PDB Chemical Component C9E

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for C9E

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C5 C6 1.396 1.383
C5 N1 1.344 1.316
C6 C8 1.417 1.397
O2 C4 1.231 1.215
N1 C1 1.344 1.324
C8 C4 1.516 1.476
C8 C9 1.404 1.410
C4 O1 1.387 1.347
C1 C9 1.433 1.410
C1 N2 1.362 1.375
C9 C7 1.441 1.459
O1 C3 1.425 1.453
C3 C2 1.524 1.530
N2 C10 1.373 1.367
C7 C10 1.397 1.346
C2 H1 1.100 1.090
C2 H2 1.100 1.090
C2 H3 1.100 1.091
C3 H4 1.100 1.090
C3 H5 1.100 1.090
C7 H6 1.080 1.079
C10 H7 1.079 1.080
N2 H8 1.000 0.970
C5 H9 1.080 1.080
C6 H10 1.080 1.080

Bond Angles for C9E

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C6 C5 H9 118.5 119.1
C5 C6 H10 118.6 120.4
C6 C8 C4 124.1 121.2
O2 C4 O1 113.4 120.0
N1 C1 N2 124.7 133.2
C9 C8 C4 120.6 121.1
C8 C4 O1 123.2 120.0
C1 C9 C8 116.9 119.3
C9 C1 N2 107.5 106.9
C1 C9 C7 105.9 106.3
C1 N2 C10 111.2 110.0
C1 N2 H8 124.4 125.0
C9 C7 C10 107.7 106.8
C9 C7 H6 126.1 126.6
O1 C3 H4 109.2 109.4
O1 C3 H5 109.2 109.5
C3 C2 H1 109.5 109.5
C3 C2 H2 109.5 109.5
C3 C2 H3 109.5 109.5
N2 C10 H7 126.1 125.1
C10 C7 H6 126.2 126.6
C7 C10 H7 126.2 125.0
H1 C2 H2 109.4 109.5
H1 C2 H3 109.5 109.5
H2 C2 H3 109.5 109.4
H4 C3 H5 109.5 109.4

Torsion Angles for C9E

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C5 C6 C8 C4 178.2 180.0
C9 C8 C6 C4 179.9 180.3
C6 C8 C4 O1 217.3 0.3
C8 C4 O2 O1 210.9 179.9
C9 C1 N1 N2 182.0 179.7
N1 C1 N2 C10 180.6 179.7
N1 C1 N2 H8 0.5 359.7
O2 C4 C8 O1 145.7 180.1
C1 C9 C8 C4 182.2 180.0
C6 C8 C9 C4 180.1 179.7
C9 C8 C4 O1 37.4 180.0
C8 C9 C1 N2 178.8 179.9
C1 C9 C8 C7 183.9 180.2
C8 C9 C7 C10 182.2 180.1
C8 C9 C7 H6 2.2 0.1
C4 O1 C3 H4 264.3 60.1
C4 O1 C3 H5 23.9 300.1
N1 C1 C9 N2 178.2 180.2
C9 C1 N2 C10 358.9 360.0
C9 C1 N2 H8 178.8 179.9
C1 C9 C7 C10 358.6 359.9
C1 C9 C7 H6 178.6 180.0
N2 C1 C9 C8 178.8 179.9
N2 C1 C9 C7 1.5 0.1
C1 N2 C10 H7 180.3 180.0
C1 C9 C7 C8 176.4 179.8
C7 C9 C1 N2 1.5 0.1
C10 C7 C9 H6 180.0 180.0
C9 C7 C10 H7 180.7 180.0
O1 C3 C2 H1 180.0 300.0
O1 C3 C2 H2 300.0 60.1
O1 C3 C2 H3 60.0 180.0
H4 C3 O1 H5 240.3 120.0
H1 C2 C3 H2 240.0 239.9
H1 C2 C3 H3 120.0 120.0
H2 C2 C3 H3 240.0 240.1
C1 N2 C10 H8 180.0 180.0
N2 C10 C7 H6 180.7 180.0
C7 C10 N2 H7 180.0 180.0
C1 N2 C10 C7 0.3 0.0
C9 C7 C10 H6 180.0 180.0
N2 C10 C7 H7 180.0 180.0
C3 C2 H1 H2 120.0 120.0
C3 C2 H1 H3 240.0 240.0
H2 C2 H1 H3 120.0 120.0
C3 C2 H2 H1 240.0 240.0
C3 C2 H2 H3 120.0 120.0
H1 C2 H2 H3 240.0 240.0
C3 C2 H3 H1 120.0 120.0
C3 C2 H3 H2 240.0 240.0
H1 C2 H3 H2 120.0 120.0
O1 C3 H4 H5 119.5 240.0
H4 C3 C2 H1 59.8 59.9
H4 C3 C2 H2 179.8 180.0
H4 C3 C2 H3 299.9 299.9
O1 C3 H5 H4 240.5 119.9
H5 C3 C2 H1 300.2 179.9
H5 C3 C2 H2 60.2 300.0
H5 C3 C2 H3 180.2 59.9
C9 C7 H6 C10 180.0 180.0
H6 C7 C10 H7 0.7 0.0
H7 C10 C7 H6 0.7 0.0
C1 N2 H8 C10 180.0 180.0
H8 N2 C10 H7 0.3 0.0
H9 C5 C6 H10 1.7 0.3
H10 C6 C5 H9 1.7 0.3
H10 C6 C8 C4 358.2 359.8