1	OG1	242.0	240.0
CA1	CB1	HB1	CG1	119.5	120.0
CG1	CB1	HB1	OG1	122.5	119.9
HB1	CB1	OG1	HOG1	271.0	180.0
HB1	CB1	CG1	HG1	291.9	180.0
HB1	CB1	CG1	HG1A	51.9	300.1
HB1	CB1	CG1	HG1B	171.9	60.0
HG1	CG1	CB1	OG1	45.7	300.0
HG1	CG1	CB1	HB1	291.9	180.0
CB1	CG1	HG1	HG1A	120.0	120.0
CB1	CG1	HG1	HG1B	240.0	240.0
HG1A	CG1	HG1	HG1B	120.0	120.0
HG1A	CG1	CB1	OG1	165.7	60.1
HG1A	CG1	CB1	HB1	51.9	300.1
CB1	CG1	HG1A	HG1	240.0	239.9
CB1	CG1	HG1A	HG1B	120.0	119.9
HG1	CG1	HG1A	HG1B	240.0	240.0
HG1B	CG1	CB1	OG1	285.7	180.0
HG1B	CG1	CB1	HB1	171.9	60.0
CB1	CG1	HG1B	HG1	120.0	120.0
CB1	CG1	HG1B	HG1A	240.0	240.1
HG1	CG1	HG1B	HG1A	120.0	120.0
HOG1	OG1	CB1	HB1	271.0	180.0
N3	C1	CA1	HA1	322.6	303.2
N2	C1	N3	HC1	179.5	240.8
N3	C1	N2	HN2	119.9	91.9
N2	C1	CA1	HA1	142.5	186.4
N3	C1	N2	HC1	180.5	119.2
CA2	N2	C1	HN2	240.0	241.0
CA2	N2	C1	HC1	179.4	213.7
C1	N2	CA2	HN2	120.0	118.9
C2	N3	C1	HC1	180.5	136.8
CA3	N3	C1	HC1	0.5	316.7
O2	C2	CA2	HA2	303.1	282.0
C2	CA2	N2	HN2	240.2	267.4
CB2	CA2	C2	HA2	94.3	122.4
CB2	CA2	N2	HN2	30.3	26.2
C2	CA2	CB2	HA2	268.1	237.7
HA2	CA2	N2	HN2	137.5	148.6
HA31	CA3	C3	HA32	117.4	120.0
CA3	C3	OXT	HXT	180.0	180.0
C3	CA3	HA31	HA32	237.1	240.0
HA31	CA3	C3	OXT	235.5	59.9
C3	CA3	HA32	HA31	121.9	120.1
HA32	CA3	C3	OXT	118.1	299.9
O3	C3	CA3	HA31	55.4	240.0
O3	C3	CA3	HA32	298.0	120.0
O3	C3	OXT	HXT	0.0	360.0
OXT	C3	CA3	HA31	235.5	59.9
OXT	C3	CA3	HA32	118.1	299.9
CG2	CB2	CA2	HA2	291.5	305.8
HB2	CB2	CG2	HB2A	134.8	120.0
CB2	CG2	CD1	CE1	179.8	180.0
CB2	CG2	CD1	HD1	359.9	0.0
HB2	CB2	CA2	HA2	51.5	65.9
CG2	CB2	HB2	HB2A	250.3	240.0
HB2	CB2	CG2	CD1	182.6	330.0
HB2A	CB2	CA2	HA2	186.3	185.9
CG2	CB2	HB2A	HB2	112.1	120.0
HB2A	CB2	CG2	CD1	47.8	210.0
CD2	CG2	CB2	HB2	2.6	149.7
CD2	CG2	CB2	HB2A	227.8	29.8
CD2	CG2	CD1	CE1	359.8	0.2
CD2	CG2	CD1	HD1	179.9	180.2
CD1	CG2	CB2	HB2	182.6	330.0
CD1	CG2	CB2	HB2A	47.8	210.0
CE1	CD1	CG2	HD1	180.0	180.0
CG2	CD1	CE1	HE1	180.4	179.9
CG2	CD1	CE1	HD1	180.0	180.0
CZ	CE1	CD1	HE1	180.0	180.1
CG2	CD1	HD1	CE1	180.0	180.0
HD1	CD1	CE1	HE1	0.4	359.9
CZ	CE2	CD2	HE2	180.0	180.0
CD2	CE2	CZ	OH	180.2	180.0
HD2	CD2	CE2	CZ	179.6	180.0
HD2	CD2	CE2	HE2	359.7	0.0
CZ	CE1	CD1	HD1	180.4	180.0
CD1	CE1	CZ	HE1	180.0	179.9
CD2	CE2	CZ	CE1	0.6	0.3
HE1	CE1	CD1	HD1	0.4	359.9
CZ	CE2	CD2	HD2	179.6	180.0
CD2	CE2	CZ	HE2	180.0	180.0
CE2	CZ	CE1	HE1	179.4	179.8
CE2	CZ	OH	HOH	24.8	89.9
HE2	CE2	CD2	HD2	359.7	0.0
CD2	CE2	HE2	CZ	180.0	180.0
HE2	CE2	CZ	OH	0.2	360.0
OH	CZ	CE1	HE1	359.9	0.1
OH	CZ	CE2	HE2	0.2	360.0
HC1	C1	CA1	HA1	154.8	64.8
HC1	C1	N2	HN2	299.4	332.7
HN2	N2	C1	HC1	299.4	332.7