PDB Chemical Component CB6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for CB6

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CAK CAT 1.350 1.454
CAK CAS 1.321 1.318
CAT CAI 1.406 1.412
CAT CAU 1.416 1.397
CAI CAH 1.402 1.361
CAH CAR 1.410 1.389
CAH CAA 1.543 1.506
CAR CAJ 1.407 1.375
CAJ CAU 1.404 1.399
CAU SAO 1.667 1.759
SAO CAS 1.680 1.753
CAS CAL 1.379 1.507
CAL OAN 1.439 1.429
OAN CAQ 1.364 1.357
CAQ CAG 1.412 1.303
CAQ CAW 1.525 1.500
CAG CAX 1.409 1.501
CAX CAP 1.531 1.507
CAX OAF 1.446 1.429
CAX CAM 1.549 1.530
CAP OAC 1.244 1.208
CAP OAB 1.249 1.342
CAM CAV 1.545 1.533
CAV OAD 1.431 1.429
CAV CAW 1.526 1.531
CAW OAE 1.435 1.429
CAK HAK 1.080 1.080
CAI HAI 1.080 1.080
CAR HAR 1.080 1.081
CAA HAA1 1.100 1.091
CAA HAA2 1.100 1.089
CAA HAA3 1.101 1.091
CAJ HAJ 1.080 1.080
CAL HAL1 1.100 1.090
CAL HAL2 1.100 1.091
CAG HAG 1.080 1.080
CAW HAW 1.100 1.090
OAF HAF 0.950 0.967
CAM HAM1 1.100 1.090
CAM HAM2 1.100 1.091
OAB HAB 0.950 0.967
CAV HAV 1.100 1.090
OAD HAD 0.950 0.967
OAE HAE 0.950 0.968

Bond Angles for CB6

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CAT CAK CAS 113.7 114.8
CAK CAT CAI 127.1 129.3
CAK CAT CAU 114.8 111.9
CAT CAK HAK 123.1 122.6
CAK CAS SAO 110.2 111.4
CAK CAS CAL 123.8 124.3
CAS CAK HAK 123.2 122.6
CAI CAT CAU 118.2 118.8
CAT CAI CAH 121.8 120.5
CAT CAI HAI 119.1 119.8
CAT CAU CAJ 120.9 119.8
CAT CAU SAO 106.0 109.7
CAI CAH CAR 119.1 120.6
CAI CAH CAA 118.1 119.7
CAH CAI HAI 119.1 119.8
CAR CAH CAA 122.8 119.7
CAH CAR CAJ 120.4 120.2
CAH CAR HAR 119.8 119.9
CAH CAA HAA1 109.5 109.5
CAH CAA HAA2 109.5 109.5
CAH CAA HAA3 109.5 109.5
CAR CAJ CAU 119.7 120.2
CAJ CAR HAR 119.8 119.9
CAR CAJ HAJ 120.1 119.9
CAJ CAU SAO 133.1 130.5
CAU CAJ HAJ 120.2 120.0
CAU SAO CAS 95.4 92.2
SAO CAS CAL 126.0 124.3
CAS CAL OAN 121.5 109.5
CAS CAL HAL1 105.6 109.5
CAS CAL HAL2 102.8 109.5
CAL OAN CAQ 114.7 117.0
OAN CAL HAL1 105.6 109.5
OAN CAL HAL2 102.8 109.4
OAN CAQ CAG 123.3 118.0
OAN CAQ CAW 115.3 118.0
CAG CAQ CAW 121.5 124.0
CAQ CAG CAX 125.3 123.9
CAQ CAG HAG 117.3 118.0
CAQ CAW CAV 108.9 110.0
CAQ CAW OAE 109.2 109.3
CAQ CAW HAW 111.2 109.4
CAG CAX CAP 109.8 109.3
CAG CAX OAF 108.7 109.3
CAG CAX CAM 111.2 110.2
CAX CAG HAG 117.3 118.1
CAP CAX OAF 107.9 109.4
CAP CAX CAM 110.5 109.4
CAX CAP OAC 116.6 120.0
CAX CAP OAB 118.2 120.0
OAF CAX CAM 108.6 109.2
CAX OAF HAF 109.5 114.0
CAX CAM CAV 109.6 108.5
CAX CAM HAM1 109.4 109.6
CAX CAM HAM2 109.4 109.7
OAC CAP OAB 125.3 120.0
CAP OAB HAB 109.5 117.0
CAM CAV OAD 111.1 109.6
CAM CAV CAW 108.4 108.4
CAV CAM HAM1 109.4 109.7
CAV CAM HAM2 109.4 109.6
CAM CAV HAV 109.4 109.6
OAD CAV CAW 110.4 109.6
OAD CAV HAV 107.4 109.6
CAV OAD HAD 109.5 114.0
CAV CAW OAE 112.6 109.2
CAV CAW HAW 107.7 109.6
CAW CAV HAV 110.1 110.0
OAE CAW HAW 107.3 109.3
CAW OAE HAE 109.5 114.0
HAA1 CAA HAA2 109.5 109.5
HAA1 CAA HAA3 109.5 109.4
HAA2 CAA HAA3 109.5 109.5
HAL1 CAL HAL2 119.5 109.4
HAM1 CAM HAM2 109.6 109.7

Torsion Angles for CB6

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CAT CAK CAS SAO 359.5 0.1
CAT CAK CAS CAL 180.0 180.0
CAS CAK CAT HAK 180.0 180.2
CAI CAT CAK CAU 180.4 180.1
CAK CAT CAI CAH 179.6 180.0
CAK CAT CAI HAI 359.6 359.9
CAK CAT CAU CAJ 180.6 180.0
CAK CAT CAU SAO 0.7 0.1
CAS CAK CAT CAI 180.2 180.0
CAS CAK CAT CAU 359.8 359.9
CAT CAK CAS HAK 180.0 179.8
CAU SAO CAS CAK 0.8 360.0
SAO CAS CAK CAL 179.5 180.0
CAK CAS CAL OAN 7.6 90.0
CAK CAS CAL HAL1 127.6 210.1
CAK CAS CAL HAL2 253.6 330.0
CAI CAT CAK CAS 180.2 180.0
CAK CAT CAI CAU 179.6 179.9
CAI CAT CAK HAK 0.2 359.9
CAI CAT CAU CAJ 0.2 359.9
CAI CAT CAU SAO 180.4 180.0
CAT CAI CAH CAR 359.8 359.9
CAT CAI CAH CAA 180.6 179.9
CAH CAI CAT HAI 180.0 180.1
CAU CAT CAK CAS 359.8 359.9
CAK CAT CAU CAI 180.3 180.1
CAU CAT CAK HAK 179.8 179.7
CAU CAT CAI CAH 360.0 0.1
CAU CAT CAI HAI 180.0 180.0
CAR CAJ CAU CAT 359.8 0.1
CAJ CAU CAT SAO 179.9 179.9
CAT CAU CAJ HAJ 179.8 180.0
CAT CAU SAO CAS 359.2 360.0
CAH CAI CAT CAU 360.0 0.1
CAT CAI CAH HAI 180.0 179.9
CAR CAH CAI CAA 179.2 179.9
CAI CAH CAR CAJ 0.2 0.1
CAI CAH CAR HAR 180.2 180.0
CAI CAH CAA HAA1 209.0 89.9
CAI CAH CAA HAA2 329.0 210.0
CAI CAH CAA HAA3 89.0 330.0
CAI CAH CAR CAA 180.8 180.1
CAR CAH CAI HAI 179.8 180.0
CAR CAH CAA HAA1 29.8 270.0
CAR CAH CAA HAA2 149.8 30.0
CAR CAH CAA HAA3 269.8 150.1
CAH CAR CAJ CAU 360.0 359.9
CAJ CAR CAH HAR 180.0 180.1
CAH CAR CAJ HAJ 180.0 180.0
CAI CAH CAA CAR 179.2 179.9
CAA CAH CAI HAI 0.6 0.0
CAA CAH CAR CAJ 179.4 180.0
CAA CAH CAR HAR 359.4 359.9
HAA1 CAA CAH HAA2 240.0 239.9
HAA1 CAA CAH HAA3 120.0 119.9
HAA2 CAA CAH HAA3 240.0 240.0
CAT CAU CAJ CAR 359.8 0.1
CAJ CAR CAH CAA 179.4 180.0
CAH CAR CAJ HAR 180.0 179.9
CAR CAJ CAU SAO 179.6 180.0
CAU CAJ CAR HAJ 180.0 179.9
CAT CAU CAJ SAO 180.2 180.1
CAU CAJ CAR HAR 180.0 180.0
CAR CAJ CAU HAJ 180.0 180.1
CAJ CAU SAO CAS 179.3 180.1
CAK CAS SAO CAU 0.8 360.0
CAT CAU SAO CAJ 179.8 179.9
SAO CAU CAJ HAJ 359.6 359.9
CAU SAO CAS CAL 180.3 180.0
CAK CAS SAO CAL 180.5 180.0
SAO CAS CAK HAK 179.5 180.2
SAO CAS CAL OAN 188.2 270.0
SAO CAS CAL HAL1 308.2 30.1
SAO CAS CAL HAL2 74.2 150.0
CAK CAS CAL SAO 179.4 180.0
CAL CAS CAK HAK 0.0 0.2
CAS CAL OAN CAQ 238.8 180.0
OAN CAL CAS HAL1 240.0 239.9
OAN CAL CAS HAL2 114.0 119.9
HAL1 CAL CAS HAL2 234.0 240.0
CAS CAL OAN HAL1 120.0 120.1
CAS CAL OAN HAL2 246.0 240.0
CAL OAN CAQ CAG 327.0 0.1
CAL OAN CAQ CAW 147.6 179.7
HAL1 CAL OAN HAL2 126.0 119.9
CAQ OAN CAL HAL1 118.8 59.9
CAQ OAN CAL HAL2 352.8 300.0
CAG CAQ OAN CAW 179.4 180.3
OAN CAQ CAG CAX 181.4 180.5
OAN CAQ CAG HAG 1.4 0.5
OAN CAQ CAW CAV 158.9 162.7
OAN CAQ CAW OAE 35.6 42.7
OAN CAQ CAW HAW 277.4 283.1
OAN CAQ CAG CAW 180.6 179.7
CAG CAQ CAW CAV 339.5 342.4
CAG CAQ CAW OAE 216.1 222.4
CAG CAQ CAW HAW 97.9 102.7
CAQ CAG CAX CAP 223.3 222.6
CAQ CAG CAX OAF 105.5 102.9
CAQ CAG CAX CAM 345.9 342.8
CAX CAG CAQ HAG 180.0 180.0
OAN CAQ CAW CAG 179.5 180.3
CAW CAQ CAG CAX 0.8 0.8
CAW CAQ CAG HAG 180.8 180.8
CAM CAV CAW CAQ 52.4 49.9
OAD CAV CAW CAQ 174.3 169.5
CAV CAW CAQ OAE 123.3 120.0
CAV CAW CAQ HAW 241.5 239.6
CAQ CAW CAV HAV 292.8 290.1
OAE CAW CAQ HAW 118.2 119.6
CAQ CAW OAE HAE 289.2 300.0
CAX CAG CAQ CAW 0.8 0.8
CAQ CAG CAX HAG 180.0 180.0
CAP CAX CAG OAF 117.9 119.7
CAP CAX CAG CAM 237.4 239.8
CAG CAX CAP OAC 300.0 95.1
CAG CAX CAP OAB 120.9 275.0
OAF CAX CAG CAM 119.5 120.1
CAG CAX OAF HAF 344.1 60.0
CAG CAX CAM CAV 46.8 49.5
CAG CAX CAM HAM1 166.8 169.3
CAG CAX CAM HAM2 286.9 289.8
CAG CAX CAP OAF 241.6 240.3
CAG CAX CAP CAM 123.0 120.7
CAP CAX CAG HAG 43.4 42.6
OAF CAX CAP CAM 241.4 240.4
CAP CAX OAF HAF 225.0 300.3
CAP CAX CAM CAV 169.0 169.7
CAP CAX CAM HAM1 289.0 289.5
CAP CAX CAM HAM2 49.1 50.0
OAC CAP CAX OAB 179.2 180.1
CAX CAP OAB HAB 179.1 180.0
CAG CAX OAF CAP 119.1 119.7
CAG CAX OAF CAM 238.9 239.4
OAF CAX CAG HAG 285.5 282.9
CAP CAX OAF CAM 119.8 119.7
OAF CAX CAP OAC 58.4 214.8
OAF CAX CAP OAB 239.2 34.7
OAF CAX CAM CAV 287.2 289.4
OAF CAX CAM HAM1 47.2 49.2
OAF CAX CAM HAM2 167.3 169.7
CAG CAX CAM CAP 237.8 239.8
CAG CAX CAM OAF 119.6 120.1
CAM CAX CAG HAG 165.9 162.8
CAP CAX CAM OAF 241.8 240.3
CAM CAX CAP OAC 177.0 334.4
CAM CAX CAP OAB 357.9 154.3
CAM CAX OAF HAF 105.2 180.6
CAX CAM CAV OAD 170.2 172.6
CAX CAM CAV CAW 291.7 292.2
CAV CAM CAX HAM1 240.0 240.2
CAV CAM CAX HAM2 119.9 119.7
CAX CAM CAV HAV 51.8 52.3
HAM1 CAM CAX HAM2 240.0 239.4
OAC CAP CAX OAF 58.4 214.8
OAC CAP CAX CAM 177.0 334.4
CAX CAP OAC OAB 180.9 179.9
OAC CAP OAB HAB 0.0 359.9
OAB CAP CAX OAF 239.2 34.7
OAB CAP CAX CAM 357.9 154.3
CAX CAP OAB OAC 179.1 180.1
CAQ CAW CAV CAM 52.4 49.9
CAX CAM CAV HAM1 120.0 119.7
CAX CAM CAV HAM2 240.1 240.3
OAD CAV CAM CAW 238.5 240.4
OAD CAV CAM HAV 118.4 120.3
CAM CAV OAD HAD 121.8 180.0
CAM CAV CAW OAE 173.7 169.9
CAM CAV CAW HAW 291.8 289.6
CAW CAV CAM HAV 239.9 239.9
HAM1 CAM CAV HAM2 120.0 120.6
CAQ CAW CAV OAD 174.3 169.5
CAM CAV OAD CAW 120.3 118.8
OAD CAV CAM HAM1 50.2 52.9
OAD CAV CAM HAM2 290.1 292.3
CAM CAV OAD HAV 240.4 239.7
OAD CAV CAW OAE 295.6 289.6
OAD CAV CAW HAW 53.7 49.2
CAW CAV OAD HAV 120.1 120.8
CAQ CAW CAV OAE 238.8 240.0
CAQ CAW CAV HAW 120.7 120.3
CAM CAV CAW OAD 238.1 240.4
CAW CAV CAM HAM1 171.7 172.5
CAW CAV CAM HAM2 51.6 51.9
CAM CAV CAW HAV 119.6 119.8
OAD CAV CAW HAV 241.5 239.5
CAW CAV OAD HAD 1.5 61.2
OAE CAW CAV HAW 241.9 240.3
CAV CAW OAE HAE 168.2 179.5
CAQ CAW OAE CAV 121.1 120.5
CAQ CAW OAE HAW 239.4 240.3
CAV CAW OAE HAW 118.3 119.8
OAE CAW CAV HAV 54.0 50.1
CAT CAK HAK CAS 180.0 180.2
HAK CAK CAT CAI 0.2 359.9
HAK CAK CAT CAU 179.8 179.7
HAK CAK CAS SAO 179.5 180.2
HAK CAK CAS CAL 0.0 0.2
HAI CAI CAT CAU 180.0 180.0
CAT CAI HAI CAH 180.0 180.1
HAI CAI CAH CAR 179.8 180.0
HAI CAI CAH CAA 0.6 0.0
HAR CAR CAH CAA 359.4 359.9
CAH CAR HAR CAJ 180.0 180.1
HAR CAR CAJ CAU 180.0 180.0
HAR CAR CAJ HAJ 360.0 0.1
CAH CAA HAA1 HAA2 120.0 120.1
CAH CAA HAA1 HAA3 240.0 240.1
HAA2 CAA HAA1 HAA3 120.0 120.0
CAH CAA HAA2 HAA1 240.0 239.9
CAH CAA HAA2 HAA3 120.0 120.0
HAA1 CAA HAA2 HAA3 240.0 240.1
CAH CAA HAA3 HAA1 120.0 120.0
CAH CAA HAA3 HAA2 240.0 239.9
HAA1 CAA HAA3 HAA2 120.0 120.0
CAR CAJ HAJ CAU 180.0 179.9
HAJ CAJ CAR HAR 360.0 0.1
HAJ CAJ CAU SAO 359.6 359.9
CAS CAL HAL1 OAN 230.1 239.9
CAS CAL HAL1 HAL2 115.0 120.0
HAL1 CAL OAN CAQ 118.8 59.9
OAN CAL HAL1 HAL2 245.0 240.1
CAS CAL HAL2 OAN 127.0 120.0
CAS CAL HAL2 HAL1 243.5 240.0
HAL2 CAL OAN CAQ 352.8 300.0
OAN CAL HAL2 HAL1 116.5 120.0
HAG CAG CAQ CAW 180.8 180.8
CAQ CAG HAG CAX 180.0 180.0
HAG CAG CAX CAP 43.4 42.6
HAG CAG CAX OAF 285.5 282.9
HAG CAG CAX CAM 165.9 162.8
CAQ CAW HAW CAV 240.8 239.3
CAQ CAW HAW OAE 119.3 119.7
CAV CAW HAW OAE 238.5 240.3
HAW CAW CAV HAV 172.1 169.8
HAW CAW OAE HAE 49.9 59.6
HAF OAF CAX CAM 105.2 180.6
CAX CAM HAM1 CAV 239.8 241.0
CAX CAM HAM1 HAM2 119.9 120.5
HAM1 CAM CAV OAD 50.2 52.9
HAM1 CAM CAV CAW 171.7 172.5
CAV CAM HAM1 HAM2 240.1 239.5
HAM1 CAM CAV HAV 291.7 292.6
CAX CAM HAM2 CAV 120.1 119.0
CAX CAM HAM2 HAM1 240.0 239.5
HAM2 CAM CAV OAD 290.1 292.3
HAM2 CAM CAV CAW 51.6 51.9
CAV CAM HAM2 HAM1 119.9 120.5
HAM2 CAM CAV HAV 171.7 172.0
CAM CAV HAV OAD 120.7 120.4
CAM CAV HAV CAW 240.9 240.9
HAV CAV CAM HAM1 291.7 292.6
HAV CAV CAM HAM2 171.7 172.0
OAD CAV HAV CAW 120.3 120.6
HAV CAV OAD HAD 241.4 300.4
HAV CAV CAW OAE 54.0 50.1
HAV CAV CAW HAW 172.1 169.8
HAD OAD CAV CAW 1.5 61.2
HAD OAD CAV HAV 241.4 300.4
HAE OAE CAW HAW 49.9 59.6