PDB Chemical Component CJB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CJB

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C2A	1.396	1.345
N1	C6A	1.411	1.369
N1	C1	1.487	1.465
O2A	C2A	1.235	1.216
C2A	N3	1.400	1.346
N3	C4A	1.400	1.348
C4A	O4A	1.226	1.218
C4A	C5A	1.396	1.416
C5A	C6A	1.398	1.350
C1	O5	1.450	1.429
C1	C2	1.546	1.531
O5	C5	1.452	1.429
C5	C6	1.533	1.530
C5	C4	1.551	1.532
C6	O6	1.427	1.429
C4	O4	1.434	1.428
C4	C3	1.537	1.532
C3	O3	1.427	1.429
C3	C2	1.543	1.531
C2	O2	1.436	1.429
N3	HN3	1.000	0.971
C5A	H5A	1.080	1.080
C6A	H6	1.080	1.080
C1	H1	1.100	1.091
C5	H5	1.100	1.090
C6	H61	1.100	1.089
C6	H62	1.100	1.090
O6	HO6	0.950	0.966
C4	H4	1.100	1.090
O4	HO4	0.950	0.966
C3	H3	1.101	1.090
O3	HO3	0.950	0.967
C2	H2	1.100	1.090
O2	HO2	0.950	0.967

Bond Angles for CJB

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2A	N1	C6A	120.1	120.6
C2A	N1	C1	118.1	119.7
N1	C2A	O2A	120.3	119.5
N1	C2A	N3	118.9	120.9
C6A	N1	C1	121.8	119.6
N1	C6A	C5A	120.9	119.6
N1	C6A	H6	119.6	120.2
N1	C1	O5	109.9	109.5
N1	C1	C2	114.2	109.5
N1	C1	H1	107.7	109.5
O2A	C2A	N3	120.8	119.5
C2A	N3	C4A	120.7	120.3
C2A	N3	HN3	119.6	119.8
N3	C4A	O4A	118.6	120.4
N3	C4A	C5A	120.8	119.4
C4A	N3	HN3	119.7	119.9
O4A	C4A	C5A	120.7	120.3
C4A	C5A	C6A	118.5	119.1
C4A	C5A	H5A	120.7	120.5
C6A	C5A	H5A	120.7	120.4
C5A	C6A	H6	119.5	120.2
O5	C1	C2	109.6	109.4
C1	O5	C5	109.3	114.1
O5	C1	H1	108.2	109.5
C1	C2	C3	110.2	109.2
C1	C2	O2	110.7	109.5
C2	C1	H1	107.0	109.5
C1	C2	H2	107.7	109.5
O5	C5	C6	107.5	109.5
O5	C5	C4	112.4	109.4
O5	C5	H5	108.8	109.5
C6	C5	C4	112.6	109.5
C5	C6	O6	109.8	109.5
C6	C5	H5	107.8	109.5
C5	C6	H61	109.4	109.5
C5	C6	H62	109.4	109.4
C5	C4	O4	109.8	109.5
C5	C4	C3	112.0	109.1
C4	C5	H5	107.6	109.5
C5	C4	H4	107.8	109.5
O6	C6	H61	109.4	109.5
O6	C6	H62	109.4	109.5
C6	O6	HO6	109.5	114.0
O4	C4	C3	110.0	109.5
O4	C4	H4	109.3	109.5
C4	O4	HO4	109.5	114.0
C4	C3	O3	109.6	109.5
C4	C3	C2	110.8	109.0
C3	C4	H4	107.9	109.6
C4	C3	H3	108.5	109.6
O3	C3	C2	109.7	109.5
O3	C3	H3	109.9	109.6
C3	O3	HO3	109.5	114.0
C3	C2	O2	111.3	109.5
C2	C3	H3	108.4	109.6
C3	C2	H2	107.7	109.5
O2	C2	H2	109.1	109.6
C2	O2	HO2	109.5	114.0
H61	C6	H62	109.5	109.4

Torsion Angles for CJB

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6A	N1	C2A	C1	180.7	180.3
C2A	N1	C6A	C5A	359.2	360.0
C2A	N1	C6A	H6	179.2	180.0
C2A	N1	C1	O5	260.2	235.0
C2A	N1	C1	C2	136.5	115.0
C2A	N1	C1	H1	17.8	355.0
O2A	C2A	N1	N3	179.3	180.0
N1	C2A	N3	C4A	359.7	360.0
N1	C2A	N3	HN3	179.7	180.0
C2A	N1	C6A	C1	179.2	179.7
C6A	N1	C2A	O2A	180.2	180.0
C6A	N1	C2A	N3	0.9	0.0
C6A	N1	C1	O5	79.4	54.7
C6A	N1	C1	C2	315.8	294.8
C6A	N1	C1	H1	197.1	174.7
C4A	C5A	C6A	N1	0.0	360.0
N1	C6A	C5A	H5A	180.0	180.1
C5A	C6A	N1	H6	180.0	180.0
C2A	N1	C1	C6A	180.8	180.3
C1	N1	C2A	O2A	359.4	359.7
C1	N1	C2A	N3	180.2	179.7
C1	N1	C6A	C5A	180.0	180.3
C1	N1	C6A	H6	0.0	0.3
O5	C1	N1	C2	123.6	120.0
N1	C1	O5	C5	167.6	178.8
O5	C1	N1	H1	242.3	240.0
N1	C1	C2	C3	185.3	177.6
N1	C1	C2	O2	308.8	297.5
C2	C1	N1	H1	118.7	120.0
N1	C1	C2	H2	68.0	57.7
O2A	C2A	N1	C6A	180.2	180.0
O2A	C2A	N1	C1	359.4	359.7
N1	C2A	O2A	N3	180.7	180.0
O2A	C2A	N3	C4A	180.5	180.0
O2A	C2A	N3	HN3	0.5	0.0
N3	C2A	N1	C6A	0.9	0.0
N3	C2A	N1	C1	180.2	179.7
N1	C2A	N3	O2A	179.3	180.0
C2A	N3	C4A	O4A	179.7	180.1
C2A	N3	C4A	C5A	359.5	360.0
C4A	N3	C2A	HN3	180.0	180.0
C2A	N3	C4A	HN3	180.0	180.0
O4A	C4A	N3	C5A	180.3	180.1
N3	C4A	C5A	C6A	0.6	0.0
N3	C4A	C5A	H5A	180.6	180.0
N3	C4A	O4A	C5A	179.7	179.9
O4A	C4A	N3	HN3	359.7	0.0
O4A	C4A	C5A	C6A	180.4	180.0
O4A	C4A	C5A	H5A	0.4	359.9
N1	C6A	C5A	C4A	0.0	360.0
N3	C4A	C5A	O4A	180.3	180.1
C5A	C4A	N3	HN3	179.5	179.9
C6A	C5A	C4A	H5A	180.0	180.1
C4A	C5A	C6A	H6	180.0	180.0
C5A	C6A	N1	C1	180.0	180.3
N1	C6A	C5A	H6	180.0	180.0
C4A	C5A	C6A	H5A	180.0	179.9
N1	C1	O5	C2	233.7	240.0
N1	C1	O5	H1	117.4	120.0
O5	C1	C2	C3	61.4	57.6
O5	C1	C2	O2	185.0	177.5
C2	C1	O5	H1	243.7	240.0
O5	C1	C2	H2	304.2	297.7
C1	O5	C5	C6	185.7	181.2
C1	O5	C5	C4	61.2	61.2
C1	O5	C5	H5	302.1	301.2
N1	C1	C2	O5	123.8	120.0
N1	C1	C2	H1	240.9	240.0
C2	C1	O5	C5	294.0	298.8
O5	C1	C2	H1	117.1	120.0
C4	C3	C2	C1	309.1	303.0
O3	C3	C2	C1	188.0	183.2
C3	C2	C1	O2	236.4	240.1
C1	C2	C3	H3	68.0	62.9
C3	C2	C1	H2	117.2	119.9
O2	C2	C1	H2	240.8	239.8
C1	C2	O2	HO2	180.0	179.9
C5	O5	C1	C2	294.0	298.8
C5	O5	C1	H1	50.3	58.8
C6	C5	O5	C4	124.5	120.0
O5	C5	C6	O6	289.1	65.0
C6	C5	O5	H5	243.5	240.0
O5	C5	C6	H61	49.2	185.0
O5	C5	C6	H62	169.1	305.0
O5	C5	C4	O4	186.1	182.5
O5	C5	C4	C3	308.6	302.4
C4	C5	O5	H5	119.1	120.0
O5	C5	C4	H4	67.2	62.4
O5	C5	C6	C4	235.6	240.1
O5	C5	C6	H5	117.2	120.1
C6	C5	C4	O4	64.5	62.5
C6	C5	C4	C3	186.9	182.4
C4	C5	C6	H5	241.6	240.0
C6	C5	C4	H4	305.5	302.4
O6	C6	C5	H61	239.9	240.0
O6	C6	C5	H62	120.0	120.0
C5	C6	O6	HO6	180.0	180.0
H61	C6	C5	H62	240.1	240.0
O5	C5	C4	C6	121.6	120.0
O5	C5	C4	H5	240.2	240.0
C4	C5	C6	O6	53.5	184.9
C6	C5	C4	H5	118.5	120.0
C4	C5	C6	H61	173.6	305.0
C4	C5	C6	H62	293.5	64.9
O4	C4	C5	C3	237.5	240.1
O4	C4	C5	H4	118.9	120.1
C5	C4	O4	HO4	180.0	180.0
C5	C4	C3	O3	167.1	176.8
C5	C4	C3	C2	45.9	57.0
C3	C4	C5	H4	241.4	240.0
C5	C4	C3	H3	287.1	297.0
O6	C6	C5	C4	53.5	184.9
O6	C6	C5	H5	172.0	305.0
C5	C6	O6	H61	120.0	120.0
C5	C6	O6	H62	240.0	240.0
H61	C6	O6	H62	119.9	120.0
C5	C4	O4	C3	123.7	119.7
O4	C4	C5	H5	305.9	302.5
C5	C4	O4	H4	242.0	239.9
O4	C4	C3	O3	289.5	296.7
O4	C4	C3	C2	168.3	176.9
C3	C4	O4	H4	118.3	120.2
O4	C4	C3	H3	49.5	56.9
C1	C2	C3	C4	309.1	303.0
C5	C4	C3	O4	237.6	240.1
C3	C4	C5	H5	68.4	62.4
C5	C4	C3	H4	118.5	119.9
O4	C4	C3	H4	240.8	239.8
C3	C4	O4	HO4	56.4	60.4
O3	C3	C4	C2	121.2	119.8
O3	C3	C4	H3	240.0	239.8
C4	C3	O3	HO3	180.0	60.1
C4	C3	C2	O2	185.9	183.1
C2	C3	C4	H3	118.8	120.0
C4	C3	C2	H2	66.3	62.9
C1	C2	C3	O3	188.0	183.2
C4	C3	O3	C2	238.2	240.5
O3	C3	C4	H4	48.7	56.9
C4	C3	O3	H3	119.1	120.2
O3	C3	C2	O2	64.8	63.3
C2	C3	O3	H3	240.9	239.7
O3	C3	C2	H2	305.2	303.1
C1	C2	C3	O2	123.2	119.9
C3	C2	C1	H1	304.4	297.7
C1	C2	C3	H2	242.8	240.1
C4	C3	C2	O3	121.1	119.8
C2	C3	C4	H4	287.4	297.1
C4	C3	C2	H3	241.1	240.0
O3	C3	C2	H3	120.0	120.3
C2	C3	O3	HO3	301.8	179.6
O2	C2	C3	H2	119.6	120.2
C3	C2	O2	HO2	302.9	299.6
C1	C2	O2	C3	237.1	240.3
O2	C2	C1	H1	67.9	57.5
C1	C2	O2	H2	118.3	120.2
O2	C2	C3	H3	304.8	303.0
C3	C2	O2	H2	241.2	239.8
C2A	N3	HN3	C4A	180.0	180.0
HN3	N3	C4A	O4A	359.7	0.0
HN3	N3	C4A	C5A	179.5	179.9
C4A	C5A	H5A	C6A	180.0	180.1
H5A	C5A	C6A	H6	360.0	0.1
H6	C6A	N1	C1	0.0	0.3
N1	C6A	H6	C5A	180.0	180.0
H6	C6A	C5A	H5A	360.0	0.1
N1	C1	H1	O5	241.2	240.0
N1	C1	H1	C2	123.2	120.1
O5	C1	H1	C2	242.0	240.1
H1	C1	O5	C5	50.3	58.8
H1	C1	C2	C3	304.4	297.7
H1	C1	C2	O2	67.9	57.5
H1	C1	C2	H2	187.1	177.7
O5	C5	H5	C6	243.7	240.0
O5	C5	H5	C4	122.1	119.9
C6	C5	H5	C4	238.4	240.0
H5	C5	C6	O6	172.0	305.0
H5	C5	C6	H61	292.0	65.0
H5	C5	C6	H62	51.9	184.9
H5	C5	C4	O4	305.9	302.5
H5	C5	C4	C3	68.4	62.4
H5	C5	C4	H4	187.0	182.4
H61	C6	C5	C4	173.6	305.0
C5	C6	H61	O6	239.7	240.0
H61	C6	C5	H5	292.0	65.0
C5	C6	H61	H62	119.8	120.0
O6	C6	H61	H62	240.1	240.0
H61	C6	O6	HO6	60.0	60.0
H62	C6	C5	C4	293.5	64.9
C5	C6	H62	O6	120.3	120.0
H62	C6	C5	H5	51.9	184.9
C5	C6	H62	H61	240.2	240.0
O6	C6	H62	H61	119.9	120.0
H62	C6	O6	HO6	300.0	300.0
HO6	O6	C6	H61	60.0	60.0
HO6	O6	C6	H62	300.0	300.0
C5	C4	H4	O4	119.2	120.1
C5	C4	H4	C3	238.8	240.3
H4	C4	C5	H5	187.0	182.4
O4	C4	H4	C3	119.6	120.2
H4	C4	O4	HO4	298.0	300.1
H4	C4	C3	O3	48.7	56.9
H4	C4	C3	C2	287.4	297.1
H4	C4	C3	H3	168.6	177.1
HO4	O4	C4	C3	56.4	60.4
HO4	O4	C4	H4	298.0	300.1
C4	C3	H3	O3	240.2	239.9
C4	C3	H3	C2	120.3	119.6
H3	C3	C4	H4	168.6	177.1
O3	C3	H3	C2	240.1	239.8
H3	C3	O3	HO3	60.9	299.9
H3	C3	C2	O2	304.8	303.0
H3	C3	C2	H2	185.2	182.8
HO3	O3	C3	C2	301.8	179.6
HO3	O3	C3	H3	60.9	299.9
C1	C2	H2	C3	118.8	119.7
C1	C2	H2	O2	239.8	239.8
H2	C2	C1	H1	187.1	177.7
C3	C2	H2	O2	121.0	120.1
H2	C2	C3	H3	185.2	182.8
H2	C2	O2	HO2	61.7	59.8
HO2	O2	C2	H2	61.7	59.8