PDB Chemical Component C6B

Ideal Model

Chemical Description

Name [(2S,3S,4R,5S)-5-(4-amino-2-oxo-pyrimidin-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate
Formula C9 H14 N3 O8 P
Formal charge 0
Molecular weight 323.197 g/mol
Component type NON-POLYMER

Chemical features

Atom count 35
Chiral atom count 4
Chiral atoms C3' C2' C4' C1'
Bond count 36
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 4-amino-1-(3-O-phosphono-beta-L-lyxofuranosyl)pyrimidin-2(1H)-one
Systematic name (OpenEye OEToolkits) [(2S,3S,4R,5S)-5-(4-amino-2-oxo-pyrimidin-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)N(C=C1)[C@H]2O[C@@H](CO)[C@@H](O[P](O)(O)=O)[C@H]2O
SMILES (CACTVS) NC1=NC(=O)N(C=C1)[CH]2O[CH](CO)[CH](O[P](O)(O)=O)[CH]2O
Stereo SMILES (OpenEye) C1=CN(C(=O)N=C1N)[C@@H]2[C@@H]([C@@H]([C@@H](O2)CO)OP(=O)(O)O)O
InChI descriptor InChI=1S/C9H14N3O8P/c10-5-1-2-12(9(15)11-5)8-6(14)7(4(3-13)19-8)20-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)/t4-,6+,7+,8-/m0/s1
InChIKey descriptor UOOOPKANIPLQPU-IHBLQFBFSA-N

Status Information

Last modified 2011-06-04
Created 2008-11-30
Release status REL
Model PDB code 3FBA
Processing site PDBJ