PDB Chemical Component CCV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CCV

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C1	1.345	1.345
N1	C5	1.361	1.368
N1	H1	1.019	0.970
O1	C1	1.221	1.216
O2	C2	1.220	1.218
N2	C1	1.353	1.345
N2	C2	1.346	1.348
N2	H2	1.020	0.970
C2	C3	1.483	1.415
C3	C4	1.517	1.507
C3	C5	1.343	1.351
C4	H43	1.114	1.089
C4	H42	1.115	1.091
C4	H41	1.115	1.089
C5	C11	1.533	1.506
C11	C12	1.571	1.529
C11	H112	1.114	1.090
C11	H111	1.114	1.089
C12	C13	1.555	1.530
C12	C14	1.545	1.529
C12	H12	1.115	1.090
C13	O3	1.439	1.428
C13	H132	1.115	1.090
C13	H131	1.115	1.090
C14	O4	1.443	1.428
C14	H142	1.115	1.090
C14	H141	1.115	1.090
O3	H3	0.949	0.967
O4	H4	0.949	0.966

Bond Angles for CCV

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C1	N1	C5	124.1	120.6
C1	N1	H1	107.0	119.7
N1	C1	O1	120.4	119.5
N1	C1	N2	119.7	120.9
C5	N1	H1	107.1	119.7
N1	C5	C3	118.1	119.6
N1	C5	C11	117.5	120.2
O1	C1	N2	119.9	119.5
O2	C2	N2	121.4	120.3
O2	C2	C3	119.9	120.3
C1	N2	C2	120.5	120.3
C1	N2	H2	120.0	119.9
C2	N2	H2	119.5	119.9
N2	C2	C3	118.7	119.4
C2	C3	C4	117.5	120.5
C2	C3	C5	118.9	119.1
C4	C3	C5	123.6	120.4
C3	C4	H43	117.5	109.5
C3	C4	H42	109.3	109.4
C3	C4	H41	109.3	109.5
C3	C5	C11	124.4	120.2
H43	C4	H42	109.4	109.4
H43	C4	H41	109.3	109.5
H42	C4	H41	100.8	109.5
C5	C11	C12	117.2	109.4
C5	C11	H112	109.4	109.5
C5	C11	H111	109.4	109.5
C12	C11	H112	109.4	109.4
C12	C11	H111	109.4	109.5
C11	C12	C13	111.0	109.5
C11	C12	C14	112.4	109.5
C11	C12	H12	107.1	109.5
H112	C11	H111	100.8	109.5
C13	C12	C14	111.5	109.4
C13	C12	H12	108.0	109.4
C12	C13	O3	113.8	109.5
C12	C13	H132	110.6	109.4
C12	C13	H131	110.6	109.4
C14	C12	H12	106.5	109.4
C12	C14	O4	112.6	109.5
C12	C14	H142	111.0	109.5
C12	C14	H141	111.0	109.5
O3	C13	H132	110.6	109.5
O3	C13	H131	110.7	109.5
C13	O3	H3	113.8	106.8
H132	C13	H131	99.7	109.4
O4	C14	H142	111.0	109.5
O4	C14	H141	111.0	109.4
C14	O4	H4	112.7	106.9
H142	C14	H141	99.3	109.4

Torsion Angles for CCV

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C5	N1	C1	H1	125.3	179.9
C1	N1	C5	C3	359.6	0.1
C1	N1	C5	C11	179.2	180.0
O1	C1	N1	N2	179.7	180.2
N1	C1	N2	C2	359.8	359.8
N1	C1	N2	H2	179.7	180.0
C1	N1	C5	H1	234.8	180.1
C5	N1	C1	O1	180.2	180.0
C5	N1	C1	N2	0.5	359.9
C2	C3	C5	N1	0.1	0.3
C4	C3	C5	N1	180.2	179.9
C3	C5	N1	C11	180.4	180.1
N1	C5	C11	C12	301.2	88.9
N1	C5	C11	H112	66.5	208.8
N1	C5	C11	H111	176.0	328.9
C1	N1	H1	C5	135.0	179.9
H1	N1	C1	O1	54.9	0.1
H1	N1	C1	N2	235.2	179.9
H1	N1	C5	C3	124.8	180.0
H1	N1	C5	C11	304.4	359.9
O1	C1	N1	C5	180.2	180.0
O1	C1	N1	H1	54.9	0.1
N1	C1	O1	N2	180.3	179.8
O1	C1	N2	C2	180.1	179.7
O1	C1	N2	H2	0.1	359.9
C1	N2	C2	O2	179.9	180.0
O2	C2	N2	H2	359.9	359.8
N2	C2	O2	C3	180.0	180.5
O2	C2	C3	C4	0.1	0.3
O2	C2	C3	C5	180.2	180.0
N2	C1	N1	C5	0.5	359.9
N2	C1	N1	H1	235.2	179.9
N1	C1	N2	O1	179.7	180.2
O2	C2	N2	C1	179.9	180.0
C2	N2	C1	H2	180.0	179.8
C1	N2	C2	C3	359.9	0.5
O2	C2	N2	C3	180.0	179.5
C1	N2	C2	H2	180.0	180.2
N2	C2	C3	C4	180.1	179.8
N2	C2	C3	C5	0.2	359.4
C1	N2	H2	C2	180.0	179.8
H2	N2	C2	C3	179.9	180.3
N1	C5	C3	C2	0.1	0.3
O2	C2	C3	N2	180.0	180.5
C3	C2	N2	H2	179.9	180.3
C4	C3	C2	C5	179.9	180.3
C2	C3	C4	H43	180.0	354.8
C2	C3	C4	H42	305.3	114.7
C2	C3	C4	H41	54.7	234.7
C2	C3	C5	C11	180.5	180.4
N1	C5	C3	C4	180.2	179.9
C2	C3	C4	C5	180.1	179.7
C4	C3	C5	C11	0.6	0.1
H43	C4	C3	H42	234.7	240.1
H43	C4	C3	H41	125.3	120.1
H42	C4	C3	H41	250.5	240.0
C3	C5	N1	H1	124.8	180.0
N1	C5	C3	C11	179.6	179.9
C2	C3	C5	C4	179.9	180.3
C5	C3	C4	H43	359.9	175.1
C5	C3	C4	H42	125.2	295.1
C5	C3	C4	H41	234.7	55.0
C3	C5	C11	C12	120.8	268.8
C3	C5	C11	H112	246.0	28.7
C3	C5	C11	H111	355.5	148.8
H43	C4	C3	C5	359.9	175.1
C3	C4	H43	H42	125.2	119.9
C3	C4	H43	H41	234.7	240.0
H42	C4	H43	H41	109.5	120.0
H42	C4	C3	C5	125.2	295.1
C3	C4	H42	H43	230.2	240.0
C3	C4	H42	H41	115.0	120.0
H43	C4	H42	H41	244.9	239.9
H41	C4	C3	C5	234.7	55.0
C3	C4	H41	H43	129.9	120.1
C3	C4	H41	H42	245.0	240.1
H43	C4	H41	H42	115.1	120.0
C11	C5	N1	H1	304.4	359.9
N1	C5	C11	C3	180.4	180.1
C12	C11	C5	H112	234.8	240.0
C12	C11	C5	H111	125.3	120.0
C5	C11	C12	C13	230.0	174.6
C5	C11	C12	C14	104.3	294.6
C5	C11	C12	H12	347.7	54.6
H112	C11	C5	H111	250.5	240.0
C5	C11	C12	H112	125.2	120.0
C5	C11	C12	H111	234.8	240.0
H112	C11	C12	H111	109.5	120.0
C13	C12	C11	C14	125.7	240.0
C13	C12	C11	H12	242.3	120.0
C11	C12	C13	O3	311.7	180.0
C11	C12	C13	H132	77.0	300.0
C11	C12	C13	H131	186.5	59.9
C14	C12	C11	H12	116.6	240.0
C11	C12	C14	O4	312.2	299.9
C11	C12	C14	H142	77.5	59.9
C11	C12	C14	H141	186.9	179.9
C5	C11	H112	C12	230.4	240.0
C5	C11	H112	H111	115.2	120.1
C12	C11	H112	H111	244.8	240.0
H112	C11	C12	C13	104.7	54.6
H112	C11	C12	C14	339.1	174.6
H112	C11	C12	H12	222.4	294.6
C5	C11	H111	C12	129.6	120.0
C5	C11	H111	H112	244.8	239.9
C12	C11	H111	H112	115.2	119.9
H111	C11	C12	C13	355.2	294.7
H111	C11	C12	C14	229.5	54.7
H111	C11	C12	H12	112.9	174.7
C13	C12	C11	H112	104.7	54.6
C13	C12	C11	H111	355.2	294.7
C11	C12	C13	C14	233.8	120.0
C11	C12	C13	H12	117.1	239.9
C14	C12	C13	H12	243.3	119.9
C13	C12	C14	O4	186.8	60.0
C13	C12	C14	H142	312.1	180.0
C13	C12	C14	H141	61.6	300.0
O3	C13	C12	H132	234.8	239.9
O3	C13	C12	H131	125.3	120.0
C12	C13	O3	H3	180.0	180.0
H132	C13	C12	H131	250.5	240.1
C14	C12	C11	H112	339.1	174.6
C14	C12	C11	H111	229.5	54.7
C11	C12	C14	C13	125.4	239.9
C11	C12	C14	H12	243.0	120.0
C13	C12	C14	H12	117.6	240.1
C14	C12	C13	O3	77.9	59.9
C14	C12	C13	H132	203.1	180.0
C14	C12	C13	H131	312.6	299.9
O4	C14	C12	H142	234.7	240.0
O4	C14	C12	H141	125.2	120.0
C12	C14	O4	H4	180.0	184.9
H142	C14	C12	H141	250.5	240.0
H12	C12	C11	H112	222.4	294.6
H12	C12	C11	H111	112.9	174.7
C11	C12	H12	C13	240.4	120.1
C11	C12	H12	C14	120.4	240.0
C13	C12	H12	C14	240.1	119.9
H12	C12	C13	O3	194.6	300.0
H12	C12	C13	H132	319.8	60.1
H12	C12	C13	H131	69.3	180.0
H12	C12	C14	O4	69.2	179.9
H12	C12	C14	H142	194.4	299.9
H12	C12	C14	H141	303.9	59.9
O3	C13	C12	C14	77.9	59.9
O3	C13	C12	H12	194.6	300.0
C12	C13	O3	H132	125.2	120.0
C12	C13	O3	H131	234.7	240.0
H132	C13	O3	H131	109.5	120.0
H132	C13	C12	C14	203.1	180.0
H132	C13	C12	H12	319.8	60.1
C12	C13	H132	O3	233.0	239.9
C12	C13	H132	H131	116.5	119.9
O3	C13	H132	H131	243.5	240.0
H132	C13	O3	H3	54.8	60.0
H131	C13	C12	C14	312.6	299.9
H131	C13	C12	H12	69.3	180.0
C12	C13	H131	O3	127.0	120.1
C12	C13	H131	H132	243.5	240.1
O3	C13	H131	H132	116.5	120.0
H131	C13	O3	H3	305.3	300.0
O4	C14	C12	H12	69.2	179.9
C12	C14	O4	H142	125.3	120.0
C12	C14	O4	H141	234.8	240.0
H142	C14	O4	H141	109.5	119.9
H142	C14	C12	H12	194.4	299.9
C12	C14	H142	O4	233.8	240.0
C12	C14	H142	H141	116.9	120.0
O4	C14	H142	H141	243.1	240.1
H142	C14	O4	H4	54.8	64.8
H141	C14	C12	H12	303.9	59.9
C12	C14	H141	O4	126.1	120.0
C12	C14	H141	H142	243.1	240.0
O4	C14	H141	H142	116.9	120.0
H141	C14	O4	H4	305.3	304.9
H3	O3	C13	H132	54.8	60.0
H3	O3	C13	H131	305.3	300.0
H4	O4	C14	H142	54.8	64.8
H4	O4	C14	H141	305.3	304.9