PDB Chemical Component C87
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for C87
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N27 |
C26 |
1.141 |
1.135 |
C26 |
C25 |
1.472 |
1.472 |
C25 |
N24 |
1.456 |
1.465 |
O23 |
C22 |
1.233 |
1.216 |
N24 |
C22 |
1.340 |
1.347 |
C22 |
C19 |
1.497 |
1.479 |
C19 |
C20 |
1.394 |
1.396 |
C19 |
C18 |
1.393 |
1.397 |
C20 |
C21 |
1.383 |
1.377 |
C18 |
C17 |
1.384 |
1.377 |
C21 |
C16 |
1.394 |
1.394 |
C17 |
C16 |
1.399 |
1.395 |
C16 |
C12 |
1.489 |
1.483 |
C12 |
C11 |
1.385 |
1.397 |
C12 |
N13 |
1.345 |
1.331 |
C9 |
C31 |
1.494 |
1.530 |
C9 |
N8 |
1.465 |
1.470 |
C11 |
C10 |
1.380 |
1.385 |
C31 |
O30 |
1.414 |
1.431 |
N13 |
C14 |
1.351 |
1.324 |
O30 |
C29 |
1.408 |
1.430 |
C5 |
C6 |
1.378 |
1.381 |
C5 |
C4 |
1.399 |
1.388 |
C10 |
N15 |
1.337 |
1.323 |
C6 |
C1 |
1.391 |
1.389 |
C14 |
N15 |
1.335 |
1.325 |
C14 |
N7 |
1.353 |
1.385 |
N8 |
C4 |
1.405 |
1.399 |
N8 |
C28 |
1.466 |
1.470 |
C4 |
C3 |
1.399 |
1.389 |
C1 |
N7 |
1.396 |
1.401 |
C1 |
C2 |
1.388 |
1.388 |
C28 |
C29 |
1.495 |
1.531 |
C3 |
C2 |
1.379 |
1.381 |
N24 |
H1 |
0.999 |
0.970 |
C25 |
H2 |
1.100 |
1.090 |
C25 |
H3 |
1.100 |
1.090 |
C18 |
H4 |
1.080 |
1.080 |
C17 |
H5 |
1.080 |
1.080 |
C21 |
H6 |
1.080 |
1.080 |
C20 |
H7 |
1.080 |
1.080 |
C11 |
H8 |
1.080 |
1.080 |
C10 |
H9 |
1.080 |
1.080 |
N7 |
H10 |
1.000 |
0.970 |
C2 |
H11 |
1.080 |
1.080 |
C3 |
H12 |
1.080 |
1.080 |
C5 |
H13 |
1.080 |
1.080 |
C6 |
H14 |
1.080 |
1.080 |
C28 |
H15 |
1.100 |
1.090 |
C28 |
H16 |
1.100 |
1.090 |
C29 |
H17 |
1.100 |
1.090 |
C29 |
H18 |
1.101 |
1.090 |
C31 |
H19 |
1.100 |
1.091 |
C31 |
H20 |
1.100 |
1.090 |
C9 |
H21 |
1.100 |
1.091 |
C9 |
H22 |
1.100 |
1.090 |
Bond Angles for C87
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C26 |
C25 |
H2 |
109.2 |
109.5 |
C26 |
C25 |
H3 |
109.2 |
109.4 |
C25 |
N24 |
H1 |
119.4 |
120.0 |
O23 |
C22 |
C19 |
120.3 |
120.0 |
N24 |
C22 |
C19 |
117.6 |
120.0 |
C22 |
C19 |
C20 |
122.9 |
120.1 |
C22 |
C19 |
C18 |
118.7 |
120.0 |
C18 |
C19 |
C20 |
118.2 |
119.9 |
C19 |
C20 |
C21 |
120.9 |
120.0 |
C19 |
C20 |
H7 |
119.6 |
119.9 |
C19 |
C18 |
C17 |
120.7 |
120.0 |
C19 |
C18 |
H4 |
119.6 |
120.0 |
C20 |
C21 |
H6 |
119.3 |
120.0 |
C18 |
C17 |
C16 |
121.4 |
120.0 |
C17 |
C18 |
H4 |
119.6 |
120.1 |
C18 |
C17 |
H5 |
119.3 |
120.0 |
C21 |
C16 |
C12 |
120.8 |
120.0 |
C17 |
C16 |
C12 |
121.6 |
120.0 |
C16 |
C17 |
H5 |
119.3 |
120.0 |
C16 |
C12 |
C11 |
122.5 |
120.5 |
C16 |
C12 |
N13 |
116.3 |
120.5 |
C11 |
C12 |
N13 |
121.1 |
119.0 |
C12 |
C11 |
C10 |
116.9 |
118.4 |
C12 |
C11 |
H8 |
121.6 |
120.8 |
C12 |
N13 |
C14 |
116.7 |
120.5 |
C9 |
C31 |
H19 |
109.2 |
109.6 |
C9 |
C31 |
H20 |
109.2 |
109.6 |
C11 |
C10 |
N15 |
123.9 |
119.3 |
C10 |
C11 |
H8 |
121.6 |
120.8 |
C11 |
C10 |
H9 |
118.0 |
120.3 |
N13 |
C14 |
N7 |
120.1 |
119.1 |
O30 |
C29 |
H17 |
109.1 |
109.5 |
O30 |
C29 |
H18 |
109.1 |
109.5 |
C6 |
C5 |
H13 |
119.7 |
120.0 |
C5 |
C6 |
H14 |
119.8 |
120.0 |
N15 |
C10 |
H9 |
118.1 |
120.4 |
C14 |
N7 |
H10 |
115.1 |
120.0 |
N8 |
C28 |
C29 |
109.4 |
109.3 |
N8 |
C28 |
H15 |
109.5 |
109.5 |
N8 |
C28 |
H16 |
109.5 |
109.5 |
C4 |
C3 |
H12 |
119.6 |
120.0 |
C1 |
N7 |
H10 |
115.1 |
120.0 |
C1 |
C2 |
H11 |
119.8 |
120.0 |
C29 |
C28 |
H15 |
109.5 |
109.5 |
C29 |
C28 |
H16 |
109.5 |
109.5 |
C28 |
C29 |
H17 |
109.2 |
109.6 |
C28 |
C29 |
H18 |
109.1 |
109.5 |
C3 |
C2 |
H11 |
119.8 |
120.0 |
H2 |
C25 |
H3 |
109.5 |
109.5 |
H15 |
C28 |
H16 |
109.4 |
109.5 |
H17 |
C29 |
H18 |
109.5 |
109.6 |
H19 |
C31 |
H20 |
109.5 |
109.5 |
H21 |
C9 |
H22 |
109.5 |
109.5 |
Torsion Angles for C87
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N27 |
C26 |
C25 |
H2 |
102.3 |
246.3 |
N27 |
C26 |
C25 |
H3 |
221.9 |
126.4 |
C26 |
C25 |
N24 |
H1 |
258.6 |
0.0 |
H2 |
C25 |
C26 |
H3 |
240.4 |
120.0 |
C25 |
N24 |
C22 |
C19 |
188.6 |
180.3 |
N24 |
C22 |
O23 |
C19 |
180.9 |
180.3 |
O23 |
C22 |
C19 |
C20 |
190.7 |
360.0 |
O23 |
C22 |
C19 |
C18 |
4.7 |
180.3 |
O23 |
C22 |
N24 |
C19 |
179.1 |
179.7 |
N24 |
C22 |
C19 |
C20 |
9.8 |
179.7 |
N24 |
C22 |
C19 |
C18 |
183.8 |
360.0 |
C18 |
C19 |
C22 |
C20 |
174.0 |
180.3 |
C22 |
C19 |
C20 |
C21 |
173.4 |
179.6 |
C22 |
C19 |
C20 |
H7 |
353.3 |
0.0 |
C22 |
C19 |
C18 |
C17 |
187.7 |
180.0 |
C22 |
C19 |
C18 |
H4 |
7.7 |
360.0 |
C22 |
C19 |
C20 |
C18 |
174.1 |
180.3 |
C20 |
C19 |
C18 |
C17 |
2.1 |
0.3 |
C20 |
C19 |
C18 |
H4 |
182.1 |
180.3 |
C19 |
C20 |
C21 |
H6 |
179.9 |
180.3 |
C22 |
C19 |
C18 |
C20 |
185.7 |
179.7 |
C18 |
C19 |
C20 |
C21 |
359.3 |
359.4 |
C18 |
C19 |
C20 |
H7 |
179.3 |
179.7 |
C19 |
C18 |
C17 |
C16 |
357.3 |
360.0 |
C17 |
C18 |
C19 |
H4 |
180.0 |
180.0 |
C19 |
C18 |
C17 |
H5 |
177.3 |
180.0 |
C19 |
C20 |
C21 |
H7 |
180.0 |
180.4 |
C20 |
C21 |
C16 |
C12 |
174.6 |
179.7 |
C17 |
C18 |
C19 |
C20 |
2.1 |
0.3 |
C19 |
C18 |
C17 |
H4 |
180.0 |
180.0 |
C18 |
C17 |
C16 |
C12 |
186.8 |
179.9 |
C16 |
C17 |
C18 |
H5 |
180.0 |
180.0 |
C19 |
C20 |
C21 |
C16 |
359.9 |
0.7 |
C17 |
C16 |
C21 |
C12 |
184.9 |
179.9 |
C21 |
C16 |
C17 |
H5 |
181.8 |
180.1 |
C21 |
C16 |
C12 |
C11 |
173.1 |
359.9 |
C21 |
C16 |
C12 |
N13 |
352.1 |
179.7 |
C16 |
C17 |
C18 |
H4 |
177.3 |
180.0 |
C18 |
C17 |
C16 |
H5 |
180.0 |
180.0 |
C21 |
C16 |
C17 |
C12 |
175.0 |
180.1 |
C17 |
C16 |
C12 |
C11 |
348.0 |
180.0 |
C17 |
C16 |
C12 |
N13 |
167.0 |
359.8 |
C12 |
C16 |
C17 |
H5 |
6.8 |
359.9 |
C11 |
C12 |
C16 |
N13 |
181.0 |
180.2 |
C16 |
C12 |
C11 |
C10 |
180.1 |
180.1 |
C16 |
C12 |
C11 |
H8 |
0.1 |
0.0 |
C16 |
C12 |
N13 |
C14 |
181.1 |
179.7 |
C16 |
C12 |
C11 |
N13 |
179.0 |
179.8 |
C11 |
C12 |
N13 |
C14 |
0.2 |
359.5 |
C12 |
C11 |
C10 |
N15 |
0.1 |
0.0 |
C10 |
C11 |
C12 |
H8 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
H9 |
180.0 |
180.0 |
C16 |
C12 |
N13 |
C11 |
181.0 |
180.2 |
N13 |
C12 |
C11 |
C10 |
1.1 |
0.3 |
N13 |
C12 |
C11 |
H8 |
181.1 |
180.2 |
C12 |
N13 |
C14 |
N7 |
169.6 |
180.3 |
H19 |
C31 |
C9 |
H20 |
240.3 |
120.2 |
C9 |
N8 |
C28 |
H15 |
67.9 |
61.3 |
C9 |
N8 |
C28 |
H16 |
187.9 |
181.4 |
C10 |
C11 |
C12 |
N13 |
1.1 |
0.3 |
C12 |
C11 |
C10 |
H8 |
180.0 |
180.0 |
N15 |
C10 |
C11 |
H9 |
180.0 |
180.0 |
C31 |
O30 |
C29 |
H17 |
57.5 |
181.4 |
C31 |
O30 |
C29 |
H18 |
177.0 |
61.2 |
N13 |
C14 |
N7 |
H10 |
183.1 |
354.7 |
O30 |
C29 |
C28 |
H15 |
296.7 |
296.9 |
O30 |
C29 |
C28 |
H16 |
176.7 |
176.8 |
C28 |
C29 |
O30 |
H17 |
239.8 |
120.0 |
C28 |
C29 |
O30 |
H18 |
120.2 |
240.1 |
H17 |
C29 |
O30 |
H18 |
240.4 |
120.1 |
C5 |
C4 |
C3 |
H12 |
178.5 |
180.0 |
N15 |
C10 |
C11 |
H8 |
180.1 |
180.1 |
C11 |
C10 |
N15 |
H9 |
180.0 |
180.0 |
C6 |
C1 |
N7 |
H10 |
154.5 |
146.2 |
C6 |
C1 |
C2 |
H11 |
181.3 |
180.3 |
C12 |
N13 |
C14 |
N15 |
357.1 |
0.6 |
C14 |
N15 |
C10 |
H9 |
177.7 |
180.0 |
C1 |
N7 |
C14 |
H10 |
180.0 |
180.1 |
N8 |
C4 |
C3 |
H12 |
357.4 |
0.0 |
C29 |
C28 |
N8 |
H15 |
240.0 |
240.1 |
C29 |
C28 |
N8 |
H16 |
120.0 |
120.0 |
N8 |
C28 |
C29 |
H17 |
296.5 |
176.7 |
N8 |
C28 |
C29 |
H18 |
176.9 |
296.9 |
H15 |
C28 |
N8 |
H16 |
240.0 |
239.9 |
C4 |
C3 |
C2 |
H11 |
180.4 |
180.0 |
C14 |
N7 |
C1 |
H10 |
180.0 |
179.9 |
C2 |
C1 |
N7 |
H10 |
334.2 |
326.4 |
C3 |
C2 |
C1 |
H11 |
180.0 |
179.9 |
O30 |
C29 |
C28 |
H17 |
120.2 |
240.1 |
O30 |
C29 |
C28 |
H18 |
239.8 |
119.9 |
N8 |
C28 |
C29 |
H15 |
120.0 |
119.9 |
N8 |
C28 |
C29 |
H16 |
240.0 |
240.0 |
H15 |
C28 |
C29 |
H16 |
120.0 |
120.0 |
H17 |
C29 |
C28 |
H18 |
119.6 |
239.8 |
C1 |
C2 |
C3 |
H11 |
180.0 |
180.1 |
H1 |
N24 |
C22 |
C19 |
8.6 |
0.3 |
C26 |
C25 |
H2 |
H3 |
119.5 |
240.0 |
H2 |
C25 |
N24 |
H1 |
138.4 |
120.0 |
C26 |
C25 |
H3 |
H2 |
240.6 |
120.0 |
H3 |
C25 |
N24 |
H1 |
18.8 |
240.0 |
H4 |
C18 |
C19 |
C20 |
182.1 |
180.3 |
C19 |
C18 |
H4 |
C17 |
180.0 |
180.0 |
H4 |
C18 |
C17 |
C16 |
177.3 |
180.0 |
H4 |
C18 |
C17 |
H5 |
357.3 |
0.0 |
C18 |
C17 |
H5 |
C16 |
180.0 |
180.0 |
H5 |
C17 |
C18 |
H4 |
357.3 |
0.0 |
H5 |
C17 |
C16 |
C12 |
6.8 |
359.9 |
H6 |
C21 |
C16 |
C12 |
354.6 |
0.1 |
C19 |
C20 |
H7 |
C21 |
180.0 |
179.6 |
H7 |
C20 |
C21 |
H6 |
359.9 |
360.0 |
H8 |
C11 |
C12 |
N13 |
181.1 |
180.2 |
C12 |
C11 |
H8 |
C10 |
180.0 |
180.0 |
H8 |
C11 |
C10 |
N15 |
180.1 |
180.1 |
H8 |
C11 |
C10 |
H9 |
0.1 |
0.1 |
C11 |
C10 |
H9 |
N15 |
180.0 |
180.0 |
H9 |
C10 |
C11 |
H8 |
0.1 |
0.1 |
H12 |
C3 |
C2 |
H11 |
0.3 |
359.9 |
H13 |
C5 |
C6 |
H14 |
0.6 |
359.5 |
H14 |
C6 |
C5 |
H13 |
0.6 |
359.5 |
N8 |
C28 |
H15 |
C29 |
240.1 |
240.2 |
N8 |
C28 |
H15 |
H16 |
120.0 |
120.1 |
C29 |
C28 |
H15 |
H16 |
240.0 |
240.0 |
H15 |
C28 |
C29 |
H17 |
176.5 |
56.8 |
H15 |
C28 |
C29 |
H18 |
56.9 |
176.9 |
N8 |
C28 |
H16 |
C29 |
120.0 |
119.8 |
N8 |
C28 |
H16 |
H15 |
240.0 |
239.9 |
C29 |
C28 |
H16 |
H15 |
120.0 |
120.0 |
H16 |
C28 |
C29 |
H17 |
56.5 |
296.7 |
H16 |
C28 |
C29 |
H18 |
296.9 |
56.9 |
O30 |
C29 |
H17 |
H18 |
119.4 |
239.9 |
H17 |
C29 |
C28 |
H15 |
176.5 |
56.8 |
H17 |
C29 |
C28 |
H16 |
56.5 |
296.7 |
C28 |
C29 |
H17 |
H18 |
240.6 |
120.1 |
O30 |
C29 |
H18 |
H17 |
240.7 |
120.1 |
H18 |
C29 |
C28 |
H15 |
56.9 |
176.9 |
H18 |
C29 |
C28 |
H16 |
296.9 |
56.9 |
C28 |
C29 |
H18 |
H17 |
119.4 |
239.8 |
C9 |
C31 |
H19 |
H20 |
119.5 |
239.8 |
C9 |
C31 |
H20 |
H19 |
240.5 |
120.2 |
H21 |
C9 |
C31 |
H19 |
183.2 |
63.3 |
H21 |
C9 |
C31 |
H20 |
302.9 |
303.2 |
H22 |
C9 |
C31 |
H19 |
303.3 |
303.2 |
H22 |
C9 |
C31 |
H20 |
62.9 |
183.1 |