PDB Chemical Component CGU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CGU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.455 |
1.468 |
| N |
H |
1.020 |
1.008 |
| N |
H2 |
1.020 |
1.009 |
| CA |
C |
1.548 |
1.506 |
| CA |
CB |
1.541 |
1.529 |
| CA |
HA |
1.115 |
1.090 |
| C |
O |
1.235 |
1.208 |
| C |
OXT |
1.333 |
1.342 |
| OXT |
HXT |
0.950 |
0.967 |
| CB |
CG |
1.549 |
1.529 |
| CB |
HB2 |
1.116 |
1.089 |
| CB |
HB3 |
1.114 |
1.090 |
| CG |
CD1 |
1.535 |
1.506 |
| CG |
CD2 |
1.515 |
1.506 |
| CG |
HG |
1.114 |
1.090 |
| CD1 |
OE11 |
1.253 |
1.208 |
| CD1 |
OE12 |
1.254 |
1.342 |
| CD2 |
OE21 |
1.248 |
1.208 |
| CD2 |
OE22 |
1.247 |
1.342 |
| OE12 |
HE12 |
0.951 |
0.966 |
| OE22 |
HE22 |
0.951 |
0.966 |
Bond Angles for CGU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
106.5 |
106.7 |
| CA |
N |
H2 |
113.4 |
106.7 |
| N |
CA |
C |
106.4 |
109.5 |
| N |
CA |
CB |
111.1 |
109.4 |
| N |
CA |
HA |
112.0 |
109.4 |
| H |
N |
H2 |
113.3 |
106.7 |
| C |
CA |
CB |
113.9 |
109.6 |
| C |
CA |
HA |
109.2 |
109.5 |
| CA |
C |
O |
120.1 |
120.0 |
| CA |
C |
OXT |
117.7 |
120.0 |
| CB |
CA |
HA |
104.3 |
109.4 |
| CA |
CB |
CG |
120.9 |
109.5 |
| CA |
CB |
HB2 |
108.1 |
109.5 |
| CA |
CB |
HB3 |
108.1 |
109.5 |
| O |
C |
OXT |
121.8 |
120.0 |
| C |
OXT |
HXT |
117.7 |
120.0 |
| CG |
CB |
HB2 |
108.1 |
109.5 |
| CG |
CB |
HB3 |
108.2 |
109.4 |
| CB |
CG |
CD1 |
111.9 |
109.5 |
| CB |
CG |
CD2 |
110.6 |
109.5 |
| CB |
CG |
HG |
108.4 |
109.4 |
| HB2 |
CB |
HB3 |
101.8 |
109.4 |
| CD1 |
CG |
CD2 |
113.2 |
109.5 |
| CD1 |
CG |
HG |
105.5 |
109.5 |
| CG |
CD1 |
OE11 |
117.6 |
120.0 |
| CG |
CD1 |
OE12 |
120.0 |
120.0 |
| CD2 |
CG |
HG |
106.9 |
109.4 |
| CG |
CD2 |
OE21 |
119.0 |
120.0 |
| CG |
CD2 |
OE22 |
117.1 |
120.0 |
| OE11 |
CD1 |
OE12 |
122.4 |
120.0 |
| CD1 |
OE12 |
HE12 |
120.0 |
120.1 |
| OE21 |
CD2 |
OE22 |
123.9 |
120.0 |
| CD2 |
OE22 |
HE22 |
117.1 |
120.1 |
Torsion Angles for CGU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
125.2 |
246.2 |
| C |
CA |
N |
CB |
124.4 |
120.1 |
| C |
CA |
N |
HA |
240.7 |
240.0 |
| N |
CA |
C |
O |
117.6 |
329.9 |
| N |
CA |
C |
OXT |
304.3 |
150.1 |
| CB |
CA |
N |
HA |
116.3 |
119.9 |
| N |
CA |
CB |
CG |
239.9 |
300.0 |
| N |
CA |
CB |
HB2 |
5.1 |
60.1 |
| N |
CA |
CB |
HB3 |
114.6 |
180.0 |
| CA |
N |
H |
H2 |
234.7 |
113.8 |
| H |
N |
CA |
C |
180.0 |
60.0 |
| H |
N |
CA |
CB |
55.6 |
299.9 |
| H |
N |
CA |
HA |
299.3 |
180.0 |
| CA |
N |
H2 |
H |
121.5 |
246.2 |
| H2 |
N |
CA |
C |
54.8 |
173.9 |
| H2 |
N |
CA |
CB |
290.4 |
53.7 |
| H2 |
N |
CA |
HA |
174.1 |
293.8 |
| C |
CA |
N |
H |
180.0 |
60.0 |
| C |
CA |
N |
H2 |
54.8 |
173.9 |
| N |
CA |
C |
CB |
237.3 |
240.0 |
| N |
CA |
C |
HA |
121.1 |
119.9 |
| CB |
CA |
C |
HA |
243.8 |
240.0 |
| C |
CA |
CB |
CG |
119.8 |
180.0 |
| C |
CA |
CB |
HB2 |
245.0 |
300.0 |
| C |
CA |
CB |
HB3 |
354.5 |
60.0 |
| O |
C |
CA |
OXT |
173.3 |
179.9 |
| CA |
C |
OXT |
HXT |
180.0 |
180.1 |
| CB |
CA |
N |
H |
55.6 |
299.9 |
| CB |
CA |
N |
H2 |
290.4 |
53.7 |
| N |
CA |
CB |
C |
120.1 |
120.1 |
| N |
CA |
CB |
HA |
239.1 |
240.1 |
| C |
CA |
CB |
HA |
119.0 |
120.1 |
| CB |
CA |
C |
O |
240.3 |
90.0 |
| CB |
CA |
C |
OXT |
67.0 |
270.1 |
| CG |
CB |
CA |
HB2 |
234.8 |
239.9 |
| CG |
CB |
CA |
HB3 |
125.3 |
120.0 |
| CA |
CB |
CG |
CD1 |
135.1 |
179.9 |
| CA |
CB |
CG |
CD2 |
7.9 |
300.1 |
| CA |
CB |
CG |
HG |
251.0 |
60.0 |
| HB2 |
CB |
CA |
HB3 |
250.5 |
240.0 |
| HA |
CA |
N |
H |
299.3 |
180.0 |
| HA |
CA |
N |
H2 |
174.1 |
293.8 |
| N |
CA |
HA |
C |
242.4 |
240.0 |
| N |
CA |
HA |
CB |
120.3 |
119.9 |
| C |
CA |
HA |
CB |
237.9 |
239.9 |
| HA |
CA |
C |
O |
356.5 |
210.0 |
| HA |
CA |
C |
OXT |
183.2 |
30.1 |
| HA |
CA |
CB |
CG |
0.8 |
59.9 |
| HA |
CA |
CB |
HB2 |
126.0 |
180.0 |
| HA |
CA |
CB |
HB3 |
235.5 |
299.9 |
| O |
C |
CA |
CB |
240.3 |
90.0 |
| O |
C |
CA |
HA |
356.5 |
210.0 |
| CA |
C |
O |
OXT |
187.0 |
180.1 |
| O |
C |
OXT |
HXT |
6.8 |
0.2 |
| OXT |
C |
CA |
CB |
67.0 |
270.1 |
| OXT |
C |
CA |
HA |
183.2 |
30.1 |
| CA |
C |
OXT |
O |
173.2 |
179.9 |
| CG |
CB |
CA |
HA |
0.8 |
59.9 |
| CA |
CB |
CG |
HB2 |
125.2 |
120.0 |
| CA |
CB |
CG |
HB3 |
234.7 |
240.0 |
| HB2 |
CB |
CG |
HB3 |
109.5 |
119.9 |
| CD1 |
CG |
CB |
CD2 |
127.2 |
239.9 |
| CD1 |
CG |
CB |
HG |
244.1 |
120.0 |
| CB |
CG |
CD1 |
OE11 |
187.7 |
0.1 |
| CB |
CG |
CD1 |
OE12 |
8.8 |
180.0 |
| CD2 |
CG |
CB |
HG |
116.9 |
240.1 |
| CB |
CG |
CD2 |
OE21 |
84.5 |
359.9 |
| CB |
CG |
CD2 |
OE22 |
263.6 |
180.0 |
| HB2 |
CB |
CA |
HA |
126.0 |
180.0 |
| CA |
CB |
HB2 |
CG |
227.5 |
239.9 |
| CA |
CB |
HB2 |
HB3 |
113.7 |
120.0 |
| CG |
CB |
HB2 |
HB3 |
246.2 |
240.1 |
| HB2 |
CB |
CG |
CD1 |
9.9 |
59.9 |
| HB2 |
CB |
CG |
CD2 |
242.6 |
180.0 |
| HB2 |
CB |
CG |
HG |
125.7 |
299.9 |
| HB3 |
CB |
CA |
HA |
235.5 |
299.9 |
| CA |
CB |
HB3 |
CG |
132.5 |
120.1 |
| CA |
CB |
HB3 |
HB2 |
246.2 |
240.0 |
| CG |
CB |
HB3 |
HB2 |
113.7 |
120.0 |
| HB3 |
CB |
CG |
CD1 |
260.4 |
300.0 |
| HB3 |
CB |
CG |
CD2 |
133.1 |
60.1 |
| HB3 |
CB |
CG |
HG |
16.2 |
180.0 |
| CD1 |
CG |
CB |
HB2 |
9.9 |
59.9 |
| CD1 |
CG |
CB |
HB3 |
260.4 |
300.0 |
| CB |
CG |
CD1 |
CD2 |
234.2 |
120.1 |
| CB |
CG |
CD1 |
HG |
117.6 |
240.0 |
| CD2 |
CG |
CD1 |
HG |
243.4 |
120.0 |
| CD1 |
CG |
CD2 |
OE21 |
318.0 |
120.0 |
| CD1 |
CG |
CD2 |
OE22 |
137.1 |
300.1 |
| OE11 |
CD1 |
CG |
OE12 |
178.9 |
180.2 |
| CG |
CD1 |
OE12 |
HE12 |
180.1 |
180.0 |
| CD2 |
CG |
CB |
HB2 |
242.6 |
180.0 |
| CD2 |
CG |
CB |
HB3 |
133.1 |
60.1 |
| CB |
CG |
CD2 |
CD1 |
126.5 |
239.9 |
| CB |
CG |
CD2 |
HG |
242.2 |
119.9 |
| CD1 |
CG |
CD2 |
HG |
115.7 |
240.0 |
| CD2 |
CG |
CD1 |
OE11 |
313.5 |
240.1 |
| CD2 |
CG |
CD1 |
OE12 |
134.7 |
59.9 |
| OE21 |
CD2 |
CG |
OE22 |
180.9 |
179.9 |
| CG |
CD2 |
OE22 |
HE22 |
180.0 |
180.0 |
| HG |
CG |
CB |
HB2 |
125.7 |
299.9 |
| HG |
CG |
CB |
HB3 |
16.2 |
180.0 |
| CB |
CG |
HG |
CD1 |
240.0 |
120.0 |
| CB |
CG |
HG |
CD2 |
119.3 |
240.1 |
| CD1 |
CG |
HG |
CD2 |
239.2 |
120.0 |
| HG |
CG |
CD1 |
OE11 |
70.1 |
120.1 |
| HG |
CG |
CD1 |
OE12 |
251.2 |
299.9 |
| HG |
CG |
CD2 |
OE21 |
202.3 |
240.0 |
| HG |
CG |
CD2 |
OE22 |
21.4 |
60.1 |
| OE11 |
CD1 |
CG |
CD2 |
313.5 |
240.1 |
| OE11 |
CD1 |
CG |
HG |
70.1 |
120.1 |
| CG |
CD1 |
OE11 |
OE12 |
181.1 |
179.8 |
| OE11 |
CD1 |
OE12 |
HE12 |
1.2 |
359.9 |
| OE12 |
CD1 |
CG |
CD2 |
134.7 |
59.9 |
| OE12 |
CD1 |
CG |
HG |
251.2 |
299.9 |
| CG |
CD1 |
OE12 |
OE11 |
178.8 |
180.2 |
| OE21 |
CD2 |
CG |
HG |
202.3 |
240.0 |
| CG |
CD2 |
OE21 |
OE22 |
179.1 |
180.1 |
| OE21 |
CD2 |
OE22 |
HE22 |
359.1 |
0.1 |
| OE22 |
CD2 |
CG |
HG |
21.4 |
60.1 |
| CG |
CD2 |
OE22 |
OE21 |
180.9 |
179.9 |