PDB Chemical Component CFU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CFU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
C3 |
1.512 |
1.501 |
| C2 |
S1 |
1.770 |
1.818 |
| O4A |
C4' |
1.242 |
1.214 |
| C3 |
C3' |
1.325 |
1.507 |
| C3 |
C4 |
1.470 |
1.313 |
| S1 |
C6 |
1.758 |
1.822 |
| C6 |
N5 |
1.451 |
1.469 |
| C6 |
C7 |
1.541 |
1.530 |
| C4 |
C4' |
1.340 |
1.475 |
| C4 |
N5 |
1.258 |
1.389 |
| C4' |
O4B |
1.237 |
1.348 |
| C7 |
C8 |
1.535 |
1.507 |
| C7 |
N10 |
1.479 |
1.466 |
| C8 |
O9 |
1.245 |
1.208 |
| N10 |
C11 |
1.339 |
1.347 |
| O12 |
C11 |
1.202 |
1.212 |
| C11 |
C13 |
1.519 |
1.508 |
| O4B |
H1 |
0.950 |
0.967 |
| C3' |
H3 |
1.100 |
1.090 |
| C3' |
H4 |
1.100 |
1.090 |
| C2 |
H5 |
1.100 |
1.090 |
| C2 |
H6 |
1.100 |
1.090 |
| N5 |
H7 |
1.000 |
0.970 |
| C6 |
H9 |
1.099 |
1.090 |
| C7 |
H10 |
1.100 |
1.090 |
| C8 |
H11 |
1.080 |
1.080 |
| N10 |
H12 |
1.000 |
0.970 |
| C13 |
H13 |
1.100 |
1.090 |
| C13 |
H14 |
1.100 |
1.090 |
| C13 |
H15 |
1.100 |
1.090 |
| C3' |
H2 |
1.100 |
1.090 |
Bond Angles for CFU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
S1 |
C6 |
101.5 |
101.2 |
| S1 |
C2 |
H5 |
109.2 |
109.5 |
| S1 |
C2 |
H6 |
109.2 |
109.5 |
| O4A |
C4' |
O4B |
122.4 |
120.0 |
| C3 |
C3' |
H3 |
109.5 |
109.5 |
| C3 |
C3' |
H4 |
109.4 |
109.5 |
| C3 |
C3' |
H2 |
109.5 |
109.5 |
| C3 |
C4 |
N5 |
116.8 |
127.3 |
| S1 |
C6 |
N5 |
106.7 |
107.3 |
| S1 |
C6 |
C7 |
112.1 |
110.0 |
| S1 |
C6 |
H9 |
108.4 |
109.9 |
| C6 |
N5 |
H7 |
105.4 |
119.5 |
| C6 |
C7 |
C8 |
109.6 |
109.5 |
| C6 |
C7 |
N10 |
103.9 |
109.5 |
| C7 |
C6 |
H9 |
111.2 |
110.0 |
| C6 |
C7 |
H10 |
108.6 |
109.5 |
| C4 |
N5 |
H7 |
105.4 |
119.5 |
| C4' |
O4B |
H1 |
109.5 |
117.0 |
| C8 |
C7 |
N10 |
116.2 |
109.4 |
| C7 |
C8 |
O9 |
120.2 |
120.0 |
| C8 |
C7 |
H10 |
108.7 |
109.5 |
| C7 |
C8 |
H11 |
119.9 |
119.9 |
| C7 |
N10 |
C11 |
125.6 |
120.0 |
| N10 |
C7 |
H10 |
109.5 |
109.5 |
| C7 |
N10 |
H12 |
117.2 |
119.9 |
| O9 |
C8 |
H11 |
119.9 |
120.0 |
| N10 |
C11 |
C13 |
119.1 |
120.0 |
| C11 |
N10 |
H12 |
117.2 |
120.1 |
| O12 |
C11 |
C13 |
121.9 |
120.0 |
| C11 |
C13 |
H13 |
109.5 |
109.4 |
| C11 |
C13 |
H14 |
109.5 |
109.4 |
| C11 |
C13 |
H15 |
109.5 |
109.5 |
| H3 |
C3' |
H4 |
109.5 |
109.4 |
| H3 |
C3' |
H2 |
109.5 |
109.4 |
| H4 |
C3' |
H2 |
109.5 |
109.5 |
| H5 |
C2 |
H6 |
109.5 |
109.5 |
| H13 |
C13 |
H14 |
109.5 |
109.5 |
| H13 |
C13 |
H15 |
109.5 |
109.5 |
| H14 |
C13 |
H15 |
109.5 |
109.5 |
Torsion Angles for CFU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C3 |
C3' |
H3 |
180.0 |
264.7 |
| C2 |
C3 |
C3' |
H4 |
300.0 |
24.6 |
| C2 |
C3 |
C3' |
H2 |
60.0 |
144.7 |
| C2 |
C3 |
C4 |
N5 |
322.3 |
359.4 |
| C2 |
S1 |
C6 |
N5 |
51.9 |
56.1 |
| C2 |
S1 |
C6 |
C7 |
167.3 |
175.7 |
| C2 |
S1 |
C6 |
H9 |
290.4 |
296.9 |
| H5 |
C2 |
S1 |
H6 |
119.7 |
120.0 |
| O4A |
C4' |
O4B |
H1 |
360.0 |
360.0 |
| C3' |
C3 |
C4 |
N5 |
140.5 |
179.4 |
| H3 |
C3' |
C3 |
H4 |
240.0 |
240.0 |
| H3 |
C3' |
C3 |
H2 |
120.0 |
120.0 |
| H4 |
C3' |
C3 |
H2 |
240.0 |
239.9 |
| C3 |
C4 |
N5 |
H7 |
287.1 |
194.5 |
| C6 |
S1 |
C2 |
H5 |
192.3 |
194.8 |
| C6 |
S1 |
C2 |
H6 |
72.6 |
74.8 |
| S1 |
C6 |
N5 |
H7 |
62.4 |
135.5 |
| S1 |
C6 |
C7 |
C8 |
180.4 |
300.0 |
| S1 |
C6 |
C7 |
N10 |
305.2 |
60.0 |
| C7 |
C6 |
S1 |
H9 |
236.9 |
238.8 |
| S1 |
C6 |
C7 |
H10 |
61.7 |
180.0 |
| S1 |
C6 |
N5 |
C7 |
119.5 |
119.6 |
| S1 |
C6 |
N5 |
H9 |
241.2 |
240.6 |
| C4 |
N5 |
C6 |
H7 |
237.9 |
180.2 |
| S1 |
C6 |
C7 |
N5 |
244.1 |
242.1 |
| S1 |
C6 |
C7 |
H9 |
121.5 |
121.2 |
| C7 |
C6 |
N5 |
H7 |
302.9 |
15.9 |
| C8 |
C7 |
C6 |
N10 |
235.2 |
240.0 |
| C6 |
C7 |
C8 |
O9 |
78.1 |
120.0 |
| C8 |
C7 |
C6 |
H10 |
118.7 |
120.0 |
| C6 |
C7 |
C8 |
H11 |
258.1 |
300.0 |
| C6 |
C7 |
N10 |
C11 |
125.8 |
155.0 |
| N10 |
C7 |
C6 |
H10 |
243.5 |
240.0 |
| C6 |
C7 |
N10 |
H12 |
305.8 |
335.0 |
| C4 |
C4' |
O4B |
H1 |
181.5 |
180.2 |
| S1 |
C6 |
N5 |
C4 |
300.3 |
315.7 |
| C6 |
N5 |
C4 |
H7 |
122.1 |
179.8 |
| C6 |
C7 |
C8 |
N10 |
117.3 |
120.0 |
| C8 |
C7 |
C6 |
H9 |
58.8 |
178.9 |
| C6 |
C7 |
C8 |
H10 |
241.4 |
239.9 |
| C8 |
C7 |
N10 |
C11 |
246.3 |
275.0 |
| N10 |
C7 |
C8 |
H10 |
124.1 |
120.0 |
| C8 |
C7 |
N10 |
H12 |
66.3 |
95.0 |
| O9 |
C8 |
C7 |
H11 |
180.0 |
180.0 |
| C6 |
C7 |
N10 |
C8 |
239.6 |
240.0 |
| N10 |
C7 |
C6 |
H9 |
183.7 |
298.8 |
| C6 |
C7 |
N10 |
H10 |
115.9 |
120.1 |
| N10 |
C7 |
C8 |
O9 |
320.8 |
0.0 |
| C8 |
C7 |
N10 |
H10 |
236.3 |
240.0 |
| N10 |
C7 |
C8 |
H11 |
140.8 |
180.0 |
| C7 |
N10 |
C11 |
C13 |
182.3 |
180.0 |
| C11 |
N10 |
C7 |
H12 |
180.0 |
180.0 |
| O9 |
C8 |
C7 |
N10 |
320.8 |
0.0 |
| O9 |
C8 |
C7 |
H10 |
196.8 |
240.1 |
| C7 |
C8 |
O9 |
H11 |
180.0 |
180.0 |
| C11 |
N10 |
C7 |
H10 |
9.9 |
34.9 |
| C7 |
N10 |
C11 |
H12 |
180.0 |
180.0 |
| O12 |
C11 |
N10 |
C13 |
179.0 |
180.1 |
| N10 |
C11 |
C13 |
H13 |
179.0 |
0.1 |
| N10 |
C11 |
C13 |
H14 |
299.0 |
120.1 |
| N10 |
C11 |
C13 |
H15 |
59.0 |
240.1 |
| N10 |
C11 |
O12 |
C13 |
181.0 |
179.9 |
| O12 |
C11 |
N10 |
H12 |
181.3 |
180.1 |
| O12 |
C11 |
C13 |
H13 |
0.0 |
179.9 |
| O12 |
C11 |
C13 |
H14 |
120.0 |
299.9 |
| O12 |
C11 |
C13 |
H15 |
240.0 |
59.9 |
| C13 |
C11 |
N10 |
H12 |
2.3 |
359.9 |
| H13 |
C13 |
C11 |
H14 |
240.0 |
240.0 |
| H13 |
C13 |
C11 |
H15 |
120.0 |
120.0 |
| H14 |
C13 |
C11 |
H15 |
240.0 |
240.0 |
| C3 |
C3' |
H3 |
H4 |
120.0 |
120.0 |
| C3 |
C3' |
H3 |
H2 |
240.0 |
240.0 |
| H4 |
C3' |
H3 |
H2 |
120.0 |
120.0 |
| C3 |
C3' |
H4 |
H3 |
240.0 |
240.0 |
| C3 |
C3' |
H4 |
H2 |
120.0 |
120.0 |
| H3 |
C3' |
H4 |
H2 |
240.0 |
240.0 |
| H5 |
C2 |
S1 |
C6 |
192.3 |
194.8 |
| S1 |
C2 |
H5 |
H6 |
240.5 |
240.0 |
| H6 |
C2 |
S1 |
C6 |
72.6 |
74.8 |
| S1 |
C2 |
H6 |
H5 |
119.5 |
120.0 |
| S1 |
C6 |
H9 |
N5 |
117.8 |
117.7 |
| S1 |
C6 |
H9 |
C7 |
236.4 |
238.8 |
| H9 |
C6 |
N5 |
H7 |
181.2 |
254.8 |
| H9 |
C6 |
C7 |
C8 |
58.8 |
178.9 |
| H9 |
C6 |
C7 |
N10 |
183.7 |
298.8 |
| H9 |
C6 |
C7 |
H10 |
300.2 |
58.8 |
| C6 |
C7 |
H10 |
C8 |
119.2 |
120.0 |
| C6 |
C7 |
H10 |
N10 |
247.2 |
240.0 |
| H10 |
C7 |
C6 |
H9 |
300.2 |
58.8 |
| C8 |
C7 |
H10 |
N10 |
127.9 |
119.9 |
| H10 |
C7 |
C8 |
O9 |
196.8 |
240.1 |
| H10 |
C7 |
C8 |
H11 |
16.8 |
60.0 |
| H10 |
C7 |
N10 |
C11 |
9.9 |
34.9 |
| H10 |
C7 |
N10 |
H12 |
189.9 |
215.0 |
| H11 |
C8 |
C7 |
N10 |
140.8 |
180.0 |
| C7 |
C8 |
H11 |
O9 |
180.0 |
180.0 |
| H11 |
C8 |
C7 |
H10 |
16.8 |
60.0 |
| C7 |
N10 |
H12 |
C11 |
180.0 |
180.0 |
| H12 |
N10 |
C7 |
H10 |
189.9 |
215.0 |
| H12 |
N10 |
C11 |
C13 |
2.3 |
359.9 |
| C11 |
C13 |
H13 |
H14 |
120.0 |
119.9 |
| C11 |
C13 |
H13 |
H15 |
240.0 |
240.0 |
| H14 |
C13 |
H13 |
H15 |
120.0 |
120.0 |
| C11 |
C13 |
H14 |
H13 |
240.0 |
240.0 |
| C11 |
C13 |
H14 |
H15 |
120.0 |
120.0 |
| H13 |
C13 |
H14 |
H15 |
240.0 |
240.0 |
| C11 |
C13 |
H15 |
H13 |
120.0 |
120.0 |
| C11 |
C13 |
H15 |
H14 |
240.0 |
240.1 |
| H13 |
C13 |
H15 |
H14 |
120.0 |
120.1 |
| C3 |
C3' |
H2 |
H3 |
120.0 |
120.0 |
| C3 |
C3' |
H2 |
H4 |
240.0 |
240.0 |
| H3 |
C3' |
H2 |
H4 |
120.0 |
120.0 |