PDB Chemical Component CBU

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CBU

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.551	1.529
C1	C6	1.540	1.530
C1	O1	1.422	1.429
C2	C3	1.457	1.530
C2	O2	1.484	1.429
C3	C4	1.551	1.530
C3	O3	1.481	1.429
C4	C5	1.543	1.530
C4	O4	1.401	1.429
C5	C6	1.598	1.530
C5	OXT	1.466	1.429
C6	O6	1.377	1.428
C1	H1	1.100	1.090
C2	H2	1.100	1.090
C6	H6	1.100	1.090
O1	HA	0.950	0.967
C3	H3	1.100	1.091
O2	HB	0.950	0.967
C4	H4	1.100	1.090
O3	HC	0.950	0.966
C5	H5	1.100	1.090
O4	HD	0.950	0.967
OXT	HOT	0.950	0.966
O6	HE	0.950	0.967

Bond Angles for CBU

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	107.3	109.5
C2	C1	O1	107.4	109.5
C1	C2	C3	112.5	109.5
C1	C2	O2	112.5	109.5
C2	C1	H1	113.3	109.5
C1	C2	H2	104.2	109.5
C6	C1	O1	112.6	109.5
C1	C6	C5	109.6	109.5
C1	C6	O6	111.6	109.5
C6	C1	H1	108.2	109.5
C1	C6	H6	107.7	109.4
O1	C1	H1	108.1	109.4
C1	O1	HA	109.5	114.0
C3	C2	O2	106.3	109.5
C2	C3	C4	110.7	109.5
C2	C3	O3	106.3	109.5
C3	C2	H2	110.7	109.5
C2	C3	H3	112.7	109.5
O2	C2	H2	110.7	109.4
C2	O2	HB	109.5	114.0
C4	C3	O3	114.5	109.5
C3	C4	C5	110.3	109.5
C3	C4	O4	106.7	109.5
C4	C3	H3	104.1	109.5
C3	C4	H4	110.7	109.5
O3	C3	H3	108.7	109.4
C3	O3	HC	109.5	114.0
C5	C4	O4	109.3	109.5
C4	C5	C6	108.7	109.5
C4	C5	OXT	94.4	109.5
C5	C4	H4	108.2	109.5
C4	C5	H5	123.7	109.5
O4	C4	H4	111.7	109.5
C4	O4	HD	109.5	114.0
C6	C5	OXT	120.9	109.5
C5	C6	O6	108.6	109.5
C5	C6	H6	110.7	109.5
C6	C5	H5	98.8	109.5
OXT	C5	H5	112.2	109.5
C5	OXT	HOT	109.5	114.0
O6	C6	H6	108.6	109.5
C6	O6	HE	109.5	114.0

Torsion Angles for CBU

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	O1	238.7	240.0
C2	C1	C6	C5	300.6	300.0
C2	C1	C6	O6	180.3	180.0
C6	C1	C2	H1	119.4	120.0
C2	C1	C6	H6	61.2	60.0
O1	C1	C2	H1	240.7	240.0
C2	C1	O1	HA	289.4	180.0
C3	C2	C1	O2	240.0	240.0
C1	C2	C3	C4	299.6	300.0
C1	C2	C3	O3	174.7	180.0
C3	C2	C1	H2	120.0	120.0
C1	C2	C3	H3	55.7	60.0
O2	C2	C1	H2	240.0	240.0
C1	C2	O2	HB	149.5	180.0
C2	C1	C6	O1	118.0	120.0
C6	C1	C2	C3	61.7	60.0
C6	C1	C2	O2	181.7	180.0
C2	C1	C6	H1	237.4	240.0
C6	C1	C2	H2	301.7	300.0
O1	C1	C6	H1	119.4	119.9
C6	C1	O1	HA	47.3	300.1
C4	C5	C6	C1	59.0	60.0
C1	C6	C5	OXT	311.8	300.0
C5	C6	C1	O6	120.3	120.0
C5	C6	C1	H6	239.5	240.0
C1	C6	C5	H5	189.2	180.0
O6	C6	C1	H6	119.1	120.0
C1	C6	O6	HE	3.9	179.9
C2	C1	O1	C6	242.1	240.0
O1	C1	C2	C3	183.0	180.0
O1	C1	C2	O2	303.0	300.0
C2	C1	O1	H1	122.6	120.0
O1	C1	C2	H2	63.0	60.0
O1	C1	C6	C5	182.7	180.0
O1	C1	C6	O6	62.3	60.0
C6	C1	O1	H1	240.5	240.0
O1	C1	C6	H6	303.2	300.0
C3	C2	C1	C6	61.7	60.0
C3	C2	C1	O1	183.0	180.0
C1	C2	C3	O2	123.5	120.0
C3	C2	C1	H1	302.3	300.0
C1	C2	C3	H2	243.8	240.0
O2	C2	C3	H2	120.3	120.0
C3	C2	O2	HB	273.0	300.0
C4	C3	C2	O3	124.9	120.0
C2	C3	C4	C5	57.7	60.0
C2	C3	C4	O4	299.1	300.0
C4	C3	C2	H3	243.9	240.0
C2	C3	C4	H4	177.4	180.0
O3	C3	C2	H3	119.0	119.9
C2	C3	O3	HC	114.5	180.0
O2	C2	C1	C6	181.7	180.0
O2	C2	C1	O1	303.0	300.0
C1	C2	O2	C3	236.5	240.0
O2	C2	C1	H1	62.3	60.0
C1	C2	O2	H2	116.2	120.0
O2	C2	C3	C4	176.0	180.0
O2	C2	C3	O3	51.2	60.0
C3	C2	O2	H2	239.7	240.0
O2	C2	C3	H3	292.2	300.1
C4	C3	C2	O2	176.0	180.0
C2	C3	C4	O3	239.9	240.0
C4	C3	C2	H2	55.7	60.0
C2	C3	C4	H3	121.3	120.0
O3	C3	C4	H3	241.4	240.1
C4	C3	O3	HC	352.0	60.0
C5	C4	C3	O4	118.6	120.0
C3	C4	C5	C6	303.9	300.0
C3	C4	C5	OXT	68.6	60.0
C5	C4	C3	H4	240.3	240.0
C3	C4	C5	H5	189.0	180.0
O4	C4	C3	H4	121.7	120.0
C3	C4	O4	HD	255.0	180.0
O3	C3	C2	O2	51.2	60.0
C2	C3	O3	C4	122.5	120.0
O3	C3	C2	H2	290.9	300.0
C2	C3	O3	H3	238.5	240.0
O3	C3	C4	C5	177.8	180.0
O3	C3	C4	O4	59.2	60.0
C4	C3	O3	H3	115.9	120.0
O3	C3	C4	H4	297.5	300.0
C1	C6	C5	C4	59.0	60.0
C5	C4	C3	O3	177.8	180.0
C3	C4	C5	O4	243.0	240.0
C5	C4	C3	H3	296.4	300.0
C3	C4	C5	H4	121.2	120.0
O4	C4	C5	H4	238.2	240.0
C5	C4	O4	HD	135.7	60.0
C6	C5	C4	OXT	235.3	240.0
C4	C5	C6	O6	181.2	180.0
C4	C5	C6	H6	300.4	300.0
C6	C5	C4	H5	114.8	120.0
OXT	C5	C4	H5	239.5	240.0
C4	C5	OXT	HOT	226.7	180.0
O4	C4	C3	O3	59.2	60.0
C3	C4	O4	C5	119.3	120.0
O4	C4	C3	H3	177.8	179.9
C3	C4	O4	H4	238.9	240.0
O4	C4	C5	C6	60.9	60.0
O4	C4	C5	OXT	185.6	180.0
C5	C4	O4	H4	119.6	120.0
O4	C4	C5	H5	306.1	300.0
C5	C6	C1	O1	182.7	180.0
C1	C6	C5	O6	237.8	240.0
C5	C6	C1	H1	63.3	60.0
C1	C6	C5	H6	118.6	119.9
C6	C5	C4	O4	60.9	60.0
C4	C5	C6	OXT	107.2	120.0
C6	C5	C4	H4	182.7	180.0
C4	C5	C6	H5	229.8	240.0
OXT	C5	C6	H5	122.6	120.0
C6	C5	OXT	HOT	341.6	300.0
O6	C6	C5	H6	240.8	240.0
C5	C6	O6	HE	243.0	59.9
OXT	C5	C4	O4	185.6	180.0
C4	C5	OXT	C6	245.1	240.0
OXT	C5	C4	H4	307.4	300.0
C4	C5	OXT	H5	129.2	120.0
OXT	C5	C6	O6	73.9	60.0
OXT	C5	C6	H6	193.1	180.1
C6	C5	OXT	H5	244.1	240.0
O6	C6	C1	O1	62.3	60.0
C1	C6	O6	C5	120.9	120.0
O6	C6	C1	H1	302.9	300.0
C1	C6	O6	H6	241.4	240.1
O6	C6	C5	OXT	73.9	60.0
C5	C6	O6	H6	120.5	120.0
O6	C6	C5	H5	311.3	300.0
C2	C1	H1	C6	118.8	120.0
C2	C1	H1	O1	241.1	240.0
H1	C1	C2	C3	302.3	300.0
H1	C1	C2	O2	62.3	60.0
H1	C1	C2	H2	182.3	179.9
C6	C1	H1	O1	122.2	120.0
H1	C1	C6	C5	63.3	60.0
H1	C1	C6	O6	302.9	300.0
H1	C1	C6	H6	183.8	180.0
H1	C1	O1	HA	166.8	60.1
H2	C2	C1	C6	301.7	300.0
H2	C2	C1	O1	63.0	60.0
C1	C2	H2	C3	121.2	120.0
C1	C2	H2	O2	238.8	240.0
H2	C2	C1	H1	182.3	179.9
C3	C2	H2	O2	117.6	120.0
H2	C2	C3	C4	55.7	60.0
H2	C2	C3	O3	290.9	300.0
H2	C2	C3	H3	171.9	180.1
H2	C2	O2	HB	33.3	60.0
H6	C6	C1	O1	303.2	300.0
C1	C6	H6	C5	240.2	240.0
C1	C6	H6	O6	121.0	120.0
H6	C6	C1	H1	183.8	180.0
H6	C6	C5	OXT	193.1	180.1
C5	C6	H6	O6	240.8	240.0
H6	C6	C5	H5	70.5	60.1
H6	C6	O6	HE	122.5	299.9
HA	O1	C1	H1	166.8	60.1
H3	C3	C2	O2	292.2	300.1
C2	C3	H3	C4	240.0	240.0
C2	C3	H3	O3	117.6	120.0
H3	C3	C2	H2	171.9	180.1
C4	C3	H3	O3	237.6	240.0
H3	C3	C4	C5	296.4	300.0
H3	C3	C4	O4	177.8	179.9
H3	C3	C4	H4	56.1	60.0
H3	C3	O3	HC	236.1	300.0
HB	O2	C2	H2	33.3	60.0
H4	C4	C3	O3	297.5	300.0
C3	C4	H4	C5	239.0	240.0
C3	C4	H4	O4	118.7	120.0
H4	C4	C3	H3	56.1	60.0
C5	C4	H4	O4	239.7	240.0
H4	C4	C5	C6	182.7	180.0
H4	C4	C5	OXT	307.4	300.0
H4	C4	C5	H5	67.9	60.0
H4	C4	O4	HD	16.1	300.0
HC	O3	C3	H3	236.1	300.0
H5	C5	C4	O4	306.1	300.0
C4	C5	H5	C6	119.6	120.0
C4	C5	H5	OXT	248.2	240.0
H5	C5	C4	H4	67.9	60.0
C6	C5	H5	OXT	128.6	120.0
H5	C5	C6	O6	311.3	300.0
H5	C5	C6	H6	70.5	60.1
H5	C5	OXT	HOT	97.5	60.0
HD	O4	C4	H4	16.1	300.0
HOT	OXT	C5	H5	97.5	60.0
HE	O6	C6	H6	122.5	299.9