PDB Chemical Component CIT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CIT
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
O1 |
1.102 |
1.207 |
C1 |
O2 |
1.192 |
1.342 |
C1 |
C2 |
1.554 |
1.506 |
O2 |
HO2 |
0.949 |
0.967 |
C2 |
C3 |
1.558 |
1.529 |
C2 |
H21 |
1.115 |
1.090 |
C2 |
H22 |
1.114 |
1.090 |
C3 |
O7 |
1.458 |
1.428 |
C3 |
C4 |
1.546 |
1.529 |
C3 |
C6 |
1.508 |
1.506 |
O7 |
HO7 |
0.950 |
0.968 |
C4 |
C5 |
1.510 |
1.506 |
C4 |
H41 |
1.115 |
1.090 |
C4 |
H42 |
1.115 |
1.090 |
C5 |
O3 |
1.328 |
1.207 |
C5 |
O4 |
1.201 |
1.342 |
O4 |
HO4 |
0.951 |
0.967 |
C6 |
O5 |
1.275 |
1.207 |
C6 |
O6 |
1.271 |
1.343 |
O6 |
HO6 |
0.950 |
0.967 |
Bond Angles for CIT
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
O2 |
129.6 |
120.0 |
O1 |
C1 |
C2 |
120.5 |
120.0 |
O2 |
C1 |
C2 |
109.8 |
120.0 |
C1 |
O2 |
HO2 |
129.6 |
120.0 |
C1 |
C2 |
C3 |
120.4 |
109.5 |
C1 |
C2 |
H21 |
108.3 |
109.4 |
C1 |
C2 |
H22 |
108.3 |
109.5 |
C3 |
C2 |
H21 |
108.3 |
109.5 |
C3 |
C2 |
H22 |
108.3 |
109.5 |
C2 |
C3 |
O7 |
111.5 |
109.4 |
C2 |
C3 |
C4 |
108.5 |
109.5 |
C2 |
C3 |
C6 |
110.0 |
109.5 |
H21 |
C2 |
H22 |
101.6 |
109.4 |
O7 |
C3 |
C4 |
104.4 |
109.4 |
O7 |
C3 |
C6 |
110.0 |
109.4 |
C3 |
O7 |
HO7 |
111.5 |
106.8 |
C4 |
C3 |
C6 |
112.4 |
109.5 |
C3 |
C4 |
C5 |
112.1 |
109.5 |
C3 |
C4 |
H41 |
111.3 |
109.5 |
C3 |
C4 |
H42 |
111.3 |
109.5 |
C3 |
C6 |
O5 |
116.4 |
120.0 |
C3 |
C6 |
O6 |
118.3 |
119.9 |
C5 |
C4 |
H41 |
111.2 |
109.4 |
C5 |
C4 |
H42 |
111.2 |
109.5 |
C4 |
C5 |
O3 |
114.2 |
120.0 |
C4 |
C5 |
O4 |
126.3 |
120.0 |
H41 |
C4 |
H42 |
99.1 |
109.4 |
O3 |
C5 |
O4 |
119.3 |
120.0 |
C5 |
O4 |
HO4 |
126.3 |
120.0 |
O5 |
C6 |
O6 |
125.2 |
120.0 |
C6 |
O6 |
HO6 |
118.3 |
120.0 |
Torsion Angles for CIT
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2 |
C1 |
O1 |
C2 |
175.9 |
180.1 |
O1 |
C1 |
O2 |
HO2 |
179.9 |
359.9 |
O1 |
C1 |
C2 |
C3 |
265.0 |
0.0 |
O1 |
C1 |
C2 |
H21 |
30.3 |
120.0 |
O1 |
C1 |
C2 |
H22 |
139.8 |
240.0 |
O1 |
C1 |
O2 |
C2 |
183.8 |
179.9 |
O2 |
C1 |
C2 |
C3 |
88.4 |
179.9 |
O2 |
C1 |
C2 |
H21 |
213.7 |
299.9 |
O2 |
C1 |
C2 |
H22 |
323.1 |
59.9 |
O1 |
C1 |
C2 |
O2 |
176.6 |
180.1 |
C2 |
C1 |
O2 |
HO2 |
356.2 |
180.0 |
C3 |
C2 |
C1 |
H21 |
234.7 |
240.0 |
C3 |
C2 |
C1 |
H22 |
125.3 |
120.0 |
C1 |
C2 |
C3 |
O7 |
302.4 |
60.0 |
C1 |
C2 |
C3 |
C4 |
56.9 |
179.9 |
C1 |
C2 |
C3 |
C6 |
180.2 |
300.0 |
H21 |
C2 |
C1 |
H22 |
250.5 |
240.0 |
HO2 |
O2 |
C1 |
C2 |
356.2 |
180.0 |
C1 |
C2 |
C3 |
H21 |
125.3 |
120.0 |
C1 |
C2 |
C3 |
H22 |
234.7 |
239.9 |
H21 |
C2 |
C3 |
H22 |
109.4 |
120.0 |
O7 |
C3 |
C2 |
C4 |
245.5 |
240.0 |
O7 |
C3 |
C2 |
C6 |
122.2 |
120.0 |
C2 |
C3 |
O7 |
HO7 |
179.9 |
60.0 |
C4 |
C3 |
C2 |
C6 |
236.7 |
239.9 |
C2 |
C3 |
C4 |
C5 |
172.7 |
180.1 |
C2 |
C3 |
C4 |
H41 |
297.9 |
300.0 |
C2 |
C3 |
C4 |
H42 |
47.4 |
60.0 |
C2 |
C3 |
C6 |
O5 |
288.2 |
120.0 |
C2 |
C3 |
C6 |
O6 |
105.6 |
300.0 |
C1 |
C2 |
H21 |
C3 |
227.9 |
240.0 |
C1 |
C2 |
H21 |
H22 |
114.0 |
120.0 |
C3 |
C2 |
H21 |
H22 |
246.1 |
240.0 |
H21 |
C2 |
C3 |
O7 |
177.1 |
300.0 |
H21 |
C2 |
C3 |
C4 |
291.6 |
60.0 |
H21 |
C2 |
C3 |
C6 |
54.9 |
180.0 |
C1 |
C2 |
H22 |
C3 |
132.1 |
120.0 |
C1 |
C2 |
H22 |
H21 |
246.0 |
240.0 |
C3 |
C2 |
H22 |
H21 |
113.9 |
120.0 |
H22 |
C2 |
C3 |
O7 |
67.7 |
180.0 |
H22 |
C2 |
C3 |
C4 |
182.2 |
300.0 |
H22 |
C2 |
C3 |
C6 |
305.5 |
60.1 |
O7 |
C3 |
C2 |
H21 |
177.1 |
300.0 |
O7 |
C3 |
C2 |
H22 |
67.7 |
180.0 |
C2 |
C3 |
O7 |
C4 |
117.0 |
120.0 |
C2 |
C3 |
O7 |
C6 |
237.8 |
240.0 |
C4 |
C3 |
O7 |
C6 |
120.8 |
120.0 |
O7 |
C3 |
C4 |
C5 |
291.7 |
300.0 |
O7 |
C3 |
C4 |
H41 |
56.9 |
60.0 |
O7 |
C3 |
C4 |
H42 |
166.5 |
180.0 |
O7 |
C3 |
C6 |
O5 |
165.1 |
-0.0 |
O7 |
C3 |
C6 |
O6 |
342.5 |
180.0 |
C4 |
C3 |
C2 |
H21 |
291.6 |
60.0 |
C4 |
C3 |
C2 |
H22 |
182.2 |
300.0 |
C2 |
C3 |
C4 |
O7 |
241.0 |
240.0 |
C2 |
C3 |
C4 |
C6 |
121.8 |
120.1 |
O7 |
C3 |
C4 |
C6 |
240.9 |
240.0 |
C4 |
C3 |
O7 |
HO7 |
62.9 |
300.0 |
C4 |
C3 |
C6 |
O5 |
49.2 |
240.0 |
C4 |
C3 |
C6 |
O6 |
226.6 |
60.0 |
C5 |
C4 |
C3 |
H41 |
234.8 |
240.0 |
C5 |
C4 |
C3 |
H42 |
125.2 |
120.1 |
C3 |
C4 |
C5 |
O3 |
173.2 |
360.0 |
C3 |
C4 |
C5 |
O4 |
348.1 |
180.1 |
H41 |
C4 |
C3 |
H42 |
250.5 |
240.0 |
C6 |
C3 |
C2 |
H21 |
54.9 |
180.0 |
C6 |
C3 |
C2 |
H22 |
305.5 |
60.1 |
C2 |
C3 |
C6 |
O7 |
123.1 |
120.0 |
C2 |
C3 |
C6 |
C4 |
239.0 |
239.9 |
O7 |
C3 |
C6 |
C4 |
115.9 |
120.0 |
C6 |
C3 |
O7 |
HO7 |
302.2 |
180.0 |
C6 |
C3 |
C4 |
C5 |
50.8 |
60.0 |
C6 |
C3 |
C4 |
H41 |
176.1 |
180.0 |
C6 |
C3 |
C4 |
H42 |
285.6 |
299.9 |
O5 |
C6 |
C3 |
O6 |
182.6 |
180.0 |
C3 |
C6 |
O6 |
HO6 |
179.9 |
180.0 |
HO7 |
O7 |
C3 |
C4 |
62.9 |
300.0 |
HO7 |
O7 |
C3 |
C6 |
302.2 |
180.0 |
C5 |
C4 |
C3 |
C6 |
50.8 |
60.0 |
C3 |
C4 |
C5 |
H41 |
125.3 |
120.0 |
C3 |
C4 |
C5 |
H42 |
234.7 |
240.0 |
H41 |
C4 |
C5 |
H42 |
109.4 |
120.0 |
O3 |
C5 |
C4 |
O4 |
185.2 |
179.9 |
C4 |
C5 |
O4 |
HO4 |
180.0 |
180.0 |
H41 |
C4 |
C3 |
C6 |
176.1 |
180.0 |
C3 |
C4 |
H41 |
C5 |
234.3 |
240.0 |
C3 |
C4 |
H41 |
H42 |
117.2 |
120.0 |
C5 |
C4 |
H41 |
H42 |
242.9 |
240.0 |
H41 |
C4 |
C5 |
O3 |
47.9 |
240.0 |
H41 |
C4 |
C5 |
O4 |
222.8 |
60.1 |
H42 |
C4 |
C3 |
C6 |
285.6 |
299.9 |
C3 |
C4 |
H42 |
C5 |
125.7 |
120.0 |
C3 |
C4 |
H42 |
H41 |
242.8 |
240.0 |
C5 |
C4 |
H42 |
H41 |
117.1 |
120.0 |
H42 |
C4 |
C5 |
O3 |
298.5 |
120.0 |
H42 |
C4 |
C5 |
O4 |
113.3 |
300.1 |
O3 |
C5 |
C4 |
H41 |
47.9 |
240.0 |
O3 |
C5 |
C4 |
H42 |
298.5 |
120.0 |
C4 |
C5 |
O3 |
O4 |
175.2 |
180.1 |
O3 |
C5 |
O4 |
HO4 |
354.6 |
0.1 |
O4 |
C5 |
C4 |
H41 |
222.8 |
60.1 |
O4 |
C5 |
C4 |
H42 |
113.3 |
300.1 |
C4 |
C5 |
O4 |
O3 |
185.4 |
179.9 |
C3 |
C6 |
O5 |
O6 |
177.2 |
180.0 |
O5 |
C6 |
O6 |
HO6 |
357.0 |
-0.0 |
C3 |
C6 |
O6 |
O5 |
182.9 |
180.0 |