PDB Chemical Component C9Q
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for C9Q
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C8 |
C7 |
1.521 |
1.530 |
| C7 |
N1 |
1.464 |
1.465 |
| N1 |
C6 |
1.380 |
1.348 |
| O1 |
C6 |
1.225 |
1.217 |
| C6 |
C5 |
1.460 |
1.470 |
| CL1 |
C13 |
1.751 |
1.736 |
| C5 |
N2 |
1.377 |
1.383 |
| C5 |
C4 |
1.384 |
1.359 |
| N2 |
C9 |
1.365 |
1.372 |
| C4 |
C3 |
1.429 |
1.412 |
| C13 |
C12 |
1.393 |
1.381 |
| C13 |
C14 |
1.388 |
1.384 |
| C12 |
C11 |
1.429 |
1.395 |
| C9 |
C3 |
1.369 |
1.408 |
| C9 |
N3 |
1.330 |
1.328 |
| C3 |
C2 |
1.395 |
1.413 |
| N3 |
C10 |
1.360 |
1.316 |
| C2 |
C11 |
1.456 |
1.481 |
| C2 |
C1 |
1.401 |
1.394 |
| C14 |
C15 |
1.396 |
1.383 |
| C11 |
C16 |
1.385 |
1.394 |
| C10 |
C1 |
1.372 |
1.384 |
| C15 |
C16 |
1.395 |
1.380 |
| C1 |
H1 |
1.080 |
1.080 |
| C7 |
H2 |
1.100 |
1.090 |
| C7 |
H3 |
1.100 |
1.090 |
| C8 |
H4 |
1.100 |
1.089 |
| C8 |
H5 |
1.100 |
1.090 |
| C8 |
H6 |
1.100 |
1.090 |
| C10 |
H7 |
1.080 |
1.080 |
| C12 |
H8 |
1.080 |
1.080 |
| C14 |
H9 |
1.080 |
1.080 |
| C15 |
H10 |
1.080 |
1.080 |
| C16 |
H11 |
1.080 |
1.080 |
| C4 |
H12 |
1.080 |
1.081 |
| N2 |
H13 |
1.000 |
0.970 |
| N1 |
H14 |
1.000 |
0.969 |
Bond Angles for C9Q
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C8 |
C7 |
N1 |
113.3 |
109.4 |
| C8 |
C7 |
H2 |
108.5 |
109.4 |
| C8 |
C7 |
H3 |
108.5 |
109.5 |
| C7 |
N1 |
C6 |
122.7 |
120.0 |
| N1 |
C7 |
H2 |
108.5 |
109.5 |
| N1 |
C7 |
H3 |
108.5 |
109.5 |
| C7 |
N1 |
H14 |
118.7 |
120.0 |
| C6 |
C5 |
N2 |
129.0 |
125.5 |
| C5 |
N2 |
H13 |
124.2 |
125.5 |
| C5 |
C4 |
H12 |
125.4 |
126.2 |
| N2 |
C9 |
N3 |
124.0 |
132.8 |
| C13 |
C12 |
H8 |
119.0 |
120.1 |
| C13 |
C14 |
C15 |
119.8 |
120.3 |
| C13 |
C14 |
H9 |
120.1 |
119.8 |
| C12 |
C11 |
C16 |
117.4 |
119.8 |
| C9 |
N3 |
C10 |
112.4 |
122.0 |
| C3 |
C2 |
C11 |
117.5 |
121.1 |
| N3 |
C10 |
H7 |
117.1 |
119.2 |
| C2 |
C11 |
C16 |
124.6 |
120.2 |
| C2 |
C1 |
H1 |
120.7 |
120.3 |
| C14 |
C15 |
C16 |
121.1 |
120.1 |
| C15 |
C14 |
H9 |
120.1 |
119.8 |
| C14 |
C15 |
H10 |
119.5 |
119.9 |
| C11 |
C16 |
C15 |
120.7 |
119.9 |
| C11 |
C16 |
H11 |
119.7 |
120.0 |
| C10 |
C1 |
H1 |
120.7 |
120.4 |
| C16 |
C15 |
H10 |
119.5 |
120.0 |
| C15 |
C16 |
H11 |
119.7 |
120.1 |
| H2 |
C7 |
H3 |
109.5 |
109.5 |
| H4 |
C8 |
H5 |
109.5 |
109.4 |
| H4 |
C8 |
H6 |
109.5 |
109.5 |
| H5 |
C8 |
H6 |
109.5 |
109.4 |
Torsion Angles for C9Q
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C8 |
C7 |
N1 |
C6 |
201.2 |
180.0 |
| N1 |
C7 |
C8 |
H2 |
239.5 |
240.0 |
| N1 |
C7 |
C8 |
H3 |
120.5 |
120.0 |
| C8 |
C7 |
N1 |
H14 |
21.2 |
360.0 |
| H2 |
C7 |
C8 |
H3 |
241.1 |
240.0 |
| C8 |
C7 |
N1 |
H2 |
120.6 |
120.0 |
| C8 |
C7 |
N1 |
H3 |
239.5 |
240.0 |
| H2 |
C7 |
N1 |
H3 |
118.9 |
120.1 |
| C6 |
N1 |
C7 |
H2 |
80.6 |
60.0 |
| C6 |
N1 |
C7 |
H3 |
321.7 |
300.0 |
| C7 |
N1 |
C6 |
H14 |
180.0 |
180.0 |
| C7 |
N1 |
C6 |
O1 |
13.5 |
0.0 |
| O1 |
C6 |
C5 |
N2 |
188.5 |
180.0 |
| C7 |
N1 |
C6 |
C5 |
192.6 |
180.0 |
| C6 |
C5 |
N2 |
H13 |
358.1 |
0.0 |
| C6 |
C5 |
C4 |
H12 |
0.9 |
360.0 |
| CL1 |
C13 |
C12 |
H8 |
358.7 |
0.1 |
| CL1 |
C13 |
C14 |
H9 |
359.6 |
0.0 |
| N2 |
C5 |
C4 |
H12 |
178.9 |
180.0 |
| C5 |
N2 |
C9 |
N3 |
180.2 |
180.0 |
| N2 |
C9 |
N3 |
C10 |
179.8 |
179.7 |
| C13 |
C12 |
C11 |
C16 |
1.9 |
0.3 |
| C14 |
C13 |
C12 |
H8 |
179.1 |
180.1 |
| C13 |
C14 |
C15 |
C16 |
1.6 |
359.7 |
| C15 |
C14 |
C13 |
H9 |
180.0 |
180.0 |
| C13 |
C14 |
C15 |
H10 |
181.6 |
180.0 |
| C2 |
C11 |
C12 |
C16 |
178.1 |
179.7 |
| C12 |
C11 |
C16 |
C15 |
358.8 |
359.4 |
| C12 |
C11 |
C16 |
H11 |
178.8 |
179.7 |
| C9 |
C3 |
C2 |
C11 |
182.0 |
180.1 |
| C9 |
N3 |
C10 |
H7 |
180.8 |
180.3 |
| C3 |
C2 |
C11 |
C16 |
226.7 |
130.0 |
| C3 |
C2 |
C1 |
H1 |
180.7 |
180.0 |
| N3 |
C10 |
C1 |
H1 |
179.3 |
179.7 |
| C12 |
C11 |
C2 |
C16 |
182.1 |
180.3 |
| C11 |
C2 |
C1 |
H1 |
357.6 |
360.0 |
| C2 |
C11 |
C16 |
C15 |
180.9 |
179.7 |
| C2 |
C11 |
C16 |
H11 |
0.9 |
0.0 |
| C10 |
C1 |
C2 |
H1 |
180.0 |
180.2 |
| C13 |
C14 |
C15 |
H9 |
180.0 |
180.0 |
| C11 |
C16 |
C15 |
C14 |
359.5 |
0.6 |
| C16 |
C15 |
C14 |
H10 |
180.0 |
179.7 |
| C14 |
C15 |
C16 |
H11 |
179.5 |
180.3 |
| C14 |
C15 |
C16 |
C11 |
359.5 |
0.6 |
| C11 |
C16 |
C15 |
H10 |
179.5 |
180.3 |
| C15 |
C16 |
C11 |
H11 |
180.0 |
179.6 |
| C2 |
C1 |
C10 |
H1 |
180.0 |
179.8 |
| C16 |
C15 |
C14 |
H9 |
181.6 |
179.7 |
| C14 |
C15 |
C16 |
H10 |
180.0 |
180.3 |
| C11 |
C16 |
C15 |
H11 |
180.0 |
180.4 |
| C8 |
C7 |
H2 |
N1 |
236.5 |
240.0 |
| C8 |
C7 |
H2 |
H3 |
118.3 |
120.0 |
| H2 |
C7 |
N1 |
C6 |
80.6 |
60.0 |
| N1 |
C7 |
H2 |
H3 |
241.7 |
239.9 |
| H2 |
C7 |
N1 |
H14 |
260.6 |
240.0 |
| C8 |
C7 |
H3 |
N1 |
123.5 |
120.0 |
| C8 |
C7 |
H3 |
H2 |
241.7 |
240.0 |
| H3 |
C7 |
N1 |
C6 |
321.7 |
300.0 |
| N1 |
C7 |
H3 |
H2 |
118.2 |
120.1 |
| H3 |
C7 |
N1 |
H14 |
141.8 |
120.0 |
| H4 |
C8 |
C7 |
N1 |
180.0 |
300.0 |
| H4 |
C8 |
C7 |
H2 |
300.5 |
60.0 |
| H4 |
C8 |
C7 |
H3 |
59.4 |
180.0 |
| H5 |
C8 |
H4 |
H6 |
120.0 |
119.9 |
| H5 |
C8 |
C7 |
N1 |
300.0 |
60.0 |
| H5 |
C8 |
C7 |
H2 |
60.6 |
180.0 |
| H5 |
C8 |
C7 |
H3 |
179.5 |
300.0 |
| H4 |
C8 |
H5 |
H6 |
240.0 |
240.0 |
| H6 |
C8 |
C7 |
N1 |
60.0 |
180.0 |
| H6 |
C8 |
C7 |
H2 |
180.5 |
300.0 |
| H6 |
C8 |
C7 |
H3 |
299.4 |
60.0 |
| H4 |
C8 |
H6 |
H5 |
120.0 |
119.9 |
| H7 |
C10 |
C1 |
H1 |
359.3 |
359.9 |
| H8 |
C12 |
C11 |
C16 |
181.9 |
180.2 |
| C13 |
C14 |
H9 |
C15 |
180.0 |
180.0 |
| H9 |
C14 |
C15 |
C16 |
181.6 |
179.7 |
| H9 |
C14 |
C15 |
H10 |
1.5 |
360.0 |
| C14 |
C15 |
H10 |
C16 |
180.0 |
179.7 |
| H10 |
C15 |
C14 |
H9 |
1.5 |
360.0 |
| H10 |
C15 |
C16 |
H11 |
359.5 |
359.9 |
| C11 |
C16 |
H11 |
C15 |
180.0 |
179.6 |
| H11 |
C16 |
C15 |
H10 |
359.5 |
359.9 |
| H13 |
N2 |
C9 |
N3 |
0.1 |
0.0 |
| C7 |
N1 |
H14 |
C6 |
180.0 |
180.0 |
| H14 |
N1 |
C7 |
H2 |
260.6 |
240.0 |
| H14 |
N1 |
C7 |
H3 |
141.8 |
120.0 |