PDB Chemical Component CJB

Ideal Model

Chemical Description

Name 1-beta-D-glucopyranosylpyrimidine-2,4(1H,3H)-dione
Synonyms 1-D-glucopyranosyl-uracil; 1-beta-D-glucosylpyrimidine-2,4(1H,3H)-dione; 1-D-glucosylpyrimidine-2,4(1H,3H)-dione; 1-glucosylpyrimidine-2,4(1H,3H)-dione
Formula C10 H14 N2 O7
Formal charge 0
Molecular weight 274.227 g/mol
Component type D-saccharide

Chemical features

Atom count 33
Chiral atom count 5
Chiral atoms C1 C5 C4 C3 C2
Observed leaving atoms HO6 HO4 HO3 HO2
Bond count 34
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 1-(beta-D-glucopyranosyl)pyrimidine-2,4(1H,3H)-dione
Systematic name (OpenEye OEToolkits) 1-[(2R,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]pyrimidine-2,4-dione

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H]1O[C@H]([C@H](O)[C@@H](O)[C@@H]1O)N2C=CC(=O)NC2=O
SMILES (CACTVS) OC[CH]1O[CH]([CH](O)[CH](O)[CH]1O)N2C=CC(=O)NC2=O
Stereo SMILES (OpenEye) C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O
InChI descriptor InChI=1S/C10H14N2O7/c13-3-4-6(15)7(16)8(17)9(19-4)12-2-1-5(14)11-10(12)18/h1-2,4,6-9,13,15-17H,3H2,(H,11,14,18)/t4-,6-,7+,8-,9-/m1/s1
InChIKey descriptor PBGBADORVLQASN-DDIGBBAMSA-N

Status Information

Last modified 2020-07-17
Created 2007-11-16
Release status REL
Model PDB code 3BCS
Processing site PDBJ