PDB Chemical Component CCS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CCS
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.438 |
1.469 |
| N |
H |
1.020 |
1.009 |
| N |
H2 |
1.020 |
1.008 |
| CA |
CB |
1.571 |
1.529 |
| CA |
C |
1.516 |
1.506 |
| CA |
HA |
1.115 |
1.090 |
| CB |
SG |
1.823 |
1.813 |
| CB |
HB2 |
1.116 |
1.090 |
| CB |
HB3 |
1.115 |
1.089 |
| SG |
CD |
1.801 |
1.813 |
| CD |
CE |
1.522 |
1.506 |
| CD |
HD2 |
1.116 |
1.090 |
| CD |
HD3 |
1.115 |
1.089 |
| CE |
OZ1 |
1.238 |
1.208 |
| CE |
OZ2 |
1.227 |
1.342 |
| OZ2 |
HZ2 |
0.949 |
0.968 |
| C |
O |
1.253 |
1.208 |
| C |
OXT |
1.348 |
1.342 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for CCS
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
107.5 |
106.7 |
| CA |
N |
H2 |
113.0 |
106.6 |
| N |
CA |
CB |
107.5 |
109.5 |
| N |
CA |
C |
106.4 |
109.4 |
| N |
CA |
HA |
113.2 |
109.4 |
| H |
N |
H2 |
113.0 |
106.7 |
| CB |
CA |
C |
110.8 |
109.6 |
| CB |
CA |
HA |
108.9 |
109.4 |
| CA |
CB |
SG |
113.8 |
109.6 |
| CA |
CB |
HB2 |
110.6 |
109.4 |
| CA |
CB |
HB3 |
110.7 |
109.5 |
| C |
CA |
HA |
110.0 |
109.4 |
| CA |
C |
O |
120.2 |
120.0 |
| CA |
C |
OXT |
117.8 |
120.0 |
| SG |
CB |
HB2 |
110.6 |
109.4 |
| SG |
CB |
HB3 |
110.6 |
109.5 |
| CB |
SG |
CD |
104.7 |
100.1 |
| HB2 |
CB |
HB3 |
99.7 |
109.4 |
| SG |
CD |
CE |
119.0 |
109.5 |
| SG |
CD |
HD2 |
108.8 |
109.4 |
| SG |
CD |
HD3 |
108.8 |
109.5 |
| CE |
CD |
HD2 |
108.8 |
109.5 |
| CE |
CD |
HD3 |
108.8 |
109.5 |
| CD |
CE |
OZ1 |
121.6 |
120.0 |
| CD |
CE |
OZ2 |
119.4 |
120.0 |
| HD2 |
CD |
HD3 |
101.2 |
109.4 |
| OZ1 |
CE |
OZ2 |
118.5 |
120.0 |
| CE |
OZ2 |
HZ2 |
119.4 |
119.9 |
| O |
C |
OXT |
122.0 |
120.0 |
| C |
OXT |
HXT |
117.9 |
120.1 |
Torsion Angles for CCS
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
125.4 |
113.8 |
| CB |
CA |
N |
C |
241.3 |
239.9 |
| CB |
CA |
N |
HA |
120.3 |
120.0 |
| N |
CA |
CB |
SG |
60.0 |
300.1 |
| N |
CA |
CB |
HB2 |
185.2 |
60.0 |
| N |
CA |
CB |
HB3 |
294.7 |
180.0 |
| C |
CA |
N |
HA |
239.1 |
240.1 |
| N |
CA |
C |
O |
138.3 |
329.9 |
| N |
CA |
C |
OXT |
318.9 |
150.0 |
| CA |
N |
H |
H2 |
234.7 |
246.3 |
| H |
N |
CA |
CB |
180.0 |
53.7 |
| H |
N |
CA |
C |
298.8 |
173.9 |
| H |
N |
CA |
HA |
59.7 |
293.8 |
| CA |
N |
H2 |
H |
122.3 |
113.7 |
| H2 |
N |
CA |
CB |
54.7 |
300.0 |
| H2 |
N |
CA |
C |
173.4 |
60.1 |
| H2 |
N |
CA |
HA |
294.3 |
180.0 |
| CB |
CA |
N |
H |
180.0 |
53.7 |
| CB |
CA |
N |
H2 |
54.7 |
300.0 |
| N |
CA |
CB |
C |
115.9 |
120.0 |
| N |
CA |
CB |
HA |
237.0 |
240.0 |
| C |
CA |
CB |
HA |
121.1 |
120.0 |
| CB |
CA |
C |
O |
254.8 |
90.0 |
| CB |
CA |
C |
OXT |
75.5 |
270.1 |
| SG |
CB |
CA |
HB2 |
234.8 |
240.0 |
| SG |
CB |
CA |
HB3 |
125.3 |
120.1 |
| CA |
CB |
SG |
CD |
240.9 |
180.0 |
| HB2 |
CB |
CA |
HB3 |
250.5 |
240.1 |
| C |
CA |
N |
H |
298.8 |
173.9 |
| C |
CA |
N |
H2 |
173.4 |
60.1 |
| N |
CA |
C |
CB |
243.5 |
239.9 |
| N |
CA |
C |
HA |
123.0 |
119.9 |
| CB |
CA |
C |
HA |
239.5 |
240.0 |
| C |
CA |
CB |
SG |
304.1 |
180.0 |
| C |
CA |
CB |
HB2 |
69.3 |
300.0 |
| C |
CA |
CB |
HB3 |
178.8 |
59.9 |
| O |
C |
CA |
OXT |
179.3 |
179.9 |
| CA |
C |
OXT |
HXT |
180.1 |
179.9 |
| HA |
CA |
N |
H |
59.7 |
293.8 |
| HA |
CA |
N |
H2 |
294.3 |
180.0 |
| N |
CA |
HA |
CB |
119.5 |
120.0 |
| N |
CA |
HA |
C |
241.1 |
240.1 |
| CB |
CA |
HA |
C |
121.6 |
120.1 |
| HA |
CA |
CB |
SG |
183.0 |
60.0 |
| HA |
CA |
CB |
HB2 |
308.2 |
180.0 |
| HA |
CA |
CB |
HB3 |
57.7 |
299.9 |
| HA |
CA |
C |
O |
15.3 |
210.0 |
| HA |
CA |
C |
OXT |
195.9 |
30.1 |
| SG |
CB |
CA |
C |
304.1 |
180.0 |
| SG |
CB |
CA |
HA |
183.0 |
60.0 |
| CA |
CB |
SG |
HB2 |
125.3 |
120.0 |
| CA |
CB |
SG |
HB3 |
234.7 |
239.9 |
| HB2 |
CB |
SG |
HB3 |
109.5 |
119.9 |
| CB |
SG |
CD |
CE |
77.1 |
180.0 |
| CB |
SG |
CD |
HD2 |
202.4 |
300.0 |
| CB |
SG |
CD |
HD3 |
311.8 |
59.9 |
| HB2 |
CB |
CA |
C |
69.3 |
300.0 |
| HB2 |
CB |
CA |
HA |
308.2 |
180.0 |
| CA |
CB |
HB2 |
SG |
233.0 |
240.0 |
| CA |
CB |
HB2 |
HB3 |
116.5 |
120.0 |
| SG |
CB |
HB2 |
HB3 |
243.5 |
240.0 |
| HB2 |
CB |
SG |
CD |
115.6 |
60.0 |
| HB3 |
CB |
CA |
C |
178.8 |
59.9 |
| HB3 |
CB |
CA |
HA |
57.7 |
299.9 |
| CA |
CB |
HB3 |
SG |
127.0 |
120.1 |
| CA |
CB |
HB3 |
HB2 |
243.5 |
240.1 |
| SG |
CB |
HB3 |
HB2 |
116.5 |
119.9 |
| HB3 |
CB |
SG |
CD |
6.2 |
300.1 |
| CD |
SG |
CB |
HB2 |
115.6 |
60.0 |
| CD |
SG |
CB |
HB3 |
6.2 |
300.1 |
| CE |
CD |
SG |
HD2 |
234.7 |
240.0 |
| CE |
CD |
SG |
HD3 |
125.3 |
120.1 |
| SG |
CD |
CE |
OZ1 |
332.3 |
0.0 |
| SG |
CD |
CE |
OZ2 |
160.0 |
180.0 |
| HD2 |
CD |
SG |
HD3 |
250.6 |
240.1 |
| SG |
CD |
CE |
HD2 |
125.3 |
119.9 |
| SG |
CD |
CE |
HD3 |
234.7 |
240.0 |
| HD2 |
CD |
CE |
HD3 |
109.4 |
120.0 |
| OZ1 |
CE |
CD |
OZ2 |
172.3 |
180.1 |
| CD |
CE |
OZ2 |
HZ2 |
180.0 |
180.0 |
| SG |
CD |
HD2 |
CE |
229.0 |
240.0 |
| SG |
CD |
HD2 |
HD3 |
114.5 |
119.9 |
| CE |
CD |
HD2 |
HD3 |
245.5 |
239.9 |
| HD2 |
CD |
CE |
OZ1 |
207.0 |
240.1 |
| HD2 |
CD |
CE |
OZ2 |
34.7 |
60.0 |
| SG |
CD |
HD3 |
CE |
131.0 |
120.1 |
| SG |
CD |
HD3 |
HD2 |
245.5 |
240.1 |
| CE |
CD |
HD3 |
HD2 |
114.5 |
120.1 |
| HD3 |
CD |
CE |
OZ1 |
97.6 |
120.1 |
| HD3 |
CD |
CE |
OZ2 |
285.3 |
300.0 |
| OZ1 |
CE |
CD |
HD2 |
207.0 |
240.1 |
| OZ1 |
CE |
CD |
HD3 |
97.6 |
120.1 |
| CD |
CE |
OZ1 |
OZ2 |
187.6 |
179.9 |
| OZ1 |
CE |
OZ2 |
HZ2 |
7.4 |
359.9 |
| OZ2 |
CE |
CD |
HD2 |
34.7 |
60.0 |
| OZ2 |
CE |
CD |
HD3 |
285.3 |
300.0 |
| CD |
CE |
OZ2 |
OZ1 |
172.6 |
180.1 |
| O |
C |
CA |
HA |
15.3 |
210.0 |
| CA |
C |
O |
OXT |
180.7 |
180.1 |
| O |
C |
OXT |
HXT |
0.7 |
0.0 |
| OXT |
C |
CA |
HA |
195.9 |
30.1 |
| CA |
C |
OXT |
O |
179.3 |
179.9 |