PDB Chemical Component CCE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CCE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.475 |
1.469 |
N1 |
C8 |
1.482 |
1.469 |
N1 |
C9 |
1.489 |
1.469 |
N1 |
C10 |
1.481 |
1.468 |
C2 |
C3 |
1.528 |
1.530 |
C2 |
H2C1 |
1.115 |
1.090 |
C2 |
H2C2 |
1.115 |
1.090 |
C3 |
O4 |
1.440 |
1.452 |
C3 |
H3C1 |
1.115 |
1.090 |
C3 |
H3C2 |
1.115 |
1.090 |
O4 |
C5 |
1.472 |
1.346 |
C5 |
O7 |
1.210 |
1.215 |
C5 |
N6 |
1.332 |
1.348 |
C8 |
H8C1 |
1.115 |
1.089 |
C8 |
H8C2 |
1.115 |
1.090 |
C8 |
H8C3 |
1.115 |
1.090 |
C9 |
H9C1 |
1.115 |
1.090 |
C9 |
H9C2 |
1.115 |
1.090 |
C9 |
H9C3 |
1.115 |
1.090 |
C10 |
H101 |
1.115 |
1.090 |
C10 |
H102 |
1.115 |
1.091 |
C10 |
H103 |
1.115 |
1.090 |
N6 |
H6N1 |
1.019 |
0.970 |
N6 |
H6N2 |
1.020 |
0.971 |
Bond Angles for CCE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C8 |
112.2 |
109.4 |
C2 |
N1 |
C9 |
109.6 |
109.5 |
C2 |
N1 |
C10 |
107.2 |
109.5 |
N1 |
C2 |
C3 |
114.8 |
109.5 |
N1 |
C2 |
H2C1 |
110.3 |
109.5 |
N1 |
C2 |
H2C2 |
110.3 |
109.5 |
C8 |
N1 |
C9 |
110.7 |
109.5 |
C8 |
N1 |
C10 |
107.2 |
109.5 |
N1 |
C8 |
H8C1 |
112.2 |
109.5 |
N1 |
C8 |
H8C2 |
111.2 |
109.5 |
N1 |
C8 |
H8C3 |
111.2 |
109.4 |
C9 |
N1 |
C10 |
109.9 |
109.5 |
N1 |
C9 |
H9C1 |
109.6 |
109.5 |
N1 |
C9 |
H9C2 |
112.2 |
109.5 |
N1 |
C9 |
H9C3 |
112.2 |
109.5 |
N1 |
C10 |
H101 |
107.2 |
109.5 |
N1 |
C10 |
H102 |
113.1 |
109.5 |
N1 |
C10 |
H103 |
113.1 |
109.5 |
C3 |
C2 |
H2C1 |
110.3 |
109.5 |
C3 |
C2 |
H2C2 |
110.3 |
109.5 |
C2 |
C3 |
O4 |
110.4 |
109.5 |
C2 |
C3 |
H3C1 |
111.9 |
109.5 |
C2 |
C3 |
H3C2 |
111.9 |
109.5 |
H2C1 |
C2 |
H2C2 |
100.0 |
109.4 |
O4 |
C3 |
H3C1 |
111.9 |
109.4 |
O4 |
C3 |
H3C2 |
111.9 |
109.5 |
C3 |
O4 |
C5 |
121.5 |
120.0 |
H3C1 |
C3 |
H3C2 |
98.5 |
109.5 |
O4 |
C5 |
O7 |
117.1 |
120.0 |
O4 |
C5 |
N6 |
121.0 |
120.0 |
O7 |
C5 |
N6 |
121.9 |
120.0 |
C5 |
N6 |
H6N1 |
121.0 |
120.0 |
C5 |
N6 |
H6N2 |
121.9 |
120.0 |
H8C1 |
C8 |
H8C2 |
111.2 |
109.5 |
H8C1 |
C8 |
H8C3 |
111.2 |
109.5 |
H8C2 |
C8 |
H8C3 |
99.1 |
109.4 |
H9C1 |
C9 |
H9C2 |
112.2 |
109.4 |
H9C1 |
C9 |
H9C3 |
112.2 |
109.5 |
H9C2 |
C9 |
H9C3 |
98.2 |
109.5 |
H101 |
C10 |
H102 |
113.1 |
109.4 |
H101 |
C10 |
H103 |
113.1 |
109.5 |
H102 |
C10 |
H103 |
97.4 |
109.4 |
H6N1 |
N6 |
H6N2 |
117.1 |
120.0 |
Torsion Angles for CCE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
N1 |
C2 |
C9 |
236.6 |
120.0 |
C8 |
N1 |
C2 |
C10 |
117.4 |
240.0 |
C2 |
N1 |
C8 |
H8C1 |
180.0 |
300.0 |
C2 |
N1 |
C8 |
H8C2 |
54.8 |
60.0 |
C2 |
N1 |
C8 |
H8C3 |
305.3 |
180.0 |
C9 |
N1 |
C2 |
C10 |
240.8 |
120.0 |
C2 |
N1 |
C9 |
H9C1 |
180.0 |
189.8 |
C2 |
N1 |
C9 |
H9C2 |
54.7 |
309.8 |
C2 |
N1 |
C9 |
H9C3 |
305.3 |
69.8 |
C2 |
N1 |
C10 |
H101 |
180.0 |
300.0 |
C2 |
N1 |
C10 |
H102 |
54.7 |
60.0 |
C2 |
N1 |
C10 |
H103 |
305.3 |
180.0 |
C3 |
C2 |
N1 |
H2C1 |
125.3 |
240.0 |
C3 |
C2 |
N1 |
H2C2 |
234.7 |
120.0 |
N1 |
C2 |
C3 |
O4 |
181.6 |
67.8 |
N1 |
C2 |
C3 |
H3C1 |
56.3 |
187.7 |
N1 |
C2 |
C3 |
H3C2 |
306.9 |
307.7 |
H2C1 |
C2 |
N1 |
H2C2 |
109.5 |
240.0 |
C2 |
N1 |
C8 |
C9 |
122.8 |
240.0 |
C2 |
N1 |
C8 |
C10 |
242.6 |
120.0 |
C8 |
N1 |
C2 |
C3 |
309.8 |
55.1 |
C8 |
N1 |
C2 |
H2C1 |
184.5 |
175.1 |
C8 |
N1 |
C2 |
H2C2 |
75.1 |
295.1 |
C9 |
N1 |
C8 |
C10 |
119.8 |
240.0 |
C8 |
N1 |
C9 |
H9C1 |
304.2 |
69.8 |
C8 |
N1 |
C9 |
H9C2 |
179.0 |
189.8 |
C8 |
N1 |
C9 |
H9C3 |
69.5 |
309.8 |
C8 |
N1 |
C10 |
H101 |
59.4 |
60.0 |
C8 |
N1 |
C10 |
H102 |
294.1 |
180.0 |
C8 |
N1 |
C10 |
H103 |
184.7 |
300.0 |
H8C1 |
C8 |
N1 |
H8C2 |
125.2 |
239.9 |
H8C1 |
C8 |
N1 |
H8C3 |
234.7 |
120.0 |
H8C2 |
C8 |
N1 |
H8C3 |
109.5 |
240.1 |
C2 |
N1 |
C9 |
C8 |
235.7 |
120.0 |
C2 |
N1 |
C9 |
C10 |
117.5 |
240.0 |
C9 |
N1 |
C2 |
C3 |
73.2 |
295.1 |
C9 |
N1 |
C2 |
H2C1 |
307.9 |
55.2 |
C9 |
N1 |
C2 |
H2C2 |
198.4 |
175.1 |
C8 |
N1 |
C9 |
C10 |
241.8 |
120.0 |
C9 |
N1 |
C8 |
H8C1 |
57.2 |
59.9 |
C9 |
N1 |
C8 |
H8C2 |
292.0 |
180.0 |
C9 |
N1 |
C8 |
H8C3 |
182.5 |
300.0 |
C9 |
N1 |
C10 |
H101 |
299.0 |
180.0 |
C9 |
N1 |
C10 |
H102 |
173.8 |
300.0 |
C9 |
N1 |
C10 |
H103 |
64.3 |
60.0 |
H9C1 |
C9 |
N1 |
H9C2 |
125.3 |
240.0 |
H9C1 |
C9 |
N1 |
H9C3 |
234.7 |
120.0 |
H9C2 |
C9 |
N1 |
H9C3 |
109.4 |
240.0 |
C2 |
N1 |
C10 |
C8 |
120.6 |
240.0 |
C2 |
N1 |
C10 |
C9 |
241.0 |
120.0 |
C10 |
N1 |
C2 |
C3 |
192.4 |
175.1 |
C10 |
N1 |
C2 |
H2C1 |
67.1 |
295.1 |
C10 |
N1 |
C2 |
H2C2 |
317.6 |
55.1 |
C8 |
N1 |
C10 |
C9 |
120.3 |
240.0 |
C10 |
N1 |
C8 |
H8C1 |
297.4 |
180.0 |
C10 |
N1 |
C8 |
H8C2 |
172.1 |
300.0 |
C10 |
N1 |
C8 |
H8C3 |
62.7 |
60.0 |
C10 |
N1 |
C9 |
H9C1 |
62.5 |
309.8 |
C10 |
N1 |
C9 |
H9C2 |
297.2 |
69.8 |
C10 |
N1 |
C9 |
H9C3 |
187.8 |
189.8 |
H101 |
C10 |
N1 |
H102 |
125.3 |
240.0 |
H101 |
C10 |
N1 |
H103 |
234.7 |
120.1 |
H102 |
C10 |
N1 |
H103 |
109.4 |
240.0 |
C3 |
C2 |
N1 |
C8 |
309.8 |
55.1 |
C3 |
C2 |
N1 |
C9 |
73.2 |
295.1 |
C3 |
C2 |
N1 |
C10 |
192.4 |
175.1 |
N1 |
C2 |
C3 |
H2C1 |
234.7 |
120.0 |
N1 |
C2 |
C3 |
H2C2 |
125.3 |
240.0 |
H2C1 |
C2 |
C3 |
H2C2 |
250.5 |
120.0 |
O4 |
C3 |
C2 |
H3C1 |
125.3 |
240.0 |
O4 |
C3 |
C2 |
H3C2 |
234.7 |
120.0 |
C2 |
C3 |
O4 |
C5 |
233.7 |
180.0 |
H3C1 |
C3 |
C2 |
H3C2 |
109.4 |
240.0 |
H2C1 |
C2 |
N1 |
C8 |
184.5 |
175.1 |
H2C1 |
C2 |
N1 |
C9 |
307.9 |
55.2 |
H2C1 |
C2 |
N1 |
C10 |
67.1 |
295.1 |
N1 |
C2 |
H2C1 |
C3 |
127.8 |
240.0 |
N1 |
C2 |
H2C1 |
H2C2 |
243.9 |
120.0 |
C3 |
C2 |
H2C1 |
H2C2 |
116.1 |
240.0 |
H2C1 |
C2 |
C3 |
O4 |
306.9 |
307.7 |
H2C1 |
C2 |
C3 |
H3C1 |
181.6 |
67.7 |
H2C1 |
C2 |
C3 |
H3C2 |
72.2 |
187.7 |
H2C2 |
C2 |
N1 |
C8 |
75.1 |
295.1 |
H2C2 |
C2 |
N1 |
C9 |
198.4 |
175.1 |
H2C2 |
C2 |
N1 |
C10 |
317.6 |
55.1 |
N1 |
C2 |
H2C2 |
C3 |
232.2 |
120.0 |
N1 |
C2 |
H2C2 |
H2C1 |
116.1 |
240.0 |
C3 |
C2 |
H2C2 |
H2C1 |
243.9 |
120.0 |
H2C2 |
C2 |
C3 |
O4 |
56.3 |
187.7 |
H2C2 |
C2 |
C3 |
H3C1 |
291.1 |
307.7 |
H2C2 |
C2 |
C3 |
H3C2 |
181.6 |
67.7 |
O4 |
C3 |
C2 |
H2C1 |
306.9 |
307.7 |
O4 |
C3 |
C2 |
H2C2 |
56.3 |
187.7 |
C2 |
C3 |
O4 |
H3C1 |
234.8 |
120.0 |
C2 |
C3 |
O4 |
H3C2 |
125.3 |
240.0 |
H3C1 |
C3 |
O4 |
H3C2 |
250.5 |
120.0 |
C3 |
O4 |
C5 |
O7 |
182.4 |
360.0 |
C3 |
O4 |
C5 |
N6 |
1.8 |
180.0 |
H3C1 |
C3 |
C2 |
H2C1 |
181.6 |
67.7 |
H3C1 |
C3 |
C2 |
H2C2 |
291.1 |
307.7 |
C2 |
C3 |
H3C1 |
O4 |
124.4 |
240.0 |
C2 |
C3 |
H3C1 |
H3C2 |
242.2 |
120.0 |
O4 |
C3 |
H3C1 |
H3C2 |
117.8 |
240.0 |
H3C1 |
C3 |
O4 |
C5 |
359.0 |
60.0 |
H3C2 |
C3 |
C2 |
H2C1 |
72.2 |
187.7 |
H3C2 |
C3 |
C2 |
H2C2 |
181.6 |
67.7 |
C2 |
C3 |
H3C2 |
O4 |
235.6 |
120.0 |
C2 |
C3 |
H3C2 |
H3C1 |
117.8 |
240.0 |
O4 |
C3 |
H3C2 |
H3C1 |
242.2 |
120.0 |
H3C2 |
C3 |
O4 |
C5 |
108.4 |
300.0 |
C5 |
O4 |
C3 |
H3C1 |
359.0 |
60.0 |
C5 |
O4 |
C3 |
H3C2 |
108.4 |
300.0 |
O7 |
C5 |
O4 |
N6 |
180.6 |
180.0 |
O4 |
C5 |
N6 |
H6N1 |
180.0 |
360.0 |
O4 |
C5 |
N6 |
H6N2 |
0.6 |
180.0 |
O4 |
C5 |
O7 |
N6 |
179.4 |
180.0 |
O7 |
C5 |
N6 |
H6N1 |
359.3 |
180.0 |
O7 |
C5 |
N6 |
H6N2 |
180.0 |
360.0 |
O4 |
C5 |
N6 |
O7 |
180.7 |
180.0 |
H6N1 |
N6 |
C5 |
H6N2 |
179.4 |
180.0 |
H8C1 |
C8 |
N1 |
C9 |
57.2 |
59.9 |
H8C1 |
C8 |
N1 |
C10 |
297.4 |
180.0 |
N1 |
C8 |
H8C1 |
H8C2 |
234.8 |
120.1 |
N1 |
C8 |
H8C1 |
H8C3 |
125.3 |
240.0 |
H8C2 |
C8 |
H8C1 |
H8C3 |
250.5 |
120.0 |
H8C2 |
C8 |
N1 |
C9 |
292.0 |
180.0 |
H8C2 |
C8 |
N1 |
C10 |
172.1 |
300.0 |
N1 |
C8 |
H8C2 |
H8C1 |
125.8 |
239.9 |
N1 |
C8 |
H8C2 |
H8C3 |
242.9 |
119.9 |
H8C1 |
C8 |
H8C2 |
H8C3 |
117.1 |
240.0 |
H8C3 |
C8 |
N1 |
C9 |
182.5 |
300.0 |
H8C3 |
C8 |
N1 |
C10 |
62.7 |
60.0 |
N1 |
C8 |
H8C3 |
H8C1 |
234.2 |
120.0 |
N1 |
C8 |
H8C3 |
H8C2 |
117.1 |
240.0 |
H8C1 |
C8 |
H8C3 |
H8C2 |
242.9 |
120.0 |
H9C1 |
C9 |
N1 |
C10 |
62.5 |
309.8 |
N1 |
C9 |
H9C1 |
H9C2 |
234.7 |
120.0 |
N1 |
C9 |
H9C1 |
H9C3 |
125.3 |
240.0 |
H9C2 |
C9 |
H9C1 |
H9C3 |
250.5 |
120.0 |
H9C2 |
C9 |
N1 |
C10 |
297.2 |
69.8 |
N1 |
C9 |
H9C2 |
H9C1 |
123.9 |
240.0 |
N1 |
C9 |
H9C2 |
H9C3 |
241.9 |
120.0 |
H9C1 |
C9 |
H9C2 |
H9C3 |
118.1 |
240.0 |
H9C3 |
C9 |
N1 |
C10 |
187.8 |
189.8 |
N1 |
C9 |
H9C3 |
H9C1 |
236.1 |
120.0 |
N1 |
C9 |
H9C3 |
H9C2 |
118.1 |
240.0 |
H9C1 |
C9 |
H9C3 |
H9C2 |
241.9 |
120.0 |
N1 |
C10 |
H101 |
H102 |
234.7 |
120.0 |
N1 |
C10 |
H101 |
H103 |
125.3 |
239.9 |
H102 |
C10 |
H101 |
H103 |
250.6 |
119.9 |
N1 |
C10 |
H102 |
H101 |
122.0 |
240.0 |
N1 |
C10 |
H102 |
H103 |
241.0 |
120.0 |
H101 |
C10 |
H102 |
H103 |
119.0 |
240.0 |
N1 |
C10 |
H103 |
H101 |
238.0 |
120.1 |
N1 |
C10 |
H103 |
H102 |
119.0 |
240.0 |
H101 |
C10 |
H103 |
H102 |
241.0 |
119.9 |
C5 |
N6 |
H6N1 |
H6N2 |
180.6 |
180.0 |
C5 |
N6 |
H6N2 |
H6N1 |
179.4 |
180.0 |