PDB Chemical Component C67
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for C67
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.501 |
1.469 |
| O03 |
C03 |
1.205 |
1.209 |
| C03 |
O02 |
1.312 |
1.342 |
| C03 |
C01 |
1.479 |
1.506 |
| C01 |
C02 |
1.536 |
1.530 |
| CA |
C |
1.540 |
1.507 |
| CA |
CB |
1.534 |
1.530 |
| CG |
CB |
1.525 |
1.530 |
| CG |
CD |
1.529 |
1.530 |
| C02 |
NH2 |
1.460 |
1.465 |
| C |
O |
1.219 |
1.208 |
| NE |
CD |
1.504 |
1.465 |
| NE |
CZ |
1.240 |
1.375 |
| NH2 |
CZ |
1.462 |
1.375 |
| CZ |
NH1 |
1.264 |
1.304 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CA |
HA |
1.100 |
1.090 |
| CB |
H6 |
1.100 |
1.091 |
| CB |
H7 |
1.100 |
1.090 |
| CG |
H8 |
1.100 |
1.091 |
| CG |
H9 |
1.100 |
1.090 |
| CD |
H10 |
1.100 |
1.090 |
| CD |
H11 |
1.101 |
1.090 |
| NE |
H12 |
1.000 |
0.971 |
| NH1 |
H13 |
1.000 |
0.970 |
| NH2 |
H14 |
1.000 |
0.970 |
| C01 |
H15 |
1.100 |
1.090 |
| C01 |
H16 |
1.100 |
1.090 |
| C02 |
H17 |
1.100 |
1.091 |
| C02 |
H18 |
1.100 |
1.090 |
| O02 |
H19 |
0.950 |
0.966 |
| C |
OXT |
1.326 |
1.343 |
| OXT |
HXT |
0.950 |
0.966 |
Bond Angles for C67
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N |
CA |
C |
109.3 |
109.5 |
| N |
CA |
CB |
114.1 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
110.9 |
| N |
CA |
HA |
108.6 |
109.5 |
| C03 |
O02 |
H19 |
109.5 |
117.1 |
| C03 |
C01 |
H15 |
108.0 |
109.5 |
| C03 |
C01 |
H16 |
108.0 |
109.4 |
| C02 |
C01 |
H15 |
108.0 |
109.5 |
| C02 |
C01 |
H16 |
108.0 |
109.5 |
| C01 |
C02 |
H17 |
109.4 |
109.5 |
| C01 |
C02 |
H18 |
109.5 |
109.5 |
| C |
CA |
CB |
108.5 |
109.5 |
| CA |
C |
O |
122.4 |
120.0 |
| C |
CA |
HA |
108.1 |
109.5 |
| CA |
C |
OXT |
115.6 |
120.0 |
| CB |
CA |
HA |
108.1 |
109.4 |
| CA |
CB |
H6 |
108.4 |
109.5 |
| CA |
CB |
H7 |
108.3 |
109.5 |
| CG |
CB |
H6 |
108.4 |
109.5 |
| CG |
CB |
H7 |
108.4 |
109.5 |
| CD |
CG |
H8 |
109.5 |
109.4 |
| CD |
CG |
H9 |
109.5 |
109.5 |
| CG |
CD |
H10 |
109.0 |
109.4 |
| CG |
CD |
H11 |
109.0 |
109.5 |
| C02 |
NH2 |
H14 |
119.6 |
120.0 |
| O |
C |
OXT |
122.0 |
120.0 |
| NE |
CD |
H10 |
109.0 |
109.5 |
| NE |
CD |
H11 |
109.0 |
109.5 |
| NE |
CZ |
NH1 |
120.1 |
119.9 |
| CZ |
NE |
H12 |
117.9 |
119.9 |
| CZ |
NH1 |
H13 |
112.0 |
120.0 |
| H |
N |
H2 |
109.5 |
111.0 |
| H6 |
CB |
H7 |
109.5 |
109.4 |
| H8 |
CG |
H9 |
109.5 |
109.5 |
| H10 |
CD |
H11 |
109.5 |
109.5 |
| H15 |
C01 |
H16 |
109.5 |
109.4 |
| H17 |
C02 |
H18 |
109.5 |
109.5 |
| C |
OXT |
HXT |
109.5 |
117.0 |
Torsion Angles for C67
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
N |
CB |
121.6 |
120.0 |
| N |
CA |
C |
O |
211.5 |
340.0 |
| C |
CA |
N |
HA |
242.3 |
239.9 |
| N |
CA |
C |
OXT |
32.0 |
160.0 |
| CB |
CA |
N |
HA |
120.7 |
119.9 |
| N |
CA |
CB |
H6 |
54.8 |
55.1 |
| N |
CA |
CB |
H7 |
173.6 |
175.0 |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| O03 |
C03 |
O02 |
H19 |
360.0 |
0.0 |
| O03 |
C03 |
C01 |
H15 |
327.0 |
240.0 |
| O03 |
C03 |
C01 |
H16 |
85.3 |
120.0 |
| O02 |
C03 |
C01 |
H15 |
147.0 |
60.0 |
| O02 |
C03 |
C01 |
H16 |
265.3 |
300.0 |
| C02 |
C01 |
C03 |
H15 |
239.1 |
120.0 |
| C02 |
C01 |
C03 |
H16 |
120.9 |
240.0 |
| C03 |
C01 |
C02 |
H17 |
237.3 |
60.0 |
| C03 |
C01 |
C02 |
H18 |
357.3 |
300.0 |
| H15 |
C01 |
C03 |
H16 |
241.7 |
120.0 |
| C03 |
C01 |
C02 |
H15 |
120.8 |
240.0 |
| C03 |
C01 |
C02 |
H16 |
239.1 |
120.0 |
| C01 |
C02 |
NH2 |
H14 |
307.3 |
0.0 |
| H15 |
C01 |
C02 |
H16 |
118.3 |
240.0 |
| H17 |
C02 |
C01 |
H18 |
240.0 |
120.1 |
| N |
CA |
C |
CB |
235.0 |
240.0 |
| C |
CA |
N |
H |
180.0 |
296.1 |
| C |
CA |
N |
H2 |
300.0 |
60.0 |
| N |
CA |
C |
HA |
118.0 |
120.0 |
| CB |
CA |
C |
HA |
243.0 |
240.0 |
| C |
CA |
CB |
H6 |
292.7 |
295.0 |
| C |
CA |
CB |
H7 |
51.5 |
55.0 |
| O |
C |
CA |
OXT |
179.5 |
180.0 |
| CA |
C |
OXT |
HXT |
179.5 |
180.1 |
| N |
CA |
CB |
C |
122.1 |
120.0 |
| CB |
CA |
N |
H |
58.3 |
176.1 |
| CB |
CA |
N |
H2 |
178.3 |
300.0 |
| N |
CA |
CB |
HA |
239.1 |
240.0 |
| CB |
CA |
C |
O |
336.4 |
100.0 |
| C |
CA |
CB |
HA |
117.0 |
120.0 |
| CB |
CA |
C |
OXT |
157.0 |
280.0 |
| CG |
CB |
CA |
H6 |
239.4 |
240.0 |
| CG |
CB |
CA |
H7 |
120.6 |
120.0 |
| H6 |
CB |
CA |
H7 |
241.3 |
240.1 |
| CG |
CB |
CA |
HA |
55.1 |
55.0 |
| CA |
CB |
CG |
H6 |
120.7 |
120.0 |
| CA |
CB |
CG |
H7 |
239.4 |
240.0 |
| H6 |
CB |
CG |
H7 |
118.7 |
119.9 |
| CD |
CG |
CB |
H6 |
76.4 |
60.0 |
| CD |
CG |
CB |
H7 |
317.7 |
300.1 |
| NE |
CD |
CG |
H10 |
239.7 |
240.0 |
| NE |
CD |
CG |
H11 |
120.3 |
120.0 |
| H8 |
CG |
CD |
H9 |
120.0 |
120.0 |
| H10 |
CD |
CG |
H11 |
240.6 |
240.0 |
| O |
C |
CA |
CB |
336.4 |
100.0 |
| O |
C |
CA |
HA |
93.5 |
220.0 |
| CA |
C |
O |
OXT |
180.5 |
180.0 |
| O |
C |
OXT |
HXT |
360.0 |
0.0 |
| NE |
CD |
CG |
H8 |
63.3 |
60.0 |
| NE |
CD |
CG |
H9 |
303.2 |
300.0 |
| CG |
CD |
NE |
H10 |
120.3 |
120.0 |
| CG |
CD |
NE |
H11 |
239.7 |
240.0 |
| H10 |
CD |
NE |
H11 |
119.4 |
120.0 |
| CZ |
NE |
CD |
H10 |
71.8 |
60.0 |
| CZ |
NE |
CD |
H11 |
312.4 |
300.0 |
| NE |
CZ |
NH1 |
H13 |
180.1 |
180.0 |
| NH2 |
CZ |
NE |
H12 |
0.0 |
359.9 |
| NH2 |
CZ |
NH1 |
H13 |
360.0 |
0.1 |
| NH1 |
CZ |
NE |
H12 |
179.9 |
180.0 |
| H |
N |
CA |
C |
180.0 |
296.1 |
| H |
N |
CA |
CB |
58.3 |
176.1 |
| CA |
N |
H |
H2 |
120.0 |
123.9 |
| H |
N |
CA |
HA |
297.7 |
56.1 |
| H2 |
N |
CA |
C |
300.0 |
60.0 |
| H2 |
N |
CA |
CB |
178.3 |
300.0 |
| CA |
N |
H2 |
H |
239.9 |
236.1 |
| H2 |
N |
CA |
HA |
57.7 |
180.0 |
| N |
CA |
HA |
C |
241.5 |
240.0 |
| N |
CA |
HA |
CB |
124.3 |
120.0 |
| HA |
CA |
N |
H |
297.7 |
56.1 |
| HA |
CA |
N |
H2 |
57.7 |
180.0 |
| C |
CA |
HA |
CB |
242.7 |
240.0 |
| HA |
CA |
C |
O |
93.5 |
220.0 |
| HA |
CA |
C |
OXT |
274.0 |
40.0 |
| HA |
CA |
CB |
H6 |
175.7 |
175.0 |
| HA |
CA |
CB |
H7 |
294.5 |
295.0 |
| H6 |
CB |
CA |
HA |
175.7 |
175.0 |
| CA |
CB |
H6 |
H7 |
118.0 |
120.0 |
| CG |
CB |
H6 |
H7 |
242.0 |
240.0 |
| H7 |
CB |
CA |
HA |
294.5 |
295.0 |
| CA |
CB |
H7 |
H6 |
242.0 |
240.0 |
| CG |
CB |
H7 |
H6 |
118.0 |
120.0 |
| H8 |
CG |
CB |
H6 |
196.4 |
180.0 |
| H8 |
CG |
CB |
H7 |
77.7 |
60.0 |
| CD |
CG |
H8 |
H9 |
240.0 |
240.0 |
| H8 |
CG |
CD |
H10 |
183.6 |
180.0 |
| H8 |
CG |
CD |
H11 |
303.0 |
300.0 |
| H9 |
CG |
CB |
H6 |
316.4 |
299.9 |
| H9 |
CG |
CB |
H7 |
197.7 |
180.0 |
| CD |
CG |
H9 |
H8 |
120.0 |
120.0 |
| H9 |
CG |
CD |
H10 |
63.6 |
60.0 |
| H9 |
CG |
CD |
H11 |
183.0 |
180.0 |
| H10 |
CD |
CG |
H8 |
183.6 |
180.0 |
| H10 |
CD |
CG |
H9 |
63.6 |
60.0 |
| CG |
CD |
H10 |
H11 |
119.1 |
120.0 |
| NE |
CD |
H10 |
H11 |
240.9 |
240.0 |
| H11 |
CD |
CG |
H8 |
303.0 |
300.0 |
| H11 |
CD |
CG |
H9 |
183.0 |
180.0 |
| CG |
CD |
H11 |
H10 |
240.9 |
240.0 |
| NE |
CD |
H11 |
H10 |
119.1 |
120.0 |
| H12 |
NE |
CD |
H10 |
251.8 |
240.0 |
| H12 |
NE |
CD |
H11 |
132.4 |
120.0 |
| H12 |
NE |
CZ |
NH1 |
179.9 |
180.0 |
| C03 |
C01 |
H15 |
H16 |
117.4 |
240.0 |
| C02 |
C01 |
H15 |
H16 |
242.7 |
120.0 |
| H15 |
C01 |
C02 |
H17 |
116.5 |
180.1 |
| H15 |
C01 |
C02 |
H18 |
236.5 |
60.0 |
| C03 |
C01 |
H16 |
H15 |
242.7 |
120.0 |
| C02 |
C01 |
H16 |
H15 |
117.3 |
240.0 |
| H16 |
C01 |
C02 |
H17 |
358.2 |
300.1 |
| H16 |
C01 |
C02 |
H18 |
118.2 |
180.0 |
| H17 |
C02 |
C01 |
H15 |
116.5 |
180.1 |
| H17 |
C02 |
C01 |
H16 |
358.2 |
300.1 |
| C01 |
C02 |
H17 |
H18 |
120.0 |
239.9 |
| H17 |
C02 |
NH2 |
H14 |
187.3 |
120.0 |
| H18 |
C02 |
C01 |
H15 |
236.5 |
60.0 |
| H18 |
C02 |
C01 |
H16 |
118.2 |
180.0 |
| C01 |
C02 |
H18 |
H17 |
240.0 |
120.0 |
| H18 |
C02 |
NH2 |
H14 |
67.3 |
240.0 |
| OXT |
C |
CA |
CB |
157.0 |
280.0 |
| CA |
C |
OXT |
O |
179.5 |
180.0 |
| OXT |
C |
CA |
HA |
274.0 |
40.0 |