PDB Chemical Component CIN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CIN
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C2 |
1.395 |
1.398 |
| C1 |
C6 |
1.379 |
1.398 |
| C1 |
C1' |
1.516 |
1.472 |
| C2 |
C3 |
1.378 |
1.376 |
| C2 |
H2 |
1.103 |
1.080 |
| C3 |
C4 |
1.386 |
1.398 |
| C3 |
H3 |
1.103 |
1.079 |
| C4 |
C5 |
1.374 |
1.396 |
| C4 |
C4' |
1.524 |
1.477 |
| C5 |
C6 |
1.392 |
1.376 |
| C5 |
H5 |
1.103 |
1.080 |
| C6 |
H6 |
1.103 |
1.080 |
| C1' |
C2' |
1.304 |
1.348 |
| C1' |
H1' |
1.103 |
1.080 |
| C2' |
C3' |
1.519 |
1.464 |
| C2' |
H2' |
1.103 |
1.080 |
| C3' |
O1' |
1.231 |
1.215 |
| C3' |
O2' |
1.335 |
1.349 |
| C4' |
O3' |
1.222 |
1.214 |
| C4' |
O4' |
1.335 |
1.347 |
| O2' |
HO2 |
0.950 |
0.968 |
| O4' |
HO4 |
0.950 |
0.968 |
Bond Angles for CIN
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C6 |
119.3 |
120.0 |
| C2 |
C1 |
C1' |
123.6 |
120.0 |
| C1 |
C2 |
C3 |
120.6 |
120.0 |
| C1 |
C2 |
H2 |
120.3 |
120.0 |
| C6 |
C1 |
C1' |
117.1 |
120.0 |
| C1 |
C6 |
C5 |
119.8 |
120.0 |
| C1 |
C6 |
H6 |
119.6 |
120.0 |
| C1 |
C1' |
C2' |
125.7 |
120.0 |
| C1 |
C1' |
H1' |
125.5 |
120.0 |
| C3 |
C2 |
H2 |
119.2 |
120.0 |
| C2 |
C3 |
C4 |
120.0 |
120.0 |
| C2 |
C3 |
H3 |
119.7 |
120.0 |
| C4 |
C3 |
H3 |
120.3 |
120.0 |
| C3 |
C4 |
C5 |
119.6 |
120.0 |
| C3 |
C4 |
C4' |
117.0 |
119.9 |
| C5 |
C4 |
C4' |
123.4 |
120.1 |
| C4 |
C5 |
C6 |
120.7 |
120.1 |
| C4 |
C5 |
H5 |
119.0 |
119.9 |
| C4 |
C4' |
O3' |
123.0 |
120.1 |
| C4 |
C4' |
O4' |
114.5 |
119.9 |
| C6 |
C5 |
H5 |
120.3 |
120.0 |
| C5 |
C6 |
H6 |
120.6 |
120.0 |
| C2' |
C1' |
H1' |
108.8 |
119.9 |
| C1' |
C2' |
C3' |
120.8 |
120.0 |
| C1' |
C2' |
H2' |
112.0 |
120.0 |
| C3' |
C2' |
H2' |
127.3 |
120.0 |
| C2' |
C3' |
O1' |
121.7 |
120.0 |
| C2' |
C3' |
O2' |
113.0 |
120.0 |
| O1' |
C3' |
O2' |
125.2 |
120.0 |
| C3' |
O2' |
HO2 |
113.0 |
120.0 |
| O3' |
C4' |
O4' |
122.5 |
120.0 |
| C4' |
O4' |
HO4 |
114.5 |
120.0 |
Torsion Angles for CIN
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
C2 |
C1' |
179.5 |
180.2 |
| C2 |
C1 |
C6 |
C5 |
2.2 |
359.5 |
| C2 |
C1 |
C6 |
H6 |
182.2 |
180.0 |
| C2 |
C1 |
C1' |
C2' |
0.3 |
180.0 |
| C2 |
C1 |
C1' |
H1' |
180.3 |
-0.0 |
| C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
| C1 |
C2 |
C3 |
C4 |
360.0 |
-0.0 |
| C1 |
C2 |
C3 |
H3 |
180.0 |
180.0 |
| C2 |
C1 |
C6 |
C1' |
180.5 |
179.8 |
| C6 |
C1 |
C2 |
C3 |
358.9 |
0.2 |
| C6 |
C1 |
C2 |
H2 |
178.9 |
180.2 |
| C6 |
C1 |
C1' |
C2' |
180.9 |
359.8 |
| C6 |
C1 |
C1' |
H1' |
0.8 |
179.8 |
| C4 |
C5 |
C6 |
C1 |
357.8 |
0.6 |
| C1 |
C6 |
C5 |
H5 |
177.9 |
180.2 |
| C5 |
C6 |
C1 |
H6 |
180.0 |
179.5 |
| C2 |
C1 |
C1' |
C6 |
179.5 |
180.2 |
| C1' |
C1 |
C2 |
C3 |
179.4 |
180.0 |
| C1' |
C1 |
C2 |
H2 |
359.4 |
-0.0 |
| C1' |
C1 |
C6 |
C5 |
181.7 |
179.7 |
| C1' |
C1 |
C6 |
H6 |
1.7 |
0.2 |
| C2' |
C1' |
C1 |
H1' |
180.0 |
180.0 |
| C1 |
C1' |
C2' |
C3' |
180.1 |
180.0 |
| C1 |
C1' |
C2' |
H2' |
0.1 |
-0.0 |
| C3 |
C2 |
C1 |
C6 |
358.9 |
0.2 |
| C3 |
C2 |
C1 |
C1' |
179.4 |
180.0 |
| C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
| C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
| C2 |
C3 |
C4 |
C5 |
0.1 |
0.0 |
| C2 |
C3 |
C4 |
C4' |
179.6 |
180.0 |
| H2 |
C2 |
C1 |
C6 |
178.9 |
180.2 |
| H2 |
C2 |
C1 |
C1' |
359.4 |
-0.0 |
| C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
| H2 |
C2 |
C3 |
C4 |
180.0 |
180.0 |
| H2 |
C2 |
C3 |
H3 |
0.0 |
-0.0 |
| C4 |
C3 |
C2 |
H2 |
180.0 |
180.0 |
| C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
| C5 |
C4 |
C3 |
C4' |
180.4 |
180.0 |
| C3 |
C4 |
C5 |
C6 |
1.0 |
359.7 |
| C3 |
C4 |
C5 |
H5 |
181.0 |
180.0 |
| C3 |
C4 |
C4' |
O3' |
174.1 |
-0.0 |
| C3 |
C4 |
C4' |
O4' |
356.6 |
180.0 |
| H3 |
C3 |
C2 |
H2 |
0.0 |
-0.0 |
| C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
| H3 |
C3 |
C4 |
C5 |
180.0 |
180.0 |
| H3 |
C3 |
C4 |
C4' |
359.6 |
360.0 |
| C1 |
C6 |
C5 |
C4 |
357.8 |
0.6 |
| C5 |
C4 |
C3 |
H3 |
180.0 |
180.0 |
| C3 |
C4 |
C5 |
C4' |
179.5 |
180.0 |
| C5 |
C4 |
C4' |
O3' |
353.6 |
180.0 |
| C5 |
C4 |
C4' |
O4' |
176.2 |
360.0 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
179.7 |
| C4 |
C5 |
C6 |
H6 |
177.8 |
180.0 |
| C4' |
C4 |
C3 |
H3 |
359.6 |
360.0 |
| C3 |
C4 |
C4' |
C5 |
180.5 |
180.0 |
| C4' |
C4 |
C5 |
C6 |
181.5 |
179.7 |
| C4' |
C4 |
C5 |
H5 |
1.5 |
0.0 |
| O3' |
C4' |
C4 |
O4' |
177.5 |
180.0 |
| C4 |
C4' |
O4' |
HO4 |
180.0 |
180.0 |
| C5 |
C6 |
C1 |
C1' |
181.7 |
179.7 |
| C1 |
C6 |
C5 |
H6 |
180.0 |
180.5 |
| C6 |
C5 |
C4 |
C4' |
181.5 |
179.7 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
180.3 |
| H5 |
C5 |
C4 |
C4' |
1.5 |
0.0 |
| C4 |
C5 |
H5 |
C6 |
180.0 |
179.7 |
| H5 |
C5 |
C6 |
H6 |
357.9 |
359.7 |
| H6 |
C6 |
C1 |
C1' |
1.7 |
0.2 |
| C1 |
C6 |
H6 |
C5 |
180.0 |
179.5 |
| H6 |
C6 |
C5 |
H5 |
357.9 |
359.7 |
| C1 |
C1' |
C2' |
H1' |
180.0 |
180.0 |
| C3' |
C2' |
C1' |
H2' |
180.0 |
180.0 |
| C1' |
C2' |
C3' |
O1' |
218.3 |
-0.0 |
| C1' |
C2' |
C3' |
O2' |
42.2 |
180.0 |
| C1 |
C1' |
H1' |
C2' |
180.0 |
180.0 |
| H1' |
C1' |
C2' |
C3' |
0.1 |
-0.0 |
| H1' |
C1' |
C2' |
H2' |
180.1 |
180.0 |
| C3' |
C2' |
C1' |
H1' |
0.1 |
-0.0 |
| C1' |
C2' |
C3' |
H2' |
180.0 |
180.0 |
| O1' |
C3' |
C2' |
O2' |
176.1 |
180.0 |
| C2' |
C3' |
O2' |
HO2 |
180.0 |
180.0 |
| H2' |
C2' |
C1' |
H1' |
180.1 |
180.0 |
| C1' |
C2' |
H2' |
C3' |
180.0 |
180.0 |
| H2' |
C2' |
C3' |
O1' |
38.3 |
180.0 |
| H2' |
C2' |
C3' |
O2' |
222.2 |
-0.0 |
| O1' |
C3' |
C2' |
H2' |
38.3 |
180.0 |
| C2' |
C3' |
O1' |
O2' |
184.4 |
180.0 |
| O1' |
C3' |
O2' |
HO2 |
4.0 |
-0.0 |
| O2' |
C3' |
C2' |
H2' |
222.2 |
-0.0 |
| C2' |
C3' |
O2' |
O1' |
176.0 |
180.0 |
| C4 |
C4' |
O3' |
O4' |
182.7 |
180.0 |
| O3' |
C4' |
O4' |
HO4 |
2.6 |
360.0 |
| C4 |
C4' |
O4' |
O3' |
177.5 |
180.0 |