PDB Chemical Component CEW

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CEW

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
S1 C2 1.700 1.819
S1 C6 1.823 1.822
C2 C3 1.387 1.501
C3 C3' 1.384 1.507
C3 C4 1.381 1.313
C4 C4' 1.500 1.475
C4 N5 1.323 1.389
C4' O4A 1.227 1.215
C4' O4B 1.228 1.347
N5 C6 1.466 1.470
C6 C7 1.543 1.530
C7 C8 1.531 1.508
C7 N10 1.452 1.465
C8 O9 1.230 1.207
N10 C11 1.332 1.347
C11 O12 1.234 1.216
C11 C13 1.540 1.482
C13 N16 1.304 1.308
C13 C14 1.385 1.470
N16 O17 1.432 1.416
O17 C18 1.427 1.429
C14 C15 1.336 1.335
C14 N19 1.349 1.383
C15 S16 1.665 1.771
S16 C17 1.631 1.822
C17 N18 1.314 1.469
C17 N19 1.332 1.468
C2 H2 1.100 1.090
C2 H2A 1.100 1.090
C3' H3' 1.100 1.090
C3' H3'A 1.100 1.090
C3' H3'B 1.100 1.090
O4B HO4B 0.950 0.967
N5 HN5 1.000 0.970
C6 H6 1.100 1.090
C7 H7 1.100 1.090
C8 H8 1.080 1.080
N10 HN10 1.000 0.970
C18 H18 1.100 1.090
C18 H18A 1.100 1.090
C18 H18B 1.100 1.090
C15 H15 1.080 1.081
C17 H17 1.100 1.090
N18 HN18 1.000 1.010
N18 HN1A 1.000 1.009
N19 HN19 1.000 0.971

Bond Angles for CEW

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 S1 C6 107.6 101.2
S1 C2 C3 122.6 109.4
S1 C2 H2 105.3 109.5
S1 C2 H2A 102.2 109.5
S1 C6 N5 112.0 107.1
S1 C6 C7 119.0 109.9
S1 C6 H6 99.0 109.9
C2 C3 C3' 120.8 117.2
C2 C3 C4 122.7 125.6
C3 C2 H2 105.3 109.5
C3 C2 H2A 102.2 109.5
C3' C3 C4 116.5 117.2
C3 C3' H3' 109.5 109.5
C3 C3' H3'A 109.5 109.5
C3 C3' H3'B 109.5 109.4
C3 C4 C4' 118.0 116.4
C3 C4 N5 125.5 127.3
C4' C4 N5 116.3 116.4
C4 C4' O4A 118.6 120.0
C4 C4' O4B 117.9 120.0
C4 N5 C6 129.3 120.9
C4 N5 HN5 103.3 119.6
O4A C4' O4B 123.5 120.0
C4' O4B HO4B 109.5 117.0
N5 C6 C7 103.9 109.9
C6 N5 HN5 103.3 119.5
N5 C6 H6 115.5 110.0
C6 C7 C8 113.5 109.5
C6 C7 N10 103.2 109.5
C7 C6 H6 107.9 110.0
C6 C7 H7 111.2 109.5
C8 C7 N10 109.9 109.4
C7 C8 O9 123.7 120.0
C8 C7 H7 104.6 109.4
C7 C8 H8 118.1 120.0
C7 N10 C11 126.3 120.0
N10 C7 H7 114.7 109.5
C7 N10 HN10 116.9 120.0
O9 C8 H8 118.1 120.0
N10 C11 O12 122.5 120.0
N10 C11 C13 120.6 120.0
C11 N10 HN10 116.8 120.0
O12 C11 C13 116.9 119.9
C11 C13 N16 116.7 120.0
C11 C13 C14 131.6 120.0
N16 C13 C14 111.7 120.0
C13 N16 O17 103.7 120.0
C13 C14 C15 116.3 120.2
C13 C14 N19 129.8 120.2
N16 O17 C18 109.9 114.0
O17 C18 H18 109.5 109.5
O17 C18 H18A 109.5 109.5
O17 C18 H18B 109.5 109.5
C15 C14 N19 113.8 119.6
C14 C15 S16 108.2 107.6
C14 C15 H15 125.9 126.2
C14 N19 C17 113.8 114.1
C14 N19 HN19 108.0 122.9
C15 S16 C17 94.8 94.9
S16 C15 H15 125.9 126.2
S16 C17 N18 124.1 110.6
S16 C17 N19 109.4 103.9
S16 C17 H17 133.1 110.6
N18 C17 N19 126.5 110.7
N18 C17 H17 9.2 110.5
C17 N18 HN18 109.5 111.0
C17 N18 HN1A 109.4 111.0
N19 C17 H17 117.4 110.4
C17 N19 HN19 108.0 123.0
H2 C2 H2A 120.5 109.5
H3' C3' H3'A 109.5 109.5
H3' C3' H3'B 109.4 109.4
H3'A C3' H3'B 109.4 109.5
H18 C18 H18A 109.5 109.4
H18 C18 H18B 109.4 109.5
H18A C18 H18B 109.5 109.4
HN18 N18 HN1A 109.4 110.9

Torsion Angles for CEW

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 S1 C6 N5 3.7 56.3
C2 S1 C6 C7 125.1 175.7
C2 S1 C6 H6 241.4 296.8
S1 C2 C3 C3' 182.5 201.3
S1 C2 C3 C4 0.8 21.3
C3 C2 S1 H2 240.0 240.0
C3 C2 S1 H2A 113.3 120.0
H2 C2 S1 H2A 233.3 240.0
C6 S1 C2 C3 357.6 314.9
C6 S1 C2 H2 117.5 74.9
C6 S1 C2 H2A 244.3 194.9
C4 N5 C6 S1 355.8 315.2
N5 C6 S1 C7 238.6 240.6
S1 C6 N5 HN5 235.8 135.3
N5 C6 S1 H6 122.3 119.5
S1 C6 C7 C8 61.4 300.0
S1 C6 C7 N10 180.3 60.0
C7 C6 S1 H6 243.7 238.9
S1 C6 C7 H7 303.7 180.0
C3 C2 S1 C6 357.6 314.9
S1 C2 C3 H2 120.0 120.0
S1 C2 C3 H2A 246.7 240.0
C3' C3 C2 C4 181.7 180.0
C2 C3 C3' H3' 314.2 360.0
C2 C3 C3' H3'A 74.2 120.0
C2 C3 C3' H3'B 194.2 240.0
C2 C3 C4 C4' 184.0 179.2
C2 C3 C4 N5 359.6 359.1
H2 C2 C3 H2A 126.7 120.1
C2 C3 C3' C4 178.4 180.0
C3' C3 C2 H2 62.5 81.3
C3' C3 C2 H2A 295.8 321.2
C3' C3 C4 C4' 2.3 359.2
C3' C3 C4 N5 177.9 179.1
H3' C3' C3 H3'A 239.9 239.9
H3' C3' C3 H3'B 120.0 119.9
H3'A C3' C3 H3'B 240.0 240.0
C2 C3 C4 C3' 181.6 180.0
C4 C3 C2 H2 240.8 261.3
C4 C3 C2 H2A 114.1 141.2
C4 C3 C3' H3' 135.8 180.0
C4 C3 C3' H3'A 255.8 300.0
C4 C3 C3' H3'B 15.8 60.0
C4' C4 C3 N5 184.4 180.1
C3 C4 C4' O4A 177.9 353.8
C3 C4 C4' O4B 356.8 173.9
C3 C4 N5 C6 2.6 14.9
C3 C4 N5 HN5 122.6 194.8
C3 C4 C4' N5 176.0 179.9
C4' C4 N5 C6 178.3 194.8
C4' C4 N5 HN5 298.2 14.7
O4A C4' C4 O4B 181.1 179.9
C4 C4' O4B HO4B 181.1 179.9
S1 C6 N5 C4 355.8 315.2
C3 C4 N5 C4' 184.3 180.1
N5 C4 C4' O4A 1.9 173.9
N5 C4 C4' O4B 180.8 354.0
C4 N5 C6 C7 226.0 195.8
C6 N5 C4 HN5 240.0 180.1
C4 N5 C6 H6 108.1 74.6
O4A C4' C4 N5 1.9 173.9
C4 C4' O4A O4B 178.8 180.1
O4A C4' O4B HO4B 360.0 0.0
O4B C4' C4 N5 180.8 354.0
C4 C4' O4B O4A 181.2 179.9
S1 C6 N5 C7 129.8 119.4
S1 C6 N5 H6 247.7 240.6
C4 N5 C6 HN5 120.0 179.9
N5 C6 C7 C8 186.8 57.7
N5 C6 C7 N10 305.7 177.7
C7 C6 N5 H6 117.9 121.2
N5 C6 C7 H7 69.2 297.7
S1 C6 C7 N5 234.6 242.3
S1 C6 C7 H6 111.5 121.1
C7 C6 N5 HN5 106.0 15.9
N5 C6 C7 H6 237.0 238.8
C8 C7 C6 N10 241.1 240.0
C6 C7 C8 O9 213.8 120.0
C8 C7 C6 H7 117.6 120.0
C6 C7 C8 H8 33.8 300.0
C6 C7 N10 C11 164.7 155.0
N10 C7 C6 H7 236.6 240.0
C6 C7 N10 HN10 344.7 335.0
C6 C7 C8 N10 115.0 120.0
C8 C7 C6 H6 309.8 178.9
C6 C7 C8 H7 238.6 240.0
C8 C7 N10 C11 286.1 275.0
N10 C7 C8 H7 123.6 120.0
C8 C7 N10 HN10 106.1 95.0
O9 C8 C7 H8 180.0 180.0
C6 C7 N10 C8 238.6 240.0
N10 C7 C6 H6 68.8 298.9
C6 C7 N10 H7 121.1 120.1
N10 C7 C8 O9 98.8 0.0
C8 C7 N10 H7 242.5 240.0
N10 C7 C8 H8 278.8 180.0
C7 N10 C11 O12 179.7 0.0
C7 N10 C11 C13 358.4 180.0
C11 N10 C7 HN10 180.0 180.0
O9 C8 C7 N10 98.8 0.0
O9 C8 C7 H7 335.1 240.0
C7 C8 O9 H8 180.0 180.0
C11 N10 C7 H7 43.6 34.9
C7 N10 C11 HN10 180.0 180.0
O12 C11 N10 C13 181.2 180.0
N10 C11 C13 N16 181.2 4.8
N10 C11 C13 C14 2.9 184.8
N10 C11 O12 C13 178.8 180.0
O12 C11 N10 HN10 359.7 180.0
O12 C11 C13 N16 0.1 184.8
O12 C11 C13 C14 181.7 4.8
N10 C11 C13 O12 181.2 180.0
C13 C11 N10 HN10 178.4 360.0
N16 C13 C11 C14 178.4 180.1
C11 C13 N16 O17 140.6 184.1
C11 C13 C14 C15 153.0 144.1
C11 C13 C14 N19 330.8 323.9
C11 C13 N16 C14 181.3 179.9
N16 C13 C14 C15 334.6 324.1
N16 C13 C14 N19 152.4 143.8
C13 N16 O17 C18 159.7 180.0
C11 C13 C14 N16 178.4 180.1
C14 C13 N16 O17 319.3 4.2
C15 C14 C13 N19 182.3 180.2
C13 C14 C15 S16 179.2 180.0
C13 C14 C15 H15 359.2 0.0
C13 C14 N19 C17 180.9 179.7
C13 C14 N19 HN19 300.8 359.9
O17 N16 C13 C14 319.3 4.2
N16 O17 C18 H18 173.1 300.0
N16 O17 C18 H18A 293.1 60.0
N16 O17 C18 H18B 53.2 180.0
H18 C18 O17 H18A 240.0 240.0
H18 C18 O17 H18B 120.0 120.0
H18A C18 O17 H18B 240.0 240.0
C13 C14 C15 N19 178.1 179.8
C15 C14 N19 C17 358.7 359.5
C15 C14 N19 HN19 118.6 179.7
C14 C15 S16 C17 359.5 0.0
S16 C15 C14 H15 180.0 180.0
C13 C14 N19 C15 182.2 180.2
N19 C14 C15 S16 1.1 0.3
N19 C14 C15 H15 181.0 180.3
S16 C17 N19 C14 0.9 0.4
N18 C17 N19 C14 181.1 241.7
C14 N19 C17 H17 179.8 119.0
C17 N19 C14 HN19 240.0 179.8
S16 C15 C14 N19 1.1 0.3
C14 C15 S16 H15 180.0 180.0
C15 S16 C17 N18 179.6 118.6
C15 S16 C17 N19 359.8 359.8
C15 S16 C17 H17 181.1 241.3
C14 N19 C17 S16 0.9 0.4
C17 S16 C15 H15 179.6 180.0
N18 C17 S16 N19 179.8 118.8
N18 C17 S16 H17 358.4 237.3
S16 C17 N18 HN18 250.3 61.5
S16 C17 N18 HN1A 10.2 185.4
N19 C17 S16 H17 178.6 118.5
S16 C17 N19 HN19 240.9 180.2
C14 N19 C17 N18 181.1 241.7
S16 C17 N18 N19 180.2 245.5
S16 C17 N18 H17 172.7 122.8
N19 C17 N18 H17 352.5 237.3
N18 C17 N19 HN19 61.1 61.5
HN18 N18 C17 HN1A 240.0 236.2
C14 N19 C17 HN19 120.0 180.2
S16 C17 N19 N18 179.8 118.7
S16 C17 N19 H17 181.1 241.4
N18 C17 N19 H17 1.3 122.8
N19 C17 N18 HN18 70.0 176.1
N19 C17 N18 HN1A 190.0 299.9
H2 C2 S1 C6 117.5 74.9
S1 C2 H2 C3 229.1 240.1
S1 C2 H2 H2A 114.6 120.0
H2 C2 C3 C3' 62.5 81.3
H2 C2 C3 C4 240.8 261.3
C3 C2 H2 H2A 245.4 239.9
H2A C2 S1 C6 244.3 194.9
S1 C2 H2A C3 127.7 119.9
S1 C2 H2A H2 243.8 240.0
H2A C2 C3 C3' 295.8 321.2
H2A C2 C3 C4 114.1 141.2
C3 C2 H2A H2 116.1 120.1
H3' C3' C3 C4 135.8 180.0
C3 C3' H3' H3'A 120.0 120.0
C3 C3' H3' H3'B 240.0 240.1
H3'A C3' H3' H3'B 120.0 120.0
H3'A C3' C3 C4 255.8 300.0
C3 C3' H3'A H3' 240.0 240.0
C3 C3' H3'A H3'B 120.0 120.0
H3' C3' H3'A H3'B 240.0 240.0
H3'B C3' C3 C4 15.8 60.0
C3 C3' H3'B H3' 120.0 119.9
C3 C3' H3'B H3'A 240.0 240.0
H3' C3' H3'B H3'A 120.0 120.1
C4 N5 HN5 C6 223.5 180.1
HN5 N5 C6 C7 106.0 15.9
HN5 N5 C6 H6 348.1 254.7
S1 C6 H6 N5 119.8 117.7
S1 C6 H6 C7 235.4 238.9
N5 C6 H6 C7 115.7 121.2
H6 C6 N5 HN5 348.1 254.7
H6 C6 C7 C8 309.8 178.9
H6 C6 C7 N10 68.8 298.9
H6 C6 C7 H7 192.2 58.9
C6 C7 H7 C8 122.9 120.0
C6 C7 H7 N10 243.4 239.9
H7 C7 C6 H6 192.2 58.9
C8 C7 H7 N10 120.5 120.0
H7 C7 C8 O9 335.1 240.0
H7 C7 C8 H8 155.2 60.0
H7 C7 N10 C11 43.6 34.9
H7 C7 N10 HN10 223.6 215.0
H8 C8 C7 N10 278.8 180.0
C7 C8 H8 O9 180.0 180.0
H8 C8 C7 H7 155.2 60.0
C7 N10 HN10 C11 180.0 180.0
HN10 N10 C7 H7 223.6 215.0
HN10 N10 C11 O12 359.7 180.0
HN10 N10 C11 C13 178.4 360.0
O17 C18 H18 H18A 120.0 120.0
O17 C18 H18 H18B 240.0 240.0
H18A C18 H18 H18B 120.0 119.9
O17 C18 H18A H18 240.0 240.0
O17 C18 H18A H18B 120.0 120.0
H18 C18 H18A H18B 240.0 240.1
O17 C18 H18B H18 120.0 120.0
O17 C18 H18B H18A 240.0 240.0
H18 C18 H18B H18A 120.0 119.9
H15 C15 C14 N19 181.0 180.3
C14 C15 H15 S16 180.0 180.0
H15 C15 S16 C17 179.6 180.0
S16 C17 H17 N18 351.8 237.2
S16 C17 H17 N19 178.5 114.4
N18 C17 H17 N19 186.8 237.1
H17 C17 N18 HN18 77.5 298.8
H17 C17 N18 HN1A 197.5 62.6
H17 C17 N19 HN19 59.8 298.8
HN18 N18 C17 N19 70.0 176.1
HN18 N18 C17 H17 77.5 298.8
C17 N18 HN18 HN1A 120.0 123.9
HN1A N18 C17 N19 190.0 299.9
HN1A N18 C17 H17 197.5 62.6
C17 N18 HN1A HN18 240.0 236.1
C14 N19 HN19 C17 236.5 179.8
HN19 N19 C17 H17 59.8 298.8