PDB Chemical Component C9H
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for C9H
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CAA |
CAC |
1.533 |
1.529 |
| CAB |
NAG |
1.337 |
1.306 |
| CAB |
NAI |
1.333 |
1.333 |
| CAC |
CAD |
1.529 |
1.530 |
| CAD |
CAE |
1.519 |
1.529 |
| CAE |
CAF |
1.517 |
1.530 |
| CAF |
SAJ |
1.818 |
1.809 |
| NAG |
NAH |
1.235 |
1.404 |
| NAH |
CAK |
1.340 |
1.350 |
| NAI |
CAK |
1.331 |
1.317 |
| SAJ |
CAK |
1.778 |
1.762 |
| CAA |
HAA |
1.100 |
1.090 |
| CAA |
HAAA |
1.100 |
1.090 |
| CAA |
HAAB |
1.100 |
1.090 |
| CAB |
HAB |
1.080 |
1.080 |
| CAC |
HAC |
1.100 |
1.089 |
| CAC |
HACA |
1.100 |
1.091 |
| CAD |
HAD |
1.100 |
1.089 |
| CAD |
HADA |
1.100 |
1.091 |
| CAE |
HAE |
1.100 |
1.089 |
| CAE |
HAEA |
1.100 |
1.091 |
| CAF |
HAF |
1.100 |
1.089 |
| CAF |
HAFA |
1.100 |
1.091 |
| NAH |
HNAH |
1.000 |
0.971 |
Bond Angles for C9H
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAA |
CAC |
CAD |
108.6 |
109.5 |
| CAC |
CAA |
HAA |
109.5 |
109.5 |
| CAC |
CAA |
HAAA |
109.5 |
109.5 |
| CAC |
CAA |
HAAB |
109.5 |
109.5 |
| CAA |
CAC |
HAC |
109.7 |
109.5 |
| CAA |
CAC |
HACA |
109.7 |
109.5 |
| NAG |
CAB |
NAI |
108.9 |
109.2 |
| CAB |
NAG |
NAH |
109.9 |
107.0 |
| NAG |
CAB |
HAB |
125.5 |
125.4 |
| CAB |
NAI |
CAK |
103.5 |
109.7 |
| NAI |
CAB |
HAB |
125.6 |
125.4 |
| CAC |
CAD |
CAE |
111.7 |
109.5 |
| CAD |
CAC |
HAC |
109.7 |
109.5 |
| CAD |
CAC |
HACA |
109.7 |
109.4 |
| CAC |
CAD |
HAD |
108.9 |
109.5 |
| CAC |
CAD |
HADA |
108.9 |
109.4 |
| CAD |
CAE |
CAF |
107.4 |
109.5 |
| CAE |
CAD |
HAD |
108.9 |
109.5 |
| CAE |
CAD |
HADA |
108.9 |
109.5 |
| CAD |
CAE |
HAE |
110.0 |
109.5 |
| CAD |
CAE |
HAEA |
110.0 |
109.5 |
| CAE |
CAF |
SAJ |
112.8 |
109.5 |
| CAF |
CAE |
HAE |
110.0 |
109.5 |
| CAF |
CAE |
HAEA |
110.0 |
109.4 |
| CAE |
CAF |
HAF |
108.6 |
109.5 |
| CAE |
CAF |
HAFA |
108.6 |
109.4 |
| CAF |
SAJ |
CAK |
105.5 |
100.1 |
| SAJ |
CAF |
HAF |
108.7 |
109.5 |
| SAJ |
CAF |
HAFA |
108.6 |
109.5 |
| NAG |
NAH |
CAK |
107.4 |
106.4 |
| NAG |
NAH |
HNAH |
126.3 |
126.8 |
| NAH |
CAK |
NAI |
110.3 |
107.8 |
| NAH |
CAK |
SAJ |
123.9 |
126.1 |
| CAK |
NAH |
HNAH |
126.3 |
126.8 |
| NAI |
CAK |
SAJ |
125.8 |
126.1 |
| HAA |
CAA |
HAAA |
109.5 |
109.5 |
| HAA |
CAA |
HAAB |
109.4 |
109.5 |
| HAAA |
CAA |
HAAB |
109.5 |
109.4 |
| HAC |
CAC |
HACA |
109.4 |
109.5 |
| HAD |
CAD |
HADA |
109.5 |
109.5 |
| HAE |
CAE |
HAEA |
109.5 |
109.5 |
| HAF |
CAF |
HAFA |
109.5 |
109.5 |
Torsion Angles for C9H
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAA |
CAC |
CAD |
CAE |
181.0 |
180.0 |
| CAD |
CAC |
CAA |
HAC |
240.1 |
240.0 |
| CAD |
CAC |
CAA |
HACA |
119.9 |
120.0 |
| CAA |
CAC |
CAD |
HAD |
301.3 |
300.0 |
| CAA |
CAC |
CAD |
HADA |
60.7 |
60.0 |
| HAA |
CAA |
CAC |
HAAA |
240.0 |
240.0 |
| HAA |
CAA |
CAC |
HAAB |
119.9 |
120.0 |
| HAAA |
CAA |
CAC |
HAAB |
240.0 |
240.1 |
| HAC |
CAC |
CAA |
HACA |
239.8 |
240.0 |
| NAG |
CAB |
NAI |
CAK |
359.4 |
0.0 |
| NAI |
CAB |
NAG |
HAB |
180.0 |
180.2 |
| CAB |
NAG |
NAH |
CAK |
359.1 |
0.0 |
| CAB |
NAG |
NAH |
HNAH |
179.1 |
180.0 |
| NAI |
CAB |
NAG |
NAH |
0.9 |
360.0 |
| NAG |
CAB |
NAI |
HAB |
180.0 |
179.8 |
| NAH |
CAK |
NAI |
CAB |
0.0 |
0.0 |
| CAB |
NAI |
CAK |
SAJ |
181.6 |
180.0 |
| CAD |
CAC |
CAA |
HAA |
180.0 |
300.0 |
| CAD |
CAC |
CAA |
HAAA |
300.0 |
60.0 |
| CAD |
CAC |
CAA |
HAAB |
60.0 |
179.9 |
| CAA |
CAC |
CAD |
HAC |
119.9 |
120.0 |
| CAA |
CAC |
CAD |
HACA |
240.1 |
240.0 |
| CAC |
CAD |
CAE |
CAF |
205.4 |
180.0 |
| CAE |
CAD |
CAC |
HAD |
239.7 |
239.9 |
| CAE |
CAD |
CAC |
HADA |
120.3 |
120.0 |
| CAC |
CAD |
CAE |
HAE |
325.1 |
300.0 |
| CAC |
CAD |
CAE |
HAEA |
85.7 |
60.1 |
| HAC |
CAC |
CAD |
HACA |
120.3 |
120.0 |
| HAD |
CAD |
CAC |
HADA |
240.6 |
240.0 |
| CAE |
CAD |
CAC |
HAC |
61.1 |
59.9 |
| CAE |
CAD |
CAC |
HACA |
300.9 |
300.0 |
| CAC |
CAD |
CAE |
HAD |
120.3 |
120.0 |
| CAC |
CAD |
CAE |
HADA |
239.7 |
240.1 |
| CAD |
CAE |
CAF |
SAJ |
260.8 |
180.0 |
| CAF |
CAE |
CAD |
HAE |
240.3 |
240.0 |
| CAF |
CAE |
CAD |
HAEA |
119.7 |
119.9 |
| CAD |
CAE |
CAF |
HAF |
21.3 |
300.1 |
| CAD |
CAE |
CAF |
HAFA |
140.3 |
60.0 |
| HAD |
CAD |
CAE |
HADA |
119.4 |
120.0 |
| HAE |
CAE |
CAD |
HAEA |
239.4 |
240.0 |
| CAF |
CAE |
CAD |
HAD |
85.1 |
60.0 |
| CAF |
CAE |
CAD |
HADA |
325.7 |
299.9 |
| CAD |
CAE |
CAF |
HAE |
119.7 |
120.1 |
| CAD |
CAE |
CAF |
HAEA |
240.3 |
240.0 |
| CAE |
CAF |
SAJ |
CAK |
163.1 |
180.0 |
| SAJ |
CAF |
CAE |
HAF |
239.5 |
240.0 |
| SAJ |
CAF |
CAE |
HAFA |
120.5 |
120.0 |
| HAE |
CAE |
CAF |
HAEA |
120.6 |
120.0 |
| HAF |
CAF |
CAE |
HAFA |
241.0 |
240.0 |
| SAJ |
CAF |
CAE |
HAE |
141.1 |
60.0 |
| SAJ |
CAF |
CAE |
HAEA |
20.5 |
300.0 |
| CAE |
CAF |
SAJ |
HAF |
120.5 |
120.0 |
| CAE |
CAF |
SAJ |
HAFA |
239.5 |
240.0 |
| NAH |
CAK |
SAJ |
CAF |
165.1 |
180.0 |
| NAI |
CAK |
SAJ |
CAF |
343.4 |
360.0 |
| HAF |
CAF |
SAJ |
HAFA |
119.0 |
120.0 |
| NAH |
NAG |
CAB |
NAI |
0.9 |
360.0 |
| NAH |
NAG |
CAB |
HAB |
180.9 |
179.8 |
| NAG |
NAH |
CAK |
NAI |
0.5 |
360.0 |
| NAG |
NAH |
CAK |
SAJ |
179.0 |
180.0 |
| CAK |
NAH |
NAG |
HNAH |
180.0 |
180.1 |
| CAB |
NAI |
CAK |
NAH |
0.0 |
0.0 |
| CAF |
SAJ |
CAK |
NAH |
165.1 |
180.0 |
| NAG |
NAH |
CAK |
HNAH |
180.0 |
179.9 |
| NAI |
CAK |
NAH |
SAJ |
181.5 |
180.0 |
| CAK |
NAI |
CAB |
HAB |
179.4 |
180.2 |
| CAF |
SAJ |
CAK |
NAI |
343.4 |
360.0 |
| NAH |
CAK |
NAI |
SAJ |
178.5 |
180.0 |
| NAI |
CAK |
NAH |
HNAH |
180.6 |
180.0 |
| CAK |
SAJ |
CAF |
HAF |
42.6 |
60.0 |
| CAK |
SAJ |
CAF |
HAFA |
283.6 |
300.0 |
| NAH |
CAK |
SAJ |
NAI |
181.7 |
180.0 |
| SAJ |
CAK |
NAH |
HNAH |
359.1 |
0.0 |
| HAA |
CAA |
CAC |
CAD |
180.0 |
300.0 |
| CAC |
CAA |
HAA |
HAAA |
120.0 |
120.0 |
| CAC |
CAA |
HAA |
HAAB |
240.0 |
240.0 |
| HAA |
CAA |
CAC |
HAC |
299.8 |
60.0 |
| HAA |
CAA |
CAC |
HACA |
60.1 |
180.0 |
| HAAA |
CAA |
HAA |
HAAB |
120.0 |
119.9 |
| HAAA |
CAA |
CAC |
CAD |
300.0 |
60.0 |
| CAC |
CAA |
HAAA |
HAA |
240.0 |
239.9 |
| CAC |
CAA |
HAAA |
HAAB |
120.0 |
120.0 |
| HAAA |
CAA |
CAC |
HAC |
59.9 |
180.0 |
| HAAA |
CAA |
CAC |
HACA |
180.1 |
300.1 |
| HAA |
CAA |
HAAA |
HAAB |
240.1 |
240.0 |
| HAAB |
CAA |
CAC |
CAD |
60.0 |
179.9 |
| CAC |
CAA |
HAAB |
HAA |
120.0 |
120.1 |
| CAC |
CAA |
HAAB |
HAAA |
240.0 |
240.0 |
| HAAB |
CAA |
CAC |
HAC |
179.9 |
300.0 |
| HAAB |
CAA |
CAC |
HACA |
300.1 |
60.0 |
| HAA |
CAA |
HAAB |
HAAA |
120.0 |
120.0 |
| NAG |
CAB |
HAB |
NAI |
180.0 |
180.2 |
| HAB |
CAB |
NAG |
NAH |
180.9 |
179.8 |
| HAB |
CAB |
NAI |
CAK |
179.4 |
180.2 |
| CAA |
CAC |
HAC |
CAD |
240.8 |
240.0 |
| HAC |
CAC |
CAA |
HAA |
299.8 |
60.0 |
| HAC |
CAC |
CAA |
HAAA |
59.9 |
180.0 |
| HAC |
CAC |
CAA |
HAAB |
179.9 |
300.0 |
| CAA |
CAC |
HAC |
HACA |
120.3 |
120.0 |
| HAC |
CAC |
CAD |
CAE |
61.1 |
59.9 |
| CAD |
CAC |
HAC |
HACA |
239.6 |
240.1 |
| HAC |
CAC |
CAD |
HAD |
181.5 |
180.0 |
| HAC |
CAC |
CAD |
HADA |
300.8 |
300.0 |
| CAA |
CAC |
HACA |
CAD |
119.2 |
120.0 |
| HACA |
CAC |
CAA |
HAA |
60.1 |
180.0 |
| HACA |
CAC |
CAA |
HAAA |
180.1 |
300.1 |
| HACA |
CAC |
CAA |
HAAB |
300.1 |
60.0 |
| CAA |
CAC |
HACA |
HAC |
239.7 |
240.0 |
| HACA |
CAC |
CAD |
CAE |
300.9 |
300.0 |
| CAD |
CAC |
HACA |
HAC |
120.4 |
120.0 |
| HACA |
CAC |
CAD |
HAD |
61.2 |
60.0 |
| HACA |
CAC |
CAD |
HADA |
180.6 |
180.0 |
| CAC |
CAD |
HAD |
CAE |
238.0 |
240.0 |
| HAD |
CAD |
CAC |
HAC |
181.5 |
180.0 |
| HAD |
CAD |
CAC |
HACA |
61.2 |
60.0 |
| CAC |
CAD |
HAD |
HADA |
119.0 |
119.9 |
| HAD |
CAD |
CAE |
CAF |
85.1 |
60.0 |
| CAE |
CAD |
HAD |
HADA |
241.0 |
240.0 |
| HAD |
CAD |
CAE |
HAE |
204.8 |
180.0 |
| HAD |
CAD |
CAE |
HAEA |
325.4 |
300.0 |
| CAC |
CAD |
HADA |
CAE |
122.0 |
120.0 |
| HADA |
CAD |
CAC |
HAC |
300.8 |
300.0 |
| HADA |
CAD |
CAC |
HACA |
180.6 |
180.0 |
| CAC |
CAD |
HADA |
HAD |
241.0 |
240.0 |
| HADA |
CAD |
CAE |
CAF |
325.7 |
299.9 |
| CAE |
CAD |
HADA |
HAD |
119.0 |
120.1 |
| HADA |
CAD |
CAE |
HAE |
85.4 |
60.0 |
| HADA |
CAD |
CAE |
HAEA |
206.0 |
180.0 |
| CAD |
CAE |
HAE |
CAF |
241.9 |
240.0 |
| HAE |
CAE |
CAD |
HAD |
204.8 |
180.0 |
| HAE |
CAE |
CAD |
HADA |
85.4 |
60.0 |
| CAD |
CAE |
HAE |
HAEA |
121.0 |
120.0 |
| HAE |
CAE |
CAF |
SAJ |
141.1 |
60.0 |
| CAF |
CAE |
HAE |
HAEA |
239.0 |
240.1 |
| HAE |
CAE |
CAF |
HAF |
261.7 |
180.0 |
| HAE |
CAE |
CAF |
HAFA |
20.7 |
300.0 |
| CAD |
CAE |
HAEA |
CAF |
118.1 |
120.0 |
| HAEA |
CAE |
CAD |
HAD |
325.4 |
300.0 |
| HAEA |
CAE |
CAD |
HADA |
206.0 |
180.0 |
| CAD |
CAE |
HAEA |
HAE |
239.0 |
239.9 |
| HAEA |
CAE |
CAF |
SAJ |
20.5 |
300.0 |
| CAF |
CAE |
HAEA |
HAE |
121.0 |
120.0 |
| HAEA |
CAE |
CAF |
HAF |
141.0 |
60.0 |
| HAEA |
CAE |
CAF |
HAFA |
260.0 |
180.0 |
| CAE |
CAF |
HAF |
SAJ |
237.0 |
239.9 |
| HAF |
CAF |
CAE |
HAE |
261.7 |
180.0 |
| HAF |
CAF |
CAE |
HAEA |
141.0 |
60.0 |
| CAE |
CAF |
HAF |
HAFA |
118.5 |
119.9 |
| HAF |
CAF |
SAJ |
CAK |
42.6 |
60.0 |
| SAJ |
CAF |
HAF |
HAFA |
241.5 |
240.0 |
| CAE |
CAF |
HAFA |
SAJ |
123.0 |
120.0 |
| HAFA |
CAF |
CAE |
HAE |
20.7 |
300.0 |
| HAFA |
CAF |
CAE |
HAEA |
260.0 |
180.0 |
| CAE |
CAF |
HAFA |
HAF |
241.5 |
240.0 |
| HAFA |
CAF |
SAJ |
CAK |
283.6 |
300.0 |
| SAJ |
CAF |
HAFA |
HAF |
118.5 |
120.0 |
| NAG |
NAH |
HNAH |
CAK |
180.0 |
180.1 |
| HNAH |
NAH |
CAK |
NAI |
180.6 |
180.0 |
| HNAH |
NAH |
CAK |
SAJ |
359.1 |
0.0 |