PDB Chemical Component C81
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for C81
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C28 |
C15 |
1.548 |
1.531 |
N8 |
C15 |
1.462 |
1.465 |
N8 |
C2 |
1.352 |
1.384 |
C15 |
C16 |
1.535 |
1.507 |
C2 |
N1 |
1.348 |
1.325 |
C2 |
N3 |
1.342 |
1.324 |
N1 |
C6 |
1.349 |
1.324 |
N3 |
C4 |
1.342 |
1.328 |
C6 |
C5 |
1.399 |
1.382 |
C16 |
N17 |
1.348 |
1.318 |
C16 |
C21 |
1.396 |
1.383 |
C4 |
C5 |
1.401 |
1.396 |
C4 |
N7 |
1.425 |
1.390 |
C9 |
N7 |
1.453 |
1.471 |
C9 |
C10 |
1.545 |
1.541 |
C9 |
C14 |
1.555 |
1.530 |
N17 |
C18 |
1.350 |
1.317 |
C30 |
C14 |
1.548 |
1.530 |
N7 |
C12 |
1.350 |
1.340 |
C10 |
O11 |
1.435 |
1.457 |
C21 |
C20 |
1.395 |
1.384 |
C14 |
F29 |
1.361 |
1.400 |
C12 |
O11 |
1.335 |
1.337 |
C12 |
O13 |
1.216 |
1.215 |
C18 |
C19 |
1.400 |
1.393 |
C20 |
C19 |
1.408 |
1.398 |
C20 |
C31 |
1.537 |
1.507 |
C19 |
C22 |
1.488 |
1.483 |
C22 |
C27 |
1.399 |
1.397 |
C22 |
C23 |
1.398 |
1.398 |
C27 |
C26 |
1.397 |
1.381 |
C23 |
C24 |
1.396 |
1.380 |
C26 |
N25 |
1.348 |
1.319 |
C24 |
N25 |
1.350 |
1.320 |
C24 |
C32 |
1.527 |
1.507 |
F35 |
C32 |
1.362 |
1.399 |
C32 |
F34 |
1.360 |
1.399 |
C32 |
F33 |
1.359 |
1.399 |
C14 |
H1 |
1.099 |
1.089 |
C15 |
H2 |
1.100 |
1.090 |
C18 |
H3 |
1.080 |
1.080 |
C21 |
H4 |
1.080 |
1.079 |
C23 |
H5 |
1.080 |
1.080 |
C26 |
H6 |
1.080 |
1.080 |
C27 |
H7 |
1.080 |
1.080 |
C28 |
H8 |
1.100 |
1.090 |
C28 |
H9 |
1.100 |
1.091 |
C28 |
H10 |
1.100 |
1.090 |
C30 |
H11 |
1.100 |
1.091 |
C30 |
H12 |
1.100 |
1.090 |
C30 |
H13 |
1.101 |
1.089 |
C10 |
H14 |
1.100 |
1.090 |
C10 |
H15 |
1.100 |
1.090 |
C31 |
H16 |
1.100 |
1.089 |
C31 |
H17 |
1.100 |
1.090 |
C31 |
H18 |
1.100 |
1.090 |
C5 |
H19 |
1.081 |
1.080 |
C6 |
H20 |
1.080 |
1.080 |
C9 |
H21 |
1.100 |
1.090 |
N8 |
H22 |
1.000 |
0.970 |
Bond Angles for C81
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C28 |
C15 |
H2 |
109.4 |
109.5 |
N8 |
C15 |
H2 |
110.6 |
109.5 |
C15 |
C16 |
N17 |
119.3 |
119.5 |
C15 |
C16 |
C21 |
121.2 |
119.4 |
C16 |
C15 |
H2 |
109.6 |
109.5 |
N1 |
C2 |
N3 |
120.2 |
121.6 |
C2 |
N1 |
C6 |
120.5 |
120.9 |
C2 |
N3 |
C4 |
122.1 |
120.7 |
N1 |
C6 |
H20 |
119.9 |
120.4 |
N3 |
C4 |
N7 |
116.5 |
120.5 |
C6 |
C5 |
H19 |
121.0 |
120.8 |
C21 |
C16 |
N17 |
119.5 |
121.1 |
C16 |
N17 |
C18 |
121.6 |
121.9 |
C16 |
C21 |
C20 |
120.7 |
119.2 |
C16 |
C21 |
H4 |
119.6 |
120.4 |
C5 |
C4 |
N7 |
124.6 |
120.5 |
C4 |
C5 |
H19 |
121.0 |
120.7 |
C4 |
N7 |
C9 |
120.2 |
125.6 |
N7 |
C9 |
H21 |
111.3 |
110.6 |
C9 |
C10 |
O11 |
104.6 |
104.0 |
C9 |
C10 |
H14 |
110.7 |
110.8 |
C9 |
C10 |
H15 |
110.7 |
110.3 |
C9 |
C14 |
F29 |
109.9 |
109.5 |
C9 |
C14 |
H1 |
107.4 |
109.5 |
N17 |
C18 |
H3 |
119.5 |
119.7 |
C30 |
C14 |
F29 |
110.2 |
109.5 |
C30 |
C14 |
H1 |
107.5 |
109.5 |
N7 |
C12 |
O11 |
108.2 |
113.9 |
N7 |
C12 |
O13 |
129.3 |
123.0 |
C12 |
O11 |
C10 |
107.8 |
109.5 |
O11 |
C10 |
H14 |
110.7 |
110.5 |
O11 |
C10 |
H15 |
110.7 |
110.5 |
C21 |
C20 |
C31 |
117.7 |
120.9 |
F29 |
C14 |
H1 |
109.9 |
109.4 |
O11 |
C12 |
O13 |
122.6 |
123.1 |
C18 |
C19 |
C22 |
118.3 |
120.6 |
C19 |
C18 |
H3 |
119.5 |
119.7 |
C20 |
C19 |
C22 |
123.0 |
120.5 |
C20 |
C31 |
H16 |
109.5 |
109.5 |
C20 |
C31 |
H17 |
109.5 |
109.4 |
C20 |
C31 |
H18 |
109.4 |
109.5 |
C19 |
C22 |
C27 |
119.0 |
120.9 |
C19 |
C22 |
C23 |
122.5 |
120.9 |
C23 |
C22 |
C27 |
118.5 |
118.2 |
C22 |
C27 |
C26 |
119.6 |
119.0 |
C22 |
C27 |
H7 |
120.1 |
120.6 |
C22 |
C23 |
C24 |
119.7 |
119.1 |
C22 |
C23 |
H5 |
120.2 |
120.4 |
C27 |
C26 |
N25 |
120.4 |
120.9 |
C27 |
C26 |
H6 |
119.8 |
119.5 |
C23 |
C24 |
N25 |
120.3 |
120.8 |
C23 |
C24 |
C32 |
120.1 |
119.6 |
C24 |
C23 |
H5 |
120.1 |
120.5 |
C24 |
N25 |
C26 |
121.4 |
122.0 |
N25 |
C26 |
H6 |
119.8 |
119.6 |
C32 |
C24 |
N25 |
119.5 |
119.6 |
C24 |
C32 |
F34 |
109.0 |
109.5 |
C24 |
C32 |
F33 |
109.6 |
109.5 |
F33 |
C32 |
F34 |
109.5 |
109.5 |
H8 |
C28 |
H9 |
109.5 |
109.5 |
H8 |
C28 |
H10 |
109.5 |
109.5 |
H9 |
C28 |
H10 |
109.5 |
109.5 |
H11 |
C30 |
H12 |
109.5 |
109.5 |
H11 |
C30 |
H13 |
109.5 |
109.5 |
H12 |
C30 |
H13 |
109.5 |
109.5 |
H14 |
C10 |
H15 |
109.5 |
110.5 |
H16 |
C31 |
H17 |
109.4 |
109.5 |
H16 |
C31 |
H18 |
109.5 |
109.5 |
H17 |
C31 |
H18 |
109.5 |
109.5 |
Torsion Angles for C81
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N8 |
C15 |
C28 |
H2 |
239.2 |
240.0 |
C28 |
C15 |
C16 |
N17 |
290.4 |
95.0 |
C16 |
C15 |
C28 |
H2 |
119.4 |
120.0 |
C28 |
C15 |
N8 |
H2 |
120.1 |
120.0 |
C16 |
C15 |
N8 |
H2 |
238.5 |
240.0 |
C28 |
C15 |
C16 |
H2 |
240.7 |
240.0 |
N8 |
C15 |
C16 |
H2 |
122.1 |
120.0 |
C21 |
C16 |
C15 |
N17 |
179.5 |
180.2 |
C15 |
C16 |
N17 |
C18 |
179.7 |
180.0 |
C15 |
C16 |
C21 |
C20 |
180.1 |
180.0 |
C15 |
C16 |
C21 |
H4 |
0.1 |
0.0 |
N1 |
C2 |
N3 |
C4 |
0.1 |
360.0 |
C2 |
N1 |
C6 |
H20 |
180.1 |
179.9 |
N3 |
C2 |
N1 |
C6 |
359.8 |
0.0 |
C2 |
N3 |
C4 |
N7 |
179.7 |
180.0 |
C6 |
N1 |
C2 |
N3 |
359.8 |
0.0 |
N1 |
C6 |
C5 |
H19 |
180.1 |
180.0 |
C5 |
C4 |
N3 |
N7 |
180.5 |
180.0 |
N3 |
C4 |
C5 |
H19 |
179.7 |
180.0 |
N3 |
C4 |
N7 |
C9 |
350.9 |
189.9 |
C2 |
N1 |
C6 |
C5 |
0.1 |
360.0 |
C6 |
C5 |
C4 |
N7 |
180.2 |
180.0 |
C4 |
C5 |
C6 |
H19 |
180.0 |
180.0 |
C15 |
C16 |
N17 |
C21 |
179.5 |
180.2 |
N17 |
C16 |
C15 |
H2 |
49.7 |
215.0 |
N17 |
C16 |
C21 |
C20 |
359.6 |
0.3 |
N17 |
C16 |
C21 |
H4 |
179.6 |
180.2 |
C16 |
N17 |
C18 |
H3 |
180.5 |
180.2 |
C15 |
C16 |
C21 |
N17 |
180.5 |
179.8 |
C21 |
C16 |
C15 |
H2 |
229.2 |
35.2 |
C21 |
C16 |
N17 |
C18 |
0.2 |
359.7 |
C16 |
C21 |
C20 |
C31 |
179.9 |
179.7 |
C2 |
N3 |
C4 |
C5 |
0.2 |
0.0 |
N3 |
C4 |
C5 |
N7 |
179.5 |
180.0 |
C6 |
C5 |
C4 |
H19 |
180.0 |
180.0 |
C5 |
C4 |
N7 |
C9 |
170.4 |
9.9 |
N7 |
C4 |
C5 |
H19 |
0.2 |
0.0 |
C4 |
N7 |
C9 |
H21 |
311.5 |
298.6 |
C4 |
N7 |
C12 |
O11 |
180.0 |
180.0 |
C4 |
N7 |
C12 |
O13 |
359.9 |
359.8 |
N7 |
C9 |
C10 |
O11 |
333.3 |
359.7 |
N7 |
C9 |
C10 |
H14 |
92.5 |
118.4 |
N7 |
C9 |
C10 |
H15 |
214.1 |
241.1 |
N7 |
C9 |
C14 |
F29 |
70.1 |
59.9 |
N7 |
C9 |
C14 |
H1 |
310.5 |
300.0 |
C9 |
N7 |
C12 |
O11 |
359.8 |
360.0 |
C9 |
N7 |
C12 |
O13 |
179.7 |
179.7 |
C10 |
C9 |
C14 |
F29 |
320.2 |
305.4 |
C10 |
C9 |
C14 |
H1 |
200.6 |
185.5 |
C12 |
O11 |
C10 |
C9 |
29.7 |
0.3 |
O11 |
C10 |
C9 |
H14 |
240.8 |
241.2 |
O11 |
C10 |
C9 |
H15 |
119.2 |
118.6 |
H14 |
C10 |
C9 |
H15 |
238.4 |
237.3 |
C30 |
C14 |
C9 |
F29 |
122.8 |
120.0 |
C30 |
C14 |
C9 |
H1 |
242.4 |
239.9 |
F29 |
C14 |
C9 |
H1 |
119.6 |
120.0 |
C19 |
C18 |
N17 |
H3 |
180.0 |
179.7 |
C9 |
C14 |
C30 |
F29 |
237.4 |
240.0 |
C9 |
C14 |
C30 |
H1 |
117.6 |
120.1 |
F29 |
C14 |
C30 |
H1 |
240.2 |
240.0 |
N7 |
C12 |
O11 |
C10 |
341.0 |
359.8 |
O11 |
C12 |
N7 |
O13 |
180.1 |
180.3 |
C9 |
C10 |
O11 |
H14 |
119.2 |
118.9 |
C9 |
C10 |
O11 |
H15 |
240.8 |
241.6 |
C10 |
O11 |
C12 |
O13 |
161.1 |
180.0 |
H14 |
C10 |
O11 |
H15 |
121.6 |
122.7 |
C20 |
C21 |
C16 |
N17 |
359.6 |
0.3 |
C16 |
C21 |
C20 |
H4 |
180.0 |
180.0 |
C21 |
C20 |
C19 |
C22 |
178.6 |
179.8 |
C21 |
C20 |
C31 |
H16 |
90.0 |
270.3 |
C21 |
C20 |
C31 |
H17 |
210.0 |
30.3 |
C21 |
C20 |
C31 |
H18 |
330.0 |
150.2 |
C9 |
C14 |
F29 |
H1 |
242.0 |
240.0 |
C30 |
C14 |
F29 |
H1 |
118.3 |
120.0 |
C9 |
C10 |
O11 |
C12 |
29.7 |
0.3 |
N7 |
C12 |
O11 |
O13 |
179.9 |
179.7 |
C12 |
O11 |
C10 |
H14 |
270.5 |
241.4 |
C12 |
O11 |
C10 |
H15 |
148.9 |
118.8 |
N7 |
C12 |
O13 |
O11 |
180.1 |
180.3 |
O13 |
C12 |
O11 |
C10 |
161.1 |
180.0 |
C16 |
N17 |
C18 |
C19 |
0.5 |
360.0 |
N17 |
C18 |
C19 |
H3 |
180.0 |
180.3 |
C20 |
C19 |
C18 |
C22 |
178.0 |
180.1 |
C18 |
C19 |
C22 |
C27 |
55.1 |
130.1 |
C18 |
C19 |
C22 |
C23 |
234.6 |
310.3 |
C16 |
C21 |
C20 |
C19 |
359.9 |
0.0 |
C18 |
C19 |
C20 |
C22 |
182.1 |
179.9 |
C20 |
C19 |
C18 |
H3 |
179.0 |
180.0 |
C20 |
C19 |
C22 |
C27 |
237.2 |
310.0 |
C20 |
C19 |
C22 |
C23 |
56.7 |
130.2 |
C31 |
C20 |
C19 |
C22 |
358.7 |
0.1 |
H16 |
C31 |
C20 |
H17 |
240.0 |
240.0 |
H16 |
C31 |
C20 |
H18 |
120.0 |
120.0 |
H17 |
C31 |
C20 |
H18 |
240.0 |
240.0 |
C22 |
C19 |
C18 |
H3 |
1.1 |
359.9 |
C23 |
C22 |
C19 |
C27 |
179.5 |
180.3 |
C19 |
C22 |
C27 |
C26 |
179.5 |
180.0 |
C19 |
C22 |
C27 |
H7 |
359.5 |
360.0 |
C19 |
C22 |
C23 |
C24 |
180.9 |
180.0 |
C19 |
C22 |
C23 |
H5 |
0.9 |
360.0 |
C19 |
C22 |
C27 |
C23 |
179.5 |
180.3 |
C27 |
C22 |
C23 |
C24 |
0.3 |
0.3 |
C27 |
C22 |
C23 |
H5 |
180.4 |
180.2 |
C22 |
C27 |
C26 |
N25 |
359.8 |
359.9 |
C22 |
C27 |
C26 |
H6 |
179.8 |
180.3 |
C19 |
C22 |
C23 |
C27 |
180.5 |
179.7 |
C23 |
C22 |
C27 |
C26 |
360.0 |
359.8 |
C23 |
C22 |
C27 |
H7 |
180.0 |
179.7 |
C22 |
C23 |
C24 |
N25 |
359.6 |
0.0 |
C22 |
C23 |
C24 |
C32 |
179.7 |
180.0 |
C24 |
C23 |
C22 |
H5 |
180.0 |
180.0 |
C22 |
C27 |
C26 |
H7 |
180.0 |
179.9 |
C24 |
N25 |
C26 |
C27 |
0.1 |
0.3 |
N25 |
C26 |
C27 |
H6 |
180.0 |
179.7 |
C24 |
C23 |
C22 |
C27 |
0.3 |
0.3 |
C22 |
C23 |
C24 |
H5 |
180.0 |
180.0 |
C23 |
C24 |
N25 |
C26 |
0.2 |
359.7 |
C32 |
C24 |
C23 |
N25 |
180.1 |
180.0 |
C23 |
C24 |
C32 |
F34 |
243.7 |
90.0 |
C23 |
C24 |
C32 |
F33 |
124.0 |
330.0 |
C27 |
C26 |
N25 |
H6 |
180.0 |
180.3 |
C32 |
C24 |
N25 |
C26 |
180.1 |
179.7 |
C27 |
C26 |
N25 |
C24 |
0.1 |
0.3 |
C23 |
C24 |
N25 |
C32 |
180.1 |
180.0 |
N25 |
C24 |
C23 |
H5 |
179.5 |
180.0 |
C24 |
N25 |
C26 |
H6 |
180.1 |
180.0 |
N25 |
C24 |
C32 |
F34 |
63.8 |
270.0 |
N25 |
C24 |
C32 |
F33 |
304.1 |
150.0 |
C23 |
C24 |
C32 |
N25 |
179.9 |
180.0 |
C32 |
C24 |
C23 |
H5 |
359.7 |
0.0 |
F33 |
C32 |
C24 |
F34 |
240.3 |
240.0 |
F35 |
C32 |
C24 |
N25 |
183.2 |
30.0 |
F34 |
C32 |
C24 |
N25 |
63.8 |
270.0 |
C24 |
C32 |
F34 |
F33 |
240.2 |
240.0 |
F33 |
C32 |
C24 |
N25 |
304.1 |
150.0 |
C24 |
C32 |
F33 |
F34 |
119.4 |
120.0 |
C9 |
C14 |
H1 |
F29 |
119.6 |
120.0 |
C30 |
C14 |
H1 |
F29 |
240.0 |
240.0 |
H2 |
C15 |
C16 |
N17 |
49.7 |
215.0 |
H2 |
C15 |
C16 |
C21 |
229.2 |
35.2 |
H3 |
C18 |
C19 |
C22 |
1.1 |
359.9 |
H4 |
C21 |
C16 |
N17 |
179.6 |
180.2 |
C16 |
C21 |
H4 |
C20 |
180.0 |
180.0 |
H4 |
C21 |
C20 |
C31 |
359.9 |
359.7 |
H5 |
C23 |
C22 |
C27 |
180.4 |
180.2 |
C22 |
C23 |
H5 |
C24 |
180.0 |
180.0 |
H5 |
C23 |
C24 |
N25 |
179.5 |
180.0 |
H5 |
C23 |
C24 |
C32 |
359.7 |
0.0 |
C27 |
C26 |
H6 |
N25 |
180.0 |
179.7 |
C22 |
C27 |
H7 |
C26 |
180.0 |
180.1 |
H7 |
C27 |
C26 |
N25 |
179.8 |
180.0 |
H7 |
C27 |
C26 |
H6 |
359.8 |
0.3 |
H8 |
C28 |
C15 |
H2 |
300.8 |
300.0 |
H9 |
C28 |
H8 |
H10 |
120.0 |
120.0 |
H9 |
C28 |
C15 |
H2 |
60.8 |
60.0 |
H8 |
C28 |
H9 |
H10 |
240.0 |
239.9 |
H10 |
C28 |
C15 |
H2 |
180.8 |
180.0 |
H8 |
C28 |
H10 |
H9 |
120.0 |
120.0 |
H11 |
C30 |
C14 |
F29 |
302.6 |
54.6 |
H11 |
C30 |
C14 |
H1 |
62.4 |
174.6 |
H12 |
C30 |
H11 |
H13 |
120.0 |
120.1 |
H12 |
C30 |
C14 |
F29 |
62.6 |
174.6 |
H12 |
C30 |
C14 |
H1 |
182.4 |
294.5 |
H11 |
C30 |
H12 |
H13 |
240.0 |
240.0 |
H13 |
C30 |
C14 |
F29 |
182.6 |
294.6 |
H13 |
C30 |
C14 |
H1 |
302.4 |
54.6 |
H11 |
C30 |
H13 |
H12 |
120.0 |
120.0 |
C9 |
C10 |
H14 |
O11 |
244.6 |
245.3 |
C9 |
C10 |
H14 |
H15 |
122.3 |
122.6 |
O11 |
C10 |
H14 |
H15 |
237.7 |
237.3 |
C9 |
C10 |
H15 |
O11 |
115.5 |
114.5 |
C9 |
C10 |
H15 |
H14 |
237.7 |
237.1 |
O11 |
C10 |
H15 |
H14 |
122.2 |
122.7 |
C20 |
C31 |
H16 |
H17 |
120.0 |
120.0 |
C20 |
C31 |
H16 |
H18 |
240.0 |
239.9 |
H17 |
C31 |
H16 |
H18 |
120.0 |
120.0 |
C20 |
C31 |
H17 |
H16 |
240.0 |
240.0 |
C20 |
C31 |
H17 |
H18 |
120.0 |
120.0 |
H16 |
C31 |
H17 |
H18 |
240.0 |
240.0 |
C20 |
C31 |
H18 |
H16 |
120.0 |
120.1 |
C20 |
C31 |
H18 |
H17 |
240.0 |
240.0 |
H16 |
C31 |
H18 |
H17 |
120.0 |
120.0 |
H19 |
C5 |
C4 |
N7 |
0.2 |
0.0 |
H20 |
C6 |
C5 |
H19 |
0.1 |
0.0 |
H21 |
C9 |
C10 |
O11 |
217.7 |
241.1 |
H21 |
C9 |
C10 |
H14 |
336.9 |
359.9 |
H21 |
C9 |
C10 |
H15 |
98.5 |
122.6 |
H21 |
C9 |
C14 |
F29 |
196.7 |
182.7 |
H21 |
C9 |
C14 |
H1 |
77.1 |
62.8 |
H22 |
N8 |
C15 |
H2 |
167.6 |
145.0 |