PDB Chemical Component CBE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CBE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.510 |
|
C1 |
H11 |
1.115 |
|
C1 |
H12A |
1.115 |
|
C1 |
H13A |
1.115 |
|
C2 |
C3 |
1.341 |
|
C2 |
O7 |
1.371 |
|
C3 |
S4 |
1.770 |
|
C3 |
C8 |
1.479 |
|
S4 |
C5 |
1.820 |
|
C5 |
C6 |
1.541 |
|
C5 |
H51 |
1.114 |
|
C5 |
H52 |
1.115 |
|
C6 |
O7 |
1.430 |
|
C6 |
H61 |
1.115 |
|
C6 |
H62 |
1.115 |
|
C8 |
O9 |
1.230 |
|
C8 |
N10 |
1.330 |
|
N10 |
C11 |
1.416 |
|
N10 |
H10 |
1.020 |
|
C11 |
C12 |
1.400 |
|
C11 |
C16 |
1.400 |
|
C12 |
C13 |
1.400 |
|
C12 |
H12 |
1.103 |
|
C13 |
C14 |
1.400 |
|
C13 |
H13 |
1.103 |
|
C14 |
C15 |
1.400 |
|
C14 |
H14 |
1.103 |
|
C15 |
C16 |
1.400 |
|
C15 |
H15 |
1.103 |
|
C16 |
H16 |
1.103 |
|
Bond Angles for CBE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
H11 |
109.8 |
|
C2 |
C1 |
H12A |
116.1 |
|
C2 |
C1 |
H13A |
109.8 |
|
C1 |
C2 |
C3 |
116.1 |
|
C1 |
C2 |
O7 |
116.1 |
|
H11 |
C1 |
H12A |
109.8 |
|
H11 |
C1 |
H13A |
100.4 |
|
H12A |
C1 |
H13A |
109.8 |
|
C3 |
C2 |
O7 |
127.8 |
|
C2 |
C3 |
S4 |
113.9 |
|
C2 |
C3 |
C8 |
123.0 |
|
C2 |
O7 |
C6 |
114.0 |
|
S4 |
C3 |
C8 |
123.1 |
|
C3 |
S4 |
C5 |
106.9 |
|
C3 |
C8 |
O9 |
120.0 |
|
C3 |
C8 |
N10 |
120.0 |
|
S4 |
C5 |
C6 |
113.2 |
|
S4 |
C5 |
H51 |
110.8 |
|
S4 |
C5 |
H52 |
110.8 |
|
C6 |
C5 |
H51 |
110.8 |
|
C6 |
C5 |
H52 |
110.8 |
|
C5 |
C6 |
O7 |
108.4 |
|
C5 |
C6 |
H61 |
112.6 |
|
C5 |
C6 |
H62 |
112.6 |
|
H51 |
C5 |
H52 |
99.5 |
|
O7 |
C6 |
H61 |
112.6 |
|
O7 |
C6 |
H62 |
112.6 |
|
H61 |
C6 |
H62 |
97.9 |
|
O9 |
C8 |
N10 |
120.0 |
|
C8 |
N10 |
C11 |
120.0 |
|
C8 |
N10 |
H10 |
116.9 |
|
C11 |
N10 |
H10 |
123.1 |
|
N10 |
C11 |
C12 |
120.0 |
|
N10 |
C11 |
C16 |
120.0 |
|
C12 |
C11 |
C16 |
120.0 |
|
C11 |
C12 |
C13 |
120.0 |
|
C11 |
C12 |
H12 |
120.0 |
|
C11 |
C16 |
C15 |
120.0 |
|
C11 |
C16 |
H16 |
120.0 |
|
C13 |
C12 |
H12 |
120.0 |
|
C12 |
C13 |
C14 |
120.0 |
|
C12 |
C13 |
H13 |
120.0 |
|
C14 |
C13 |
H13 |
120.0 |
|
C13 |
C14 |
C15 |
120.0 |
|
C13 |
C14 |
H14 |
120.0 |
|
C15 |
C14 |
H14 |
120.0 |
|
C14 |
C15 |
C16 |
120.0 |
|
C14 |
C15 |
H15 |
120.0 |
|
C16 |
C15 |
H15 |
120.0 |
|
C15 |
C16 |
H16 |
120.0 |
|
Torsion Angles for CBE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H11 |
C1 |
C2 |
H12A |
234.7 |
|
H11 |
C1 |
C2 |
H13A |
109.5 |
|
H12A |
C1 |
C2 |
H13A |
234.8 |
|
C3 |
C2 |
C1 |
O7 |
180.0 |
|
C1 |
C2 |
C3 |
S4 |
180.0 |
|
C1 |
C2 |
C3 |
C8 |
0.0 |
|
C1 |
C2 |
O7 |
C6 |
130.2 |
|
C2 |
C1 |
H11 |
H12A |
128.8 |
|
C2 |
C1 |
H11 |
H13A |
244.4 |
|
H11 |
C1 |
C2 |
C3 |
54.7 |
|
H11 |
C1 |
C2 |
O7 |
234.7 |
|
H12A |
C1 |
H11 |
H13A |
115.6 |
|
C2 |
C1 |
H12A |
H11 |
234.7 |
|
C2 |
C1 |
H12A |
H13A |
125.3 |
|
H12A |
C1 |
C2 |
C3 |
180.0 |
|
H12A |
C1 |
C2 |
O7 |
360.0 |
|
H11 |
C1 |
H12A |
H13A |
250.5 |
|
C2 |
C1 |
H13A |
H11 |
115.6 |
|
C2 |
C1 |
H13A |
H12A |
231.2 |
|
H13A |
C1 |
C2 |
C3 |
305.2 |
|
H13A |
C1 |
C2 |
O7 |
125.2 |
|
H11 |
C1 |
H13A |
H12A |
115.6 |
|
C3 |
C2 |
C1 |
H11 |
54.7 |
|
C3 |
C2 |
C1 |
H12A |
180.0 |
|
C3 |
C2 |
C1 |
H13A |
305.2 |
|
C1 |
C2 |
C3 |
O7 |
180.0 |
|
C3 |
C2 |
O7 |
C6 |
310.2 |
|
S4 |
C3 |
C2 |
C8 |
179.9 |
|
C2 |
C3 |
S4 |
C5 |
20.2 |
|
C2 |
C3 |
C8 |
O9 |
317.0 |
|
C2 |
C3 |
C8 |
N10 |
137.0 |
|
O7 |
C2 |
C1 |
H11 |
234.7 |
|
O7 |
C2 |
C1 |
H12A |
360.0 |
|
O7 |
C2 |
C1 |
H13A |
125.2 |
|
C1 |
C2 |
O7 |
C3 |
180.0 |
|
O7 |
C2 |
C3 |
S4 |
360.0 |
|
O7 |
C2 |
C3 |
C8 |
180.0 |
|
C5 |
C6 |
O7 |
C2 |
70.6 |
|
C2 |
O7 |
C6 |
H61 |
195.8 |
|
C2 |
O7 |
C6 |
H62 |
305.3 |
|
S4 |
C3 |
C2 |
O7 |
360.0 |
|
C2 |
C3 |
S4 |
C8 |
180.1 |
|
S4 |
C3 |
C8 |
O9 |
137.0 |
|
S4 |
C3 |
C8 |
N10 |
317.1 |
|
C3 |
S4 |
C5 |
C6 |
2.4 |
|
C3 |
S4 |
C5 |
H51 |
237.1 |
|
C3 |
S4 |
C5 |
H52 |
127.7 |
|
C8 |
C3 |
C2 |
O7 |
180.0 |
|
C2 |
C3 |
C8 |
S4 |
179.9 |
|
C8 |
C3 |
S4 |
C5 |
200.1 |
|
O9 |
C8 |
C3 |
N10 |
179.9 |
|
C3 |
C8 |
N10 |
C11 |
180.0 |
|
C3 |
C8 |
N10 |
H10 |
360.0 |
|
C5 |
S4 |
C3 |
C8 |
200.1 |
|
C6 |
C5 |
S4 |
H51 |
125.3 |
|
C6 |
C5 |
S4 |
H52 |
234.7 |
|
S4 |
C5 |
C6 |
O7 |
316.5 |
|
S4 |
C5 |
C6 |
H61 |
191.3 |
|
S4 |
C5 |
C6 |
H62 |
81.8 |
|
H51 |
C5 |
S4 |
H52 |
109.5 |
|
C2 |
O7 |
C6 |
C5 |
70.6 |
|
S4 |
C5 |
C6 |
H51 |
234.7 |
|
S4 |
C5 |
C6 |
H52 |
125.3 |
|
H51 |
C5 |
C6 |
H52 |
250.5 |
|
O7 |
C6 |
C5 |
H61 |
125.2 |
|
O7 |
C6 |
C5 |
H62 |
234.7 |
|
H61 |
C6 |
C5 |
H62 |
109.5 |
|
S4 |
C5 |
H51 |
C6 |
126.6 |
|
S4 |
C5 |
H51 |
H52 |
243.3 |
|
C6 |
C5 |
H51 |
H52 |
116.7 |
|
H51 |
C5 |
C6 |
O7 |
81.8 |
|
H51 |
C5 |
C6 |
H61 |
316.6 |
|
H51 |
C5 |
C6 |
H62 |
207.1 |
|
S4 |
C5 |
H52 |
C6 |
233.4 |
|
S4 |
C5 |
H52 |
H51 |
116.7 |
|
C6 |
C5 |
H52 |
H51 |
243.3 |
|
H52 |
C5 |
C6 |
O7 |
191.3 |
|
H52 |
C5 |
C6 |
H61 |
66.0 |
|
H52 |
C5 |
C6 |
H62 |
316.5 |
|
O7 |
C6 |
C5 |
H51 |
81.8 |
|
O7 |
C6 |
C5 |
H52 |
191.3 |
|
C5 |
C6 |
O7 |
H61 |
234.8 |
|
C5 |
C6 |
O7 |
H62 |
125.3 |
|
H61 |
C6 |
O7 |
H62 |
250.5 |
|
H61 |
C6 |
C5 |
H51 |
316.6 |
|
H61 |
C6 |
C5 |
H52 |
66.0 |
|
C5 |
C6 |
H61 |
O7 |
122.9 |
|
C5 |
C6 |
H61 |
H62 |
241.5 |
|
O7 |
C6 |
H61 |
H62 |
118.5 |
|
H62 |
C6 |
C5 |
H51 |
207.1 |
|
H62 |
C6 |
C5 |
H52 |
316.5 |
|
C5 |
C6 |
H62 |
O7 |
237.0 |
|
C5 |
C6 |
H62 |
H61 |
118.5 |
|
O7 |
C6 |
H62 |
H61 |
241.5 |
|
C3 |
C8 |
O9 |
N10 |
180.1 |
|
O9 |
C8 |
N10 |
C11 |
0.0 |
|
O9 |
C8 |
N10 |
H10 |
180.1 |
|
C3 |
C8 |
N10 |
O9 |
179.9 |
|
C11 |
N10 |
C8 |
H10 |
180.0 |
|
C8 |
N10 |
C11 |
C12 |
227.1 |
|
C8 |
N10 |
C11 |
C16 |
47.0 |
|
C8 |
N10 |
C11 |
H10 |
180.0 |
|
C12 |
C11 |
N10 |
C16 |
180.0 |
|
N10 |
C11 |
C12 |
C13 |
180.0 |
|
N10 |
C11 |
C12 |
H12 |
0.0 |
|
N10 |
C11 |
C16 |
C15 |
180.0 |
|
N10 |
C11 |
C16 |
H16 |
0.0 |
|
C8 |
N10 |
H10 |
C11 |
180.0 |
|
H10 |
N10 |
C11 |
C12 |
47.0 |
|
H10 |
N10 |
C11 |
C16 |
227.0 |
|
C12 |
C11 |
N10 |
H10 |
47.0 |
|
N10 |
C11 |
C12 |
C16 |
180.0 |
|
C12 |
C11 |
C16 |
C15 |
360.0 |
|
C12 |
C11 |
C16 |
H16 |
180.0 |
|
C13 |
C12 |
C11 |
H12 |
180.0 |
|
C11 |
C12 |
C13 |
C14 |
360.0 |
|
C11 |
C12 |
C13 |
H13 |
180.0 |
|
C16 |
C11 |
N10 |
H10 |
227.0 |
|
N10 |
C11 |
C16 |
C12 |
180.0 |
|
C16 |
C11 |
C12 |
C13 |
0.0 |
|
C16 |
C11 |
C12 |
H12 |
180.0 |
|
C14 |
C15 |
C16 |
C11 |
0.0 |
|
C11 |
C16 |
C15 |
H15 |
180.0 |
|
C15 |
C16 |
C11 |
H16 |
180.0 |
|
C13 |
C12 |
C11 |
C16 |
0.0 |
|
C11 |
C12 |
C13 |
H12 |
180.0 |
|
C14 |
C13 |
C12 |
H13 |
180.0 |
|
C12 |
C13 |
C14 |
C15 |
0.0 |
|
C12 |
C13 |
C14 |
H14 |
180.0 |
|
H12 |
C12 |
C11 |
C16 |
180.0 |
|
C11 |
C12 |
H12 |
C13 |
180.0 |
|
H12 |
C12 |
C13 |
C14 |
180.0 |
|
H12 |
C12 |
C13 |
H13 |
360.0 |
|
C14 |
C13 |
C12 |
H12 |
180.0 |
|
C12 |
C13 |
C14 |
H13 |
180.0 |
|
C15 |
C14 |
C13 |
H14 |
180.0 |
|
C13 |
C14 |
C15 |
C16 |
360.0 |
|
C13 |
C14 |
C15 |
H15 |
180.0 |
|
H13 |
C13 |
C12 |
H12 |
360.0 |
|
C12 |
C13 |
H13 |
C14 |
180.0 |
|
H13 |
C13 |
C14 |
C15 |
180.0 |
|
H13 |
C13 |
C14 |
H14 |
360.0 |
|
C11 |
C16 |
C15 |
C14 |
0.0 |
|
C15 |
C14 |
C13 |
H13 |
180.0 |
|
C13 |
C14 |
C15 |
H14 |
180.0 |
|
C16 |
C15 |
C14 |
H15 |
180.0 |
|
C14 |
C15 |
C16 |
H16 |
180.0 |
|
H14 |
C14 |
C13 |
H13 |
360.0 |
|
C13 |
C14 |
H14 |
C15 |
180.0 |
|
H14 |
C14 |
C15 |
C16 |
180.0 |
|
H14 |
C14 |
C15 |
H15 |
360.0 |
|
C11 |
C16 |
C15 |
H16 |
180.0 |
|
C16 |
C15 |
C14 |
H14 |
180.0 |
|
C14 |
C15 |
C16 |
H15 |
180.0 |
|
H15 |
C15 |
C14 |
H14 |
360.0 |
|
C14 |
C15 |
H15 |
C16 |
180.0 |
|
H15 |
C15 |
C16 |
H16 |
0.0 |
|
C11 |
C16 |
H16 |
C15 |
180.0 |
|
H16 |
C16 |
C15 |
H15 |
0.0 |
|