PDB Chemical Component C9N

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for C9N

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N C1 1.475 1.469
C1B C1 1.487 1.529
C1 C2 1.543 1.530
C2 N2 1.456 1.469
CN N2 1.296 1.469
N2 C3 1.440 1.469
C3 C4 1.544 1.530
C4 O 1.536 1.430
C1 H1 1.100 1.091
C2 H2 1.100 1.090
C2 H3 1.100 1.089
C3 H31 1.100 1.090
C3 H32 1.099 1.090
N H5 1.000 1.009
N H6 1.000 1.008
C1B HB3 1.101 1.090
C1B HB2 1.100 1.090
C1B HB1 1.101 1.090
CN HN2 1.100 1.090
CN HN1 1.100 1.090
CN HN3 1.100 1.090
O H 0.950 0.967
C4 H42 1.100 1.089
C4 H4 1.100 1.090

Bond Angles for C9N

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N C1 H1 109.2 109.4
C1B C1 H1 109.1 109.5
C1 C2 N2 114.0 109.5
C2 C1 H1 108.4 109.5
C1 C2 H2 108.3 109.4
C1 C2 H3 108.3 109.5
C2 N2 C3 103.1 111.0
N2 C2 H2 108.3 109.5
N2 C2 H3 108.3 109.5
N2 C3 H31 107.9 109.5
N2 C3 H32 107.9 109.4
C3 C4 O 114.1 109.5
C4 C3 H31 108.0 109.4
C4 C3 H32 108.0 109.5
C3 C4 H42 108.3 109.5
C3 C4 H4 108.3 109.5
C4 O H 109.5 114.0
O C4 H42 108.3 109.5
O C4 H4 108.3 109.5
H2 C2 H3 109.5 109.5
H31 C3 H32 109.5 109.5
H5 N H6 109.4 111.0
HB3 C1B HB2 109.4 109.4
HB3 C1B HB1 109.4 109.5
HB2 C1B HB1 109.5 109.4
HN2 CN HN1 109.4 109.5
HN2 CN HN3 109.5 109.5
HN1 CN HN3 109.5 109.5
H42 C4 H4 109.5 109.5

Torsion Angles for C9N

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C1B C1 N H1 120.7 120.0
C2 C1 N H1 242.7 240.0
N C1 C2 H2 181.1 175.0
N C1 C2 H3 299.8 295.0
N C1 C1B H1 239.3 240.1
C2 C1 C1B H1 119.4 120.0
C1B C1 C2 H2 303.5 295.0
C1B C1 C2 H3 62.1 55.0
N C1 C2 H1 117.8 120.0
C1B C1 C2 H1 240.2 240.0
C1 C2 N2 C3 184.1 190.0
N2 C2 C1 H2 239.3 240.0
N2 C2 C1 H3 120.7 120.0
H2 C2 C1 H3 241.4 240.0
N2 C2 C1 H1 302.6 295.0
C1 C2 N2 H2 120.7 120.0
C1 C2 N2 H3 239.3 240.0
C2 N2 C3 H31 278.9 316.4
C2 N2 C3 H32 37.1 196.4
H2 C2 N2 H3 118.6 120.0
CN N2 C2 H2 289.2 306.1
CN N2 C2 H3 170.5 186.1
CN N2 C3 H31 67.8 80.4
CN N2 C3 H32 186.1 320.3
C3 N2 C2 H2 63.4 70.0
C3 N2 C2 H3 304.8 310.0
N2 C3 C4 O 94.5 65.0
C4 C3 N2 H31 239.1 120.0
C4 C3 N2 H32 120.9 240.0
N2 C3 C4 H42 215.2 185.0
N2 C3 C4 H4 333.8 305.0
H31 C3 N2 H32 241.8 120.0
C2 N2 C3 C4 158.0 76.4
N2 C3 C4 H31 120.9 240.0
N2 C3 C4 H32 239.1 120.0
C3 C4 O H 180.0 180.0
O C4 C3 H42 239.3 240.0
O C4 C3 H4 120.7 120.0
H31 C3 C4 H32 118.3 239.9
H42 C4 C3 H4 241.4 240.0
O C4 C3 H31 333.7 185.0
O C4 C3 H32 215.4 305.0
C3 C4 O H42 120.7 120.0
C3 C4 O H4 239.3 240.0
H42 C4 O H4 118.6 120.0
H1 C1 C2 N2 302.6 295.0
H1 C1 C2 H2 63.3 55.0
H1 C1 C2 H3 181.9 175.0
C1 C2 H2 N2 235.8 240.0
H2 C2 C1 H1 63.3 55.0
C1 C2 H2 H3 117.9 120.0
H2 C2 N2 C3 63.4 70.0
N2 C2 H2 H3 242.1 240.0
C1 C2 H3 N2 124.2 120.0
H3 C2 C1 H1 181.9 175.0
C1 C2 H3 H2 242.1 240.0
H3 C2 N2 C3 304.8 310.0
N2 C2 H3 H2 117.9 120.0
N2 C3 H31 H32 117.3 240.0
H31 C3 C4 O 333.7 185.0
C4 C3 H31 H32 242.7 120.0
H31 C3 C4 H42 94.4 305.0
H31 C3 C4 H4 213.0 65.0
N2 C3 H32 H31 242.7 120.0
H32 C3 C4 O 215.4 305.0
C4 C3 H32 H31 117.3 240.0
H32 C3 C4 H42 336.1 65.1
H32 C3 C4 H4 94.7 185.1
H5 N C1 H1 59.4 180.0
H6 N C1 H1 179.3 304.0
HB3 C1B C1 H1 300.7 300.0
HB2 C1B HB3 HB1 120.0 119.9
HB2 C1B C1 H1 60.7 60.0
HB3 C1B HB2 HB1 240.0 240.0
HB1 C1B C1 H1 180.7 179.9
HB3 C1B HB1 HB2 120.0 119.9
HN1 CN HN2 HN3 120.0 120.1
HN2 CN HN1 HN3 240.0 239.9
HN2 CN HN3 HN1 120.0 120.0
H O C4 H42 59.3 60.0
H O C4 H4 300.7 300.0
C3 C4 H42 O 235.8 240.0
H42 C4 C3 H31 94.4 305.0
H42 C4 C3 H32 336.1 65.1
C3 C4 H42 H4 117.9 120.0
H42 C4 O H 59.3 60.0
O C4 H42 H4 242.1 240.0
C3 C4 H4 O 124.2 120.0
H4 C4 C3 H31 213.0 65.0
H4 C4 C3 H32 94.7 185.1
C3 C4 H4 H42 242.1 240.0
H4 C4 O H 300.7 300.0
O C4 H4 H42 117.9 120.0