PDB Chemical Component CBB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for CBB
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N43 |
C42 |
1.325 |
1.302 |
| C42 |
N44 |
1.330 |
1.378 |
| C42 |
C40 |
1.462 |
1.481 |
| C41 |
C40 |
1.411 |
1.395 |
| C41 |
C34 |
1.412 |
1.381 |
| C40 |
C39 |
1.422 |
1.394 |
| C33 |
C34 |
1.527 |
1.507 |
| C33 |
O32 |
1.457 |
1.452 |
| C34 |
C37 |
1.421 |
1.383 |
| C39 |
C38 |
1.416 |
1.380 |
| O32 |
C31 |
1.317 |
1.348 |
| C37 |
C38 |
1.424 |
1.384 |
| C31 |
O49 |
1.194 |
1.216 |
| C31 |
C8 |
1.393 |
1.469 |
| C9 |
C8 |
1.417 |
1.360 |
| C9 |
C4 |
1.414 |
1.415 |
| C8 |
N7 |
1.348 |
1.382 |
| C4 |
C5 |
1.418 |
1.402 |
| C4 |
C3 |
1.433 |
1.408 |
| C5 |
C6 |
1.416 |
1.364 |
| N7 |
C3 |
1.386 |
1.374 |
| N7 |
C10 |
1.447 |
1.465 |
| C3 |
C2 |
1.411 |
1.393 |
| C14 |
C15 |
1.421 |
1.382 |
| C14 |
C11 |
1.426 |
1.384 |
| C10 |
C11 |
1.496 |
1.507 |
| C6 |
C1 |
1.419 |
1.390 |
| C15 |
C16 |
1.417 |
1.380 |
| C11 |
C18 |
1.377 |
1.380 |
| C2 |
C1 |
1.408 |
1.376 |
| C16 |
C17 |
1.421 |
1.394 |
| C18 |
C17 |
1.398 |
1.395 |
| C17 |
C19 |
1.452 |
1.480 |
| C19 |
N20 |
1.332 |
1.303 |
| C19 |
N21 |
1.356 |
1.378 |
| C1 |
H1 |
1.080 |
1.080 |
| C2 |
H2 |
1.080 |
1.080 |
| C5 |
H3 |
1.080 |
1.080 |
| C6 |
H4 |
1.080 |
1.079 |
| C9 |
H5 |
1.080 |
1.079 |
| C10 |
H6 |
1.100 |
1.090 |
| C10 |
H7 |
1.100 |
1.090 |
| C14 |
H8 |
1.080 |
1.080 |
| C15 |
H9 |
1.080 |
1.080 |
| C16 |
H10 |
1.080 |
1.081 |
| C18 |
H11 |
1.080 |
1.080 |
| N20 |
H12 |
1.000 |
0.970 |
| N21 |
H13 |
1.000 |
0.970 |
| N21 |
H14 |
1.000 |
0.970 |
| C33 |
H15 |
1.100 |
1.090 |
| C33 |
H16 |
1.100 |
1.090 |
| C37 |
H17 |
1.079 |
1.080 |
| C38 |
H18 |
1.080 |
1.080 |
| C39 |
H19 |
1.080 |
1.080 |
| C41 |
H20 |
1.080 |
1.080 |
| N43 |
H21 |
1.000 |
0.970 |
| N44 |
H22 |
1.000 |
0.970 |
| N44 |
H23 |
1.000 |
0.970 |
Bond Angles for CBB
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N43 |
C42 |
N44 |
119.6 |
120.0 |
| C42 |
N44 |
H22 |
120.0 |
120.0 |
| C42 |
N44 |
H23 |
120.0 |
120.0 |
| C40 |
C39 |
H19 |
120.1 |
120.1 |
| C33 |
C34 |
C37 |
124.6 |
119.9 |
| C34 |
C33 |
H15 |
108.2 |
109.5 |
| C34 |
C33 |
H16 |
108.2 |
109.5 |
| C34 |
C37 |
C38 |
120.0 |
120.3 |
| C34 |
C37 |
H17 |
120.0 |
119.9 |
| C39 |
C38 |
H18 |
120.0 |
120.0 |
| O32 |
C31 |
O49 |
121.2 |
120.0 |
| C38 |
C37 |
H17 |
120.0 |
119.8 |
| C37 |
C38 |
H18 |
120.0 |
119.9 |
| C8 |
N7 |
C10 |
126.9 |
125.6 |
| C4 |
C5 |
C6 |
119.8 |
119.9 |
| C4 |
C5 |
H3 |
120.1 |
120.1 |
| C6 |
C5 |
H3 |
120.1 |
120.1 |
| C5 |
C6 |
H4 |
120.0 |
119.7 |
| N7 |
C10 |
C11 |
114.2 |
109.4 |
| N7 |
C10 |
H6 |
108.3 |
109.5 |
| N7 |
C10 |
H7 |
108.3 |
109.5 |
| C3 |
C2 |
H2 |
120.6 |
120.1 |
| C14 |
C15 |
C16 |
120.1 |
120.2 |
| C15 |
C14 |
H8 |
120.5 |
119.9 |
| C14 |
C15 |
H9 |
119.9 |
119.9 |
| C14 |
C11 |
C18 |
120.6 |
120.1 |
| C10 |
C11 |
C18 |
111.5 |
120.0 |
| C11 |
C10 |
H6 |
108.3 |
109.4 |
| C11 |
C10 |
H7 |
108.3 |
109.5 |
| C6 |
C1 |
H1 |
119.5 |
119.7 |
| C15 |
C16 |
C17 |
118.9 |
119.9 |
| C16 |
C15 |
H9 |
120.0 |
119.9 |
| C15 |
C16 |
H10 |
120.6 |
120.0 |
| C11 |
C18 |
C17 |
120.7 |
119.9 |
| C11 |
C18 |
H11 |
119.7 |
120.1 |
| C2 |
C1 |
H1 |
119.5 |
119.7 |
| C16 |
C17 |
C19 |
124.4 |
120.1 |
| C17 |
C16 |
H10 |
120.6 |
120.1 |
| C18 |
C17 |
C19 |
115.0 |
120.1 |
| C17 |
C19 |
N20 |
121.3 |
120.0 |
| C17 |
C19 |
N21 |
115.2 |
120.0 |
| N20 |
C19 |
N21 |
123.5 |
120.0 |
| C19 |
N20 |
H12 |
112.0 |
120.0 |
| C19 |
N21 |
H13 |
120.0 |
120.0 |
| C19 |
N21 |
H14 |
120.0 |
120.0 |
| H6 |
C10 |
H7 |
109.5 |
109.5 |
| H13 |
N21 |
H14 |
120.0 |
120.0 |
| H15 |
C33 |
H16 |
109.5 |
109.4 |
| H22 |
N44 |
H23 |
120.1 |
120.0 |
Torsion Angles for CBB
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N43 |
C42 |
N44 |
H22 |
175.7 |
180.0 |
| N43 |
C42 |
N44 |
H23 |
355.7 |
359.9 |
| H22 |
N44 |
C42 |
H23 |
180.0 |
180.0 |
| C42 |
C40 |
C39 |
H19 |
357.3 |
359.9 |
| C41 |
C40 |
C39 |
H19 |
180.2 |
179.7 |
| C41 |
C34 |
C33 |
H15 |
302.8 |
153.7 |
| C41 |
C34 |
C33 |
H16 |
61.4 |
33.8 |
| C41 |
C34 |
C37 |
H17 |
181.1 |
180.3 |
| C40 |
C39 |
C38 |
H18 |
179.6 |
180.0 |
| C33 |
C34 |
C37 |
C38 |
181.5 |
180.0 |
| C33 |
C34 |
C37 |
H17 |
1.5 |
359.9 |
| H15 |
C33 |
C34 |
H16 |
241.5 |
120.0 |
| C33 |
O32 |
C31 |
O49 |
358.3 |
3.9 |
| C37 |
C34 |
C33 |
H15 |
122.5 |
334.1 |
| C37 |
C34 |
C33 |
H16 |
241.1 |
214.1 |
| C38 |
C37 |
C34 |
H17 |
180.0 |
180.0 |
| C34 |
C37 |
C38 |
H18 |
179.7 |
180.0 |
| C39 |
C38 |
C37 |
H17 |
179.7 |
180.0 |
| C37 |
C38 |
C39 |
H18 |
180.0 |
180.0 |
| C34 |
C37 |
C38 |
H17 |
180.0 |
180.0 |
| C39 |
C38 |
C37 |
H18 |
180.0 |
180.0 |
| C9 |
C8 |
N7 |
C10 |
177.3 |
180.2 |
| C9 |
C4 |
C5 |
H3 |
359.2 |
0.2 |
| C8 |
N7 |
C10 |
C11 |
86.7 |
95.5 |
| C8 |
N7 |
C10 |
H6 |
207.4 |
215.5 |
| C8 |
N7 |
C10 |
H7 |
326.1 |
335.5 |
| C6 |
C5 |
C4 |
H3 |
180.0 |
179.8 |
| C4 |
C5 |
C6 |
H4 |
179.2 |
180.0 |
| C4 |
C3 |
C2 |
H2 |
178.7 |
180.0 |
| C4 |
C5 |
C6 |
H3 |
180.0 |
180.2 |
| C5 |
C6 |
C1 |
H1 |
181.6 |
179.7 |
| N7 |
C3 |
C2 |
H2 |
359.8 |
0.0 |
| N7 |
C10 |
C11 |
C18 |
165.9 |
95.4 |
| C11 |
C10 |
N7 |
H6 |
239.3 |
240.1 |
| C11 |
C10 |
N7 |
H7 |
120.7 |
120.0 |
| H6 |
C10 |
N7 |
H7 |
241.4 |
240.0 |
| C3 |
C2 |
C1 |
H1 |
179.4 |
180.0 |
| C15 |
C14 |
C11 |
C18 |
0.5 |
0.3 |
| C14 |
C15 |
C16 |
C17 |
358.7 |
360.0 |
| C16 |
C15 |
C14 |
H9 |
180.0 |
180.0 |
| C14 |
C15 |
C16 |
H10 |
178.7 |
180.0 |
| C10 |
C11 |
C14 |
C18 |
179.4 |
179.7 |
| C14 |
C11 |
C10 |
H6 |
225.8 |
155.7 |
| C14 |
C11 |
C10 |
H7 |
107.2 |
35.6 |
| C14 |
C11 |
C18 |
C17 |
359.8 |
359.5 |
| C14 |
C11 |
C18 |
H11 |
179.8 |
179.8 |
| N7 |
C10 |
C11 |
H6 |
120.7 |
120.0 |
| N7 |
C10 |
C11 |
H7 |
239.3 |
240.0 |
| C14 |
C11 |
C10 |
C18 |
180.6 |
180.3 |
| C10 |
C11 |
C18 |
C17 |
180.4 |
179.7 |
| C10 |
C11 |
C18 |
H11 |
0.4 |
0.0 |
| H6 |
C10 |
C11 |
H7 |
118.6 |
120.0 |
| C2 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
| C16 |
C15 |
C14 |
H8 |
180.2 |
180.0 |
| C14 |
C15 |
C16 |
H9 |
180.0 |
180.0 |
| C15 |
C16 |
C17 |
C19 |
182.8 |
180.0 |
| C17 |
C16 |
C15 |
H10 |
180.0 |
180.0 |
| C18 |
C11 |
C10 |
H6 |
45.2 |
335.4 |
| C18 |
C11 |
C10 |
H7 |
286.6 |
215.4 |
| C11 |
C18 |
C17 |
C19 |
178.0 |
180.3 |
| C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
| C17 |
C16 |
C15 |
H9 |
178.7 |
180.0 |
| C15 |
C16 |
C17 |
H10 |
180.0 |
180.0 |
| C11 |
C18 |
C17 |
C16 |
359.1 |
0.5 |
| C18 |
C17 |
C16 |
C19 |
178.8 |
179.8 |
| C16 |
C17 |
C19 |
N20 |
340.7 |
174.1 |
| C16 |
C17 |
C19 |
N21 |
161.2 |
354.2 |
| C11 |
C18 |
C17 |
H11 |
180.0 |
180.3 |
| C16 |
C17 |
C18 |
C19 |
181.1 |
180.2 |
| C18 |
C17 |
C16 |
H10 |
181.6 |
179.7 |
| C18 |
C17 |
C19 |
N20 |
161.8 |
354.3 |
| C18 |
C17 |
C19 |
N21 |
342.3 |
174.4 |
| C19 |
C17 |
C16 |
H10 |
2.8 |
359.9 |
| N20 |
C19 |
C17 |
N21 |
179.5 |
179.9 |
| C17 |
C19 |
N20 |
H12 |
180.6 |
180.0 |
| C17 |
C19 |
N21 |
H13 |
179.5 |
359.9 |
| C17 |
C19 |
N21 |
H14 |
359.5 |
180.0 |
| C17 |
C19 |
N20 |
N21 |
180.6 |
180.1 |
| N20 |
C19 |
N21 |
H13 |
360.0 |
180.0 |
| N20 |
C19 |
N21 |
H14 |
180.0 |
0.1 |
| C17 |
C19 |
N21 |
N20 |
179.5 |
179.9 |
| N21 |
C19 |
N20 |
H12 |
0.0 |
359.9 |
| H13 |
N21 |
C19 |
H14 |
180.0 |
179.9 |
| H2 |
C2 |
C1 |
H1 |
359.4 |
359.9 |
| C4 |
C5 |
H3 |
C6 |
180.0 |
179.8 |
| H3 |
C5 |
C6 |
H4 |
359.2 |
359.8 |
| H4 |
C6 |
C5 |
H3 |
359.2 |
359.8 |
| H4 |
C6 |
C1 |
H1 |
1.6 |
0.2 |
| N7 |
C10 |
H6 |
C11 |
235.7 |
240.0 |
| N7 |
C10 |
H6 |
H7 |
117.9 |
120.0 |
| H6 |
C10 |
C11 |
C18 |
45.2 |
335.4 |
| C11 |
C10 |
H6 |
H7 |
242.2 |
240.0 |
| N7 |
C10 |
H7 |
C11 |
124.3 |
120.0 |
| N7 |
C10 |
H7 |
H6 |
242.1 |
240.0 |
| H7 |
C10 |
C11 |
C18 |
286.6 |
215.4 |
| C11 |
C10 |
H7 |
H6 |
117.8 |
120.0 |
| H8 |
C14 |
C15 |
C16 |
180.2 |
180.0 |
| H8 |
C14 |
C15 |
H9 |
0.2 |
0.0 |
| H8 |
C14 |
C11 |
C18 |
180.5 |
180.2 |
| C14 |
C15 |
H9 |
C16 |
180.0 |
180.0 |
| H9 |
C15 |
C14 |
H8 |
0.2 |
0.0 |
| H9 |
C15 |
C16 |
C17 |
178.7 |
180.0 |
| H9 |
C15 |
C16 |
H10 |
358.7 |
0.0 |
| C15 |
C16 |
H10 |
C17 |
180.0 |
180.0 |
| H10 |
C16 |
C15 |
H9 |
358.7 |
0.0 |
| H10 |
C16 |
C17 |
C19 |
2.8 |
359.9 |
| C11 |
C18 |
H11 |
C17 |
180.0 |
179.7 |
| H11 |
C18 |
C17 |
C19 |
358.0 |
0.0 |
| H12 |
N20 |
C19 |
N21 |
0.0 |
359.9 |
| C19 |
N21 |
H13 |
H14 |
180.0 |
180.1 |
| C19 |
N21 |
H14 |
H13 |
180.0 |
179.9 |
| H15 |
C33 |
C34 |
C37 |
122.5 |
334.1 |
| C34 |
C33 |
H15 |
H16 |
117.7 |
240.0 |
| H16 |
C33 |
C34 |
C37 |
241.1 |
214.1 |
| C34 |
C33 |
H16 |
H15 |
242.3 |
120.0 |
| C34 |
C37 |
H17 |
C38 |
180.0 |
180.0 |
| H17 |
C37 |
C38 |
H18 |
359.7 |
360.0 |
| H18 |
C38 |
C37 |
H17 |
359.7 |
360.0 |
| H19 |
C39 |
C38 |
H18 |
359.6 |
0.0 |
| H21 |
N43 |
C42 |
N44 |
184.3 |
180.0 |
| C42 |
N44 |
H22 |
H23 |
180.0 |
180.0 |
| C42 |
N44 |
H23 |
H22 |
180.0 |
180.0 |