PDB Chemical Component C8U
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for C8U
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| F20 |
C18 |
1.356 |
1.399 |
| O10 |
N09 |
1.170 |
1.219 |
| F19 |
C18 |
1.353 |
1.399 |
| C16 |
C15 |
1.378 |
1.382 |
| C16 |
C17 |
1.384 |
1.382 |
| C18 |
C17 |
1.525 |
1.508 |
| C18 |
F21 |
1.358 |
1.399 |
| C15 |
C14 |
1.379 |
1.383 |
| C17 |
C12 |
1.389 |
1.383 |
| N09 |
O11 |
1.400 |
1.217 |
| N09 |
C05 |
1.450 |
1.480 |
| C14 |
C13 |
1.381 |
1.382 |
| C12 |
C13 |
1.384 |
1.383 |
| C12 |
C04 |
1.524 |
1.507 |
| C05 |
C04 |
1.526 |
1.502 |
| C05 |
C06 |
1.524 |
1.314 |
| C08 |
C06 |
1.526 |
1.507 |
| C04 |
C03 |
1.526 |
1.502 |
| C06 |
N07 |
1.445 |
1.387 |
| C03 |
C22 |
1.522 |
1.412 |
| C03 |
C02 |
1.521 |
1.347 |
| N07 |
C02 |
1.446 |
1.365 |
| O24 |
C25 |
1.396 |
1.429 |
| O24 |
C22 |
1.393 |
1.349 |
| C22 |
O23 |
1.178 |
1.218 |
| C02 |
C01 |
1.525 |
1.507 |
| C13 |
H1 |
1.080 |
1.080 |
| C15 |
H2 |
1.081 |
1.080 |
| C01 |
H3 |
1.100 |
1.089 |
| C01 |
H4 |
1.100 |
1.091 |
| C01 |
H5 |
1.100 |
1.090 |
| C04 |
H6 |
1.100 |
1.089 |
| N07 |
H9 |
1.001 |
0.970 |
| C08 |
H10 |
1.100 |
1.091 |
| C08 |
H11 |
1.100 |
1.090 |
| C08 |
H12 |
1.100 |
1.090 |
| C14 |
H13 |
1.080 |
1.080 |
| C16 |
H14 |
1.080 |
1.080 |
| C25 |
H15 |
1.100 |
1.090 |
| C25 |
H16 |
1.100 |
1.090 |
| C25 |
H17 |
1.100 |
1.090 |
Bond Angles for C8U
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| F20 |
C18 |
F21 |
109.9 |
109.5 |
| O10 |
N09 |
O11 |
119.6 |
120.0 |
| F19 |
C18 |
F21 |
108.1 |
109.5 |
| C16 |
C15 |
H2 |
120.0 |
120.0 |
| C14 |
C15 |
H2 |
120.0 |
120.0 |
| C15 |
C14 |
H13 |
120.0 |
120.0 |
| C17 |
C12 |
C04 |
121.8 |
120.0 |
| C14 |
C13 |
H1 |
119.8 |
120.0 |
| C12 |
C13 |
H1 |
119.8 |
120.0 |
| C12 |
C04 |
H6 |
109.5 |
109.2 |
| C05 |
C04 |
H6 |
109.5 |
109.2 |
| C05 |
C06 |
N07 |
119.7 |
121.0 |
| C06 |
N07 |
H9 |
119.9 |
120.0 |
| C03 |
C22 |
O23 |
120.1 |
120.0 |
| O24 |
C25 |
H15 |
109.5 |
109.5 |
| O24 |
C25 |
H16 |
109.4 |
109.5 |
| O24 |
C25 |
H17 |
109.4 |
109.5 |
| C02 |
C01 |
H3 |
109.5 |
109.5 |
| C02 |
C01 |
H4 |
109.5 |
109.5 |
| C02 |
C01 |
H5 |
109.5 |
109.5 |
| H3 |
C01 |
H4 |
109.5 |
109.5 |
| H3 |
C01 |
H5 |
109.4 |
109.4 |
| H4 |
C01 |
H5 |
109.5 |
109.4 |
| H10 |
C08 |
H11 |
109.5 |
109.4 |
| H10 |
C08 |
H12 |
109.5 |
109.4 |
| H11 |
C08 |
H12 |
109.4 |
109.5 |
| H15 |
C25 |
H16 |
109.5 |
109.5 |
| H15 |
C25 |
H17 |
109.5 |
109.4 |
| H16 |
C25 |
H17 |
109.5 |
109.5 |
Torsion Angles for C8U
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| F19 |
C18 |
F20 |
F21 |
118.1 |
239.9 |
| F20 |
C18 |
F19 |
F21 |
240.8 |
120.0 |
| C14 |
C15 |
C16 |
H2 |
180.0 |
180.0 |
| C16 |
C15 |
C14 |
H13 |
180.2 |
180.1 |
| C17 |
C16 |
C15 |
H2 |
179.8 |
180.2 |
| C16 |
C15 |
C14 |
H2 |
180.0 |
180.0 |
| C15 |
C14 |
C13 |
H1 |
179.7 |
180.0 |
| C17 |
C12 |
C13 |
H1 |
180.4 |
180.0 |
| C17 |
C12 |
C04 |
H6 |
356.6 |
0.7 |
| N09 |
C05 |
C04 |
H6 |
344.7 |
316.5 |
| C12 |
C13 |
C14 |
H1 |
180.0 |
179.8 |
| C14 |
C13 |
C12 |
H1 |
180.0 |
180.2 |
| C04 |
C12 |
C13 |
H1 |
0.1 |
0.0 |
| C05 |
C04 |
C12 |
H6 |
244.6 |
240.7 |
| C17 |
C12 |
C04 |
C05 |
241.1 |
241.4 |
| C12 |
C04 |
C05 |
H6 |
115.5 |
119.3 |
| C06 |
C05 |
C04 |
H6 |
149.0 |
136.5 |
| C05 |
C06 |
N07 |
H9 |
158.5 |
162.3 |
| C08 |
C06 |
N07 |
H9 |
350.7 |
342.0 |
| C17 |
C12 |
C04 |
C03 |
120.1 |
120.0 |
| C04 |
C03 |
C22 |
O23 |
223.8 |
280.5 |
| C02 |
C03 |
C22 |
O23 |
46.7 |
100.5 |
| C03 |
C02 |
C01 |
H3 |
180.0 |
94.2 |
| C03 |
C02 |
C01 |
H4 |
300.0 |
214.2 |
| C03 |
C02 |
C01 |
H5 |
60.0 |
334.2 |
| N07 |
C02 |
C01 |
H3 |
341.1 |
274.0 |
| N07 |
C02 |
C01 |
H4 |
101.1 |
34.1 |
| N07 |
C02 |
C01 |
H5 |
221.1 |
154.0 |
| H15 |
C25 |
O24 |
H16 |
240.0 |
240.0 |
| H15 |
C25 |
O24 |
H17 |
120.0 |
120.0 |
| H16 |
C25 |
O24 |
H17 |
240.0 |
240.0 |
| H3 |
C01 |
C02 |
H4 |
240.0 |
240.0 |
| H3 |
C01 |
C02 |
H5 |
120.0 |
120.0 |
| H4 |
C01 |
C02 |
H5 |
240.0 |
240.0 |
| H2 |
C15 |
C14 |
H13 |
0.2 |
0.0 |
| C02 |
C01 |
H3 |
H4 |
120.0 |
120.0 |
| C02 |
C01 |
H3 |
H5 |
240.0 |
240.0 |
| H4 |
C01 |
H3 |
H5 |
120.0 |
119.9 |
| C02 |
C01 |
H4 |
H3 |
240.0 |
240.0 |
| C02 |
C01 |
H4 |
H5 |
120.0 |
120.0 |
| H3 |
C01 |
H4 |
H5 |
240.0 |
240.1 |
| C02 |
C01 |
H5 |
H3 |
120.0 |
120.0 |
| C02 |
C01 |
H5 |
H4 |
240.0 |
240.0 |
| H3 |
C01 |
H5 |
H4 |
120.0 |
120.0 |
| H11 |
C08 |
H10 |
H12 |
120.0 |
120.0 |
| H10 |
C08 |
H11 |
H12 |
240.0 |
240.0 |
| H10 |
C08 |
H12 |
H11 |
120.0 |
120.0 |
| H13 |
C14 |
C15 |
H2 |
0.2 |
0.0 |
| H13 |
C14 |
C13 |
H1 |
359.7 |
359.9 |
| H14 |
C16 |
C15 |
H2 |
359.8 |
0.0 |
| O24 |
C25 |
H15 |
H16 |
120.0 |
120.0 |
| O24 |
C25 |
H15 |
H17 |
240.0 |
240.0 |
| H16 |
C25 |
H15 |
H17 |
120.0 |
120.0 |
| O24 |
C25 |
H16 |
H15 |
240.0 |
240.0 |
| O24 |
C25 |
H16 |
H17 |
120.0 |
120.0 |
| H15 |
C25 |
H16 |
H17 |
240.0 |
240.0 |
| O24 |
C25 |
H17 |
H15 |
120.0 |
120.0 |
| O24 |
C25 |
H17 |
H16 |
240.0 |
240.0 |
| H15 |
C25 |
H17 |
H16 |
120.0 |
120.0 |