PDB Chemical Component C72
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for C72
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C02 |
C01 |
1.392 |
1.332 |
| C01 |
C05 |
1.432 |
1.450 |
| C01 |
H01 |
1.080 |
1.080 |
| C11 |
C02 |
1.481 |
1.479 |
| S03 |
C02 |
1.690 |
1.753 |
| S03 |
C04 |
1.714 |
1.756 |
| C04 |
C06 |
1.416 |
1.418 |
| C04 |
C05 |
1.391 |
1.397 |
| C05 |
C09 |
1.444 |
1.419 |
| C12 |
C06 |
1.455 |
1.471 |
| C06 |
C07 |
1.357 |
1.392 |
| C07 |
N08 |
1.311 |
1.319 |
| C07 |
H07 |
1.080 |
1.079 |
| C09 |
N08 |
1.357 |
1.320 |
| C09 |
N10 |
1.375 |
1.382 |
| N10 |
C13 |
1.470 |
1.465 |
| N10 |
HN10 |
1.000 |
0.970 |
| C19 |
C11 |
1.396 |
1.396 |
| C11 |
C23 |
1.394 |
1.396 |
| O26 |
C12 |
1.249 |
1.217 |
| C12 |
N25 |
1.394 |
1.348 |
| C13 |
C18 |
1.549 |
1.531 |
| C13 |
C14 |
1.560 |
1.530 |
| C13 |
H13 |
1.100 |
1.090 |
| C14 |
N15 |
1.500 |
1.469 |
| C14 |
H14 |
1.100 |
1.090 |
| C14 |
H14A |
1.100 |
1.090 |
| N15 |
C16 |
1.472 |
1.469 |
| N15 |
HN15 |
1.000 |
1.009 |
| C17 |
C16 |
1.539 |
1.531 |
| C16 |
H16 |
1.100 |
1.089 |
| C16 |
H16A |
1.100 |
1.090 |
| C18 |
C17 |
1.544 |
1.531 |
| C17 |
H17 |
1.100 |
1.090 |
| C17 |
H17A |
1.100 |
1.090 |
| C18 |
H18 |
1.100 |
1.090 |
| C18 |
H18A |
1.100 |
1.090 |
| C20 |
C19 |
1.389 |
1.379 |
| C19 |
H19 |
1.080 |
1.080 |
| C20 |
C21 |
1.392 |
1.385 |
| C20 |
H20 |
1.080 |
1.080 |
| CL24 |
C21 |
1.738 |
1.736 |
| C21 |
C22 |
1.386 |
1.384 |
| C22 |
C23 |
1.397 |
1.379 |
| C22 |
H22 |
1.080 |
1.081 |
| C23 |
H23 |
1.080 |
1.079 |
| N25 |
HN25 |
1.000 |
0.970 |
| N25 |
HN2A |
1.000 |
0.971 |
Bond Angles for C72
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C02 |
C01 |
C05 |
112.7 |
114.6 |
| C02 |
C01 |
H01 |
123.6 |
122.8 |
| C05 |
C01 |
H01 |
123.6 |
122.6 |
| C01 |
C05 |
C04 |
111.7 |
111.9 |
| C01 |
C05 |
C09 |
131.1 |
130.0 |
| S03 |
C04 |
C06 |
128.0 |
131.4 |
| S03 |
C04 |
C05 |
110.9 |
110.0 |
| C05 |
C04 |
C06 |
121.1 |
118.6 |
| C04 |
C06 |
C07 |
117.0 |
119.0 |
| C04 |
C05 |
C09 |
117.1 |
118.1 |
| C05 |
C09 |
N08 |
118.8 |
121.0 |
| C05 |
C09 |
N10 |
121.4 |
119.5 |
| C06 |
C07 |
N08 |
123.8 |
120.9 |
| C06 |
C07 |
H07 |
118.1 |
119.6 |
| N08 |
C07 |
H07 |
118.1 |
119.6 |
| C09 |
N10 |
C13 |
119.5 |
120.0 |
| C09 |
N10 |
HN10 |
106.2 |
120.0 |
| C13 |
N10 |
HN10 |
106.3 |
120.0 |
| N10 |
C13 |
C18 |
106.7 |
109.5 |
| N10 |
C13 |
C14 |
110.4 |
109.5 |
| N10 |
C13 |
H13 |
110.6 |
109.5 |
| C19 |
C11 |
C23 |
120.2 |
119.7 |
| C11 |
C23 |
C22 |
120.0 |
119.8 |
| C11 |
C23 |
H23 |
120.0 |
120.0 |
| C12 |
N25 |
HN25 |
120.0 |
120.1 |
| C12 |
N25 |
HN2A |
120.0 |
120.0 |
| C14 |
C13 |
C18 |
109.5 |
109.3 |
| C18 |
C13 |
H13 |
111.6 |
109.5 |
| C13 |
C18 |
C17 |
111.2 |
109.2 |
| C13 |
C18 |
H18 |
108.9 |
109.6 |
| C13 |
C18 |
H18A |
108.9 |
109.5 |
| C14 |
C13 |
H13 |
108.0 |
109.5 |
| C13 |
C14 |
N15 |
109.4 |
109.5 |
| C13 |
C14 |
H14 |
109.5 |
109.4 |
| C13 |
C14 |
H14A |
109.5 |
109.5 |
| N15 |
C14 |
H14 |
109.5 |
109.4 |
| N15 |
C14 |
H14A |
109.5 |
109.5 |
| C14 |
N15 |
C16 |
112.0 |
111.2 |
| C14 |
N15 |
HN15 |
108.6 |
111.0 |
| H14 |
C14 |
H14A |
109.4 |
109.5 |
| C16 |
N15 |
HN15 |
108.7 |
111.0 |
| N15 |
C16 |
H16 |
109.2 |
109.5 |
| N15 |
C16 |
H16A |
109.2 |
109.4 |
| C17 |
C16 |
H16 |
109.2 |
109.5 |
| C17 |
C16 |
H16A |
109.2 |
109.5 |
| H16 |
C16 |
H16A |
109.7 |
109.5 |
| C18 |
C17 |
H17 |
109.9 |
109.5 |
| C18 |
C17 |
H17A |
109.9 |
109.5 |
| H17 |
C17 |
H17A |
109.0 |
109.5 |
| H18 |
C18 |
H18A |
110.0 |
109.5 |
| C20 |
C19 |
H19 |
119.9 |
120.1 |
| C21 |
C20 |
H20 |
120.5 |
119.9 |
| C20 |
C21 |
C22 |
121.6 |
120.2 |
| C21 |
C22 |
C23 |
119.0 |
120.2 |
| C21 |
C22 |
H22 |
120.5 |
119.9 |
| C23 |
C22 |
H22 |
120.5 |
119.9 |
| C22 |
C23 |
H23 |
120.0 |
120.1 |
| HN25 |
N25 |
HN2A |
120.0 |
119.9 |
Torsion Angles for C72
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C05 |
C01 |
C02 |
H01 |
180.0 |
180.2 |
| C02 |
C01 |
C05 |
C04 |
0.1 |
0.0 |
| C02 |
C01 |
C05 |
C09 |
182.9 |
179.8 |
| C02 |
C01 |
C05 |
H01 |
180.0 |
179.8 |
| S03 |
C04 |
C05 |
C01 |
0.6 |
360.0 |
| C01 |
C05 |
C04 |
C06 |
181.5 |
179.9 |
| C04 |
C05 |
C01 |
C09 |
177.2 |
180.2 |
| C01 |
C05 |
C09 |
N08 |
181.8 |
179.9 |
| C01 |
C05 |
C09 |
N10 |
358.2 |
360.0 |
| C02 |
C01 |
H01 |
C05 |
180.0 |
180.2 |
| H01 |
C01 |
C05 |
C04 |
180.1 |
180.2 |
| H01 |
C01 |
C05 |
C09 |
2.9 |
360.0 |
| C11 |
C02 |
C01 |
H01 |
1.4 |
359.8 |
| S03 |
C02 |
C01 |
C05 |
359.2 |
360.0 |
| S03 |
C02 |
C01 |
H01 |
179.2 |
179.8 |
| C01 |
C05 |
C04 |
S03 |
0.6 |
360.0 |
| C05 |
C04 |
S03 |
C06 |
181.0 |
179.9 |
| S03 |
C04 |
C06 |
C07 |
179.3 |
179.9 |
| S03 |
C04 |
C05 |
C09 |
178.3 |
180.2 |
| S03 |
C04 |
C06 |
C05 |
181.1 |
179.9 |
| C06 |
C04 |
C05 |
C09 |
359.2 |
0.1 |
| C04 |
C06 |
C07 |
N08 |
0.6 |
360.0 |
| C04 |
C06 |
C07 |
H07 |
180.5 |
179.9 |
| C04 |
C05 |
C01 |
H01 |
180.1 |
180.2 |
| C01 |
C05 |
C04 |
C09 |
182.3 |
179.8 |
| S03 |
C04 |
C05 |
C06 |
179.1 |
180.1 |
| C05 |
C04 |
C06 |
C07 |
358.3 |
0.0 |
| C04 |
C05 |
C09 |
N08 |
4.7 |
359.7 |
| C04 |
C05 |
C09 |
N10 |
181.1 |
179.7 |
| C09 |
C05 |
C01 |
H01 |
2.9 |
360.0 |
| C01 |
C05 |
C09 |
C04 |
177.1 |
180.3 |
| C09 |
C05 |
C04 |
C06 |
359.2 |
0.1 |
| C05 |
C09 |
N10 |
C13 |
158.1 |
180.0 |
| C05 |
C09 |
N10 |
HN10 |
278.1 |
360.0 |
| C12 |
C06 |
C07 |
H07 |
359.3 |
0.0 |
| N08 |
C07 |
C06 |
H07 |
180.0 |
180.0 |
| C05 |
C09 |
N08 |
C07 |
353.9 |
0.3 |
| C06 |
C07 |
N08 |
H07 |
180.0 |
180.0 |
| C06 |
C07 |
H07 |
N08 |
180.0 |
180.0 |
| C05 |
C09 |
N08 |
N10 |
176.5 |
180.1 |
| C09 |
N08 |
C07 |
H07 |
183.5 |
179.9 |
| C05 |
C09 |
N10 |
N08 |
183.6 |
180.0 |
| C13 |
N10 |
C09 |
HN10 |
240.0 |
180.0 |
| C09 |
N10 |
C13 |
C18 |
164.5 |
155.0 |
| C09 |
N10 |
C13 |
C14 |
283.4 |
274.8 |
| C09 |
N10 |
C13 |
H13 |
42.9 |
34.9 |
| C09 |
N10 |
C13 |
HN10 |
120.0 |
180.0 |
| C14 |
C13 |
N10 |
C18 |
119.0 |
119.9 |
| C18 |
C13 |
N10 |
H13 |
121.6 |
120.1 |
| N10 |
C13 |
C18 |
C17 |
175.3 |
177.6 |
| N10 |
C13 |
C18 |
H18 |
295.4 |
297.6 |
| N10 |
C13 |
C18 |
H18A |
55.3 |
57.7 |
| C14 |
C13 |
N10 |
H13 |
240.5 |
239.9 |
| N10 |
C13 |
C14 |
N15 |
187.4 |
180.9 |
| N10 |
C13 |
C14 |
H14 |
307.4 |
300.8 |
| N10 |
C13 |
C14 |
H14A |
67.4 |
60.8 |
| C09 |
N10 |
HN10 |
C13 |
231.7 |
180.0 |
| HN10 |
N10 |
C13 |
C18 |
44.5 |
335.0 |
| HN10 |
N10 |
C13 |
C14 |
163.5 |
94.9 |
| HN10 |
N10 |
C13 |
H13 |
282.9 |
214.9 |
| C19 |
C11 |
C23 |
C22 |
359.3 |
359.5 |
| C19 |
C11 |
C23 |
H23 |
179.3 |
179.7 |
| C21 |
C22 |
C23 |
C11 |
1.1 |
0.6 |
| C11 |
C23 |
C22 |
H22 |
181.1 |
180.2 |
| C22 |
C23 |
C11 |
H23 |
180.0 |
179.8 |
| O26 |
C12 |
N25 |
HN25 |
360.0 |
180.1 |
| O26 |
C12 |
N25 |
HN2A |
180.0 |
359.9 |
| HN25 |
N25 |
C12 |
HN2A |
180.0 |
180.1 |
| C18 |
C13 |
N10 |
HN10 |
44.5 |
335.0 |
| N10 |
C13 |
C18 |
C14 |
119.6 |
119.9 |
| N10 |
C13 |
C18 |
H13 |
239.0 |
239.9 |
| C14 |
C13 |
C18 |
H13 |
119.5 |
119.9 |
| C18 |
C13 |
C14 |
N15 |
304.7 |
300.9 |
| C18 |
C13 |
C14 |
H14 |
64.7 |
60.8 |
| C18 |
C13 |
C14 |
H14A |
184.7 |
180.8 |
| C13 |
C18 |
C17 |
H17 |
182.8 |
182.4 |
| C13 |
C18 |
C17 |
H17A |
62.8 |
62.3 |
| H18 |
C18 |
C13 |
H18A |
240.0 |
239.9 |
| C14 |
C13 |
N10 |
HN10 |
163.5 |
94.9 |
| N10 |
C13 |
C14 |
C18 |
242.7 |
240.0 |
| N10 |
C13 |
C14 |
H13 |
121.1 |
120.1 |
| C18 |
C13 |
C14 |
H13 |
238.3 |
240.1 |
| C14 |
C13 |
C18 |
C17 |
55.8 |
57.6 |
| C14 |
C13 |
C18 |
H18 |
175.8 |
177.6 |
| C14 |
C13 |
C18 |
H18A |
295.8 |
297.7 |
| N15 |
C14 |
C13 |
H14 |
240.0 |
240.1 |
| N15 |
C14 |
C13 |
H14A |
120.0 |
120.0 |
| C13 |
C14 |
N15 |
C16 |
59.9 |
61.8 |
| C13 |
C14 |
N15 |
HN15 |
179.9 |
185.8 |
| H14 |
C14 |
C13 |
H14A |
240.0 |
240.0 |
| H13 |
C13 |
N10 |
HN10 |
282.9 |
214.9 |
| N10 |
C13 |
H13 |
C18 |
118.7 |
120.1 |
| N10 |
C13 |
H13 |
C14 |
239.1 |
240.0 |
| C14 |
C13 |
H13 |
C18 |
239.6 |
240.2 |
| H13 |
C13 |
C18 |
C17 |
296.3 |
297.7 |
| H13 |
C13 |
C18 |
H18 |
56.3 |
57.7 |
| H13 |
C13 |
C18 |
H18A |
176.3 |
177.8 |
| H13 |
C13 |
C14 |
N15 |
66.4 |
60.8 |
| H13 |
C13 |
C14 |
H14 |
186.4 |
180.7 |
| H13 |
C13 |
C14 |
H14A |
306.4 |
300.7 |
| N15 |
C14 |
C13 |
C18 |
304.7 |
300.9 |
| N15 |
C14 |
C13 |
H13 |
66.4 |
60.8 |
| C13 |
C14 |
N15 |
H14 |
120.0 |
120.0 |
| C13 |
C14 |
N15 |
H14A |
240.0 |
239.9 |
| H14 |
C14 |
N15 |
H14A |
120.0 |
120.0 |
| C16 |
N15 |
C14 |
HN15 |
240.0 |
236.0 |
| C14 |
N15 |
C16 |
H16 |
57.3 |
58.3 |
| C14 |
N15 |
C16 |
H16A |
177.3 |
178.3 |
| H14 |
C14 |
C13 |
C18 |
64.7 |
60.8 |
| H14 |
C14 |
C13 |
H13 |
186.4 |
180.7 |
| C13 |
C14 |
H14 |
N15 |
240.0 |
240.0 |
| C13 |
C14 |
H14 |
H14A |
120.0 |
120.0 |
| N15 |
C14 |
H14 |
H14A |
240.0 |
240.0 |
| H14 |
C14 |
N15 |
C16 |
299.8 |
301.8 |
| H14 |
C14 |
N15 |
HN15 |
59.8 |
65.8 |
| H14A |
C14 |
C13 |
C18 |
184.7 |
180.8 |
| H14A |
C14 |
C13 |
H13 |
306.4 |
300.7 |
| C13 |
C14 |
H14A |
N15 |
119.9 |
120.1 |
| C13 |
C14 |
H14A |
H14 |
239.9 |
240.0 |
| N15 |
C14 |
H14A |
H14 |
120.0 |
119.9 |
| H14A |
C14 |
N15 |
C16 |
179.9 |
181.8 |
| H14A |
C14 |
N15 |
HN15 |
299.9 |
305.9 |
| C16 |
N15 |
C14 |
H14 |
299.8 |
301.8 |
| C16 |
N15 |
C14 |
H14A |
179.9 |
181.8 |
| C14 |
N15 |
C16 |
HN15 |
120.0 |
124.1 |
| C17 |
C16 |
N15 |
H16 |
240.0 |
240.0 |
| C17 |
C16 |
N15 |
H16A |
120.0 |
120.0 |
| H16 |
C16 |
N15 |
H16A |
240.0 |
240.0 |
| HN15 |
N15 |
C14 |
H14 |
59.8 |
65.8 |
| HN15 |
N15 |
C14 |
H14A |
299.9 |
305.9 |
| C14 |
N15 |
HN15 |
C16 |
238.0 |
235.8 |
| HN15 |
N15 |
C16 |
H16 |
297.3 |
294.2 |
| HN15 |
N15 |
C16 |
H16A |
57.3 |
54.2 |
| C13 |
C18 |
C17 |
C16 |
302.8 |
302.4 |
| C17 |
C16 |
N15 |
HN15 |
177.2 |
174.2 |
| N15 |
C16 |
C17 |
H16 |
120.0 |
120.0 |
| N15 |
C16 |
C17 |
H16A |
240.0 |
240.1 |
| H16 |
C16 |
C17 |
H16A |
120.0 |
120.0 |
| H16 |
C16 |
N15 |
HN15 |
297.3 |
294.2 |
| N15 |
C16 |
H16 |
H16A |
119.7 |
120.0 |
| C17 |
C16 |
H16 |
H16A |
240.4 |
240.0 |
| H16A |
C16 |
N15 |
HN15 |
57.3 |
54.2 |
| N15 |
C16 |
H16A |
H16 |
240.3 |
240.0 |
| C17 |
C16 |
H16A |
H16 |
119.7 |
120.0 |
| C17 |
C18 |
C13 |
H13 |
296.3 |
297.7 |
| C13 |
C18 |
C17 |
H18 |
120.0 |
120.0 |
| C13 |
C18 |
C17 |
H18A |
240.0 |
240.1 |
| C18 |
C17 |
C16 |
H16 |
299.8 |
299.2 |
| C18 |
C17 |
C16 |
H16A |
179.8 |
179.1 |
| H17 |
C17 |
C18 |
H17A |
120.0 |
120.1 |
| H17 |
C17 |
C16 |
H16 |
59.8 |
59.1 |
| H17 |
C17 |
C16 |
H16A |
299.8 |
299.1 |
| C18 |
C17 |
H17 |
H17A |
239.5 |
239.9 |
| H17A |
C17 |
C16 |
H16 |
179.7 |
179.2 |
| H17A |
C17 |
C16 |
H16A |
59.8 |
59.2 |
| C18 |
C17 |
H17A |
H17 |
120.5 |
120.1 |
| H18 |
C18 |
C13 |
H13 |
56.3 |
57.7 |
| C13 |
C18 |
H18 |
C17 |
238.6 |
240.2 |
| C13 |
C18 |
H18 |
H18A |
119.3 |
120.1 |
| H18 |
C18 |
C17 |
H17 |
62.8 |
62.5 |
| H18 |
C18 |
C17 |
H17A |
302.8 |
302.3 |
| H18A |
C18 |
C13 |
H13 |
176.3 |
177.8 |
| C13 |
C18 |
H18A |
C17 |
121.4 |
119.7 |
| C13 |
C18 |
H18A |
H18 |
240.7 |
239.9 |
| H18A |
C18 |
C17 |
H17 |
302.8 |
302.3 |
| H18A |
C18 |
C17 |
H17A |
182.8 |
182.2 |
| C20 |
C19 |
C11 |
C23 |
0.3 |
0.2 |
| H19 |
C19 |
C11 |
C23 |
180.3 |
180.2 |
| C21 |
C20 |
C19 |
H19 |
179.7 |
180.0 |
| C20 |
C21 |
C22 |
C23 |
358.8 |
359.7 |
| C20 |
C21 |
C22 |
H22 |
178.8 |
180.0 |
| H20 |
C20 |
C19 |
H19 |
359.7 |
359.9 |
| H20 |
C20 |
C21 |
C22 |
180.8 |
180.1 |
| CL24 |
C21 |
C20 |
H20 |
359.7 |
0.0 |
| CL24 |
C21 |
C22 |
H22 |
359.9 |
0.1 |
| C11 |
C23 |
C22 |
C21 |
1.1 |
0.6 |
| C22 |
C21 |
C20 |
H20 |
180.8 |
180.1 |
| C23 |
C22 |
C21 |
H22 |
180.0 |
179.7 |
| C21 |
C22 |
C23 |
H23 |
181.1 |
180.3 |
| C11 |
C23 |
C22 |
H23 |
180.0 |
180.2 |
| C21 |
C22 |
C23 |
H22 |
180.0 |
180.3 |
| C21 |
C22 |
H22 |
C23 |
180.0 |
179.7 |
| H22 |
C22 |
C23 |
H23 |
1.1 |
360.0 |
| C11 |
C23 |
H23 |
C22 |
180.0 |
179.8 |
| H23 |
C23 |
C22 |
H22 |
1.1 |
360.0 |
| C12 |
N25 |
HN25 |
HN2A |
180.0 |
179.9 |
| C12 |
N25 |
HN2A |
HN25 |
180.0 |
180.1 |