PDB Chemical Component C62

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for C62

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
S2 O4 1.489 1.420
O3 S2 1.499 1.421
S2 N6 1.641 1.656
S2 C16 1.776 1.762
C16 C15 1.407 1.384
C14 C15 1.402 1.380
C13 C14 1.390 1.397
C18 C13 1.399 1.397
C17 C18 1.389 1.380
C16 C17 1.386 1.384
C13 C4 1.459 1.476
C4 O2 1.357 1.346
C4 C3 1.356 1.366
C3 C2 1.351 1.397
O2 C1 1.298 1.349
C2 C1 1.373 1.384
C1 C6 1.452 1.411
C6 C7 1.415 1.366
C7 S1 1.694 1.775
S1 C9 1.659 1.773
C9 N2 1.364 1.341
C7 C8 1.387 1.418
N2 C8 1.369 1.321
C8 O1 1.232 1.218
C9 O5 1.233 1.217
N6 H6N1 1.000 0.970
N6 H6N2 1.000 0.970
C17 H17 1.080 1.079
C15 H15 1.080 1.080
C18 H18 1.080 1.080
C14 H14 1.080 1.080
C3 H3 1.080 1.081
C2 H2 1.080 1.080
C6 H6C1 1.080 1.080
N2 HA 1.000 0.970

Bond Angles for C62

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O3 S2 N6 109.4 106.4
O3 S2 C16 109.6 106.4
N6 S2 C16 110.0 107.2
S2 N6 H6N1 109.5 120.1
S2 N6 H6N2 109.4 120.0
S2 C16 C15 120.3 119.8
S2 C16 C17 119.8 119.8
C15 C16 C17 119.9 120.3
C16 C15 H15 120.0 120.0
C14 C15 H15 120.0 119.9
C13 C14 H14 120.2 120.1
C18 C13 C4 119.0 120.2
C16 C17 C18 120.0 120.1
C17 C18 H18 119.8 120.0
C16 C17 H17 120.0 119.9
C13 C4 O2 125.0 125.6
C13 C4 C3 127.2 125.6
O2 C4 C3 107.8 108.7
C4 O2 C1 109.3 109.4
C4 C3 C2 107.0 107.2
C4 C3 H3 126.5 126.4
C3 C2 C1 107.7 106.7
C2 C3 H3 126.5 126.4
C3 C2 H2 126.1 126.6
O2 C1 C2 108.3 108.0
O2 C1 C6 125.4 126.0
C2 C1 C6 126.3 126.0
C1 C2 H2 126.1 126.7
C1 C6 C7 120.5 120.0
C1 C6 H6C1 119.7 120.0
C6 C7 S1 125.2 127.8
C6 C7 C8 124.0 127.8
C7 C6 H6C1 119.7 120.0
C7 S1 C9 92.2 94.3
S1 C7 C8 110.8 104.4
S1 C9 N2 112.2 106.0
S1 C9 O5 123.9 127.0
C9 N2 C8 113.1 119.0
N2 C9 O5 124.0 127.0
C9 N2 HA 123.4 120.5
C7 C8 N2 111.6 116.2
C7 C8 O1 124.2 121.9
N2 C8 O1 124.2 121.9
C8 N2 HA 123.4 120.5
H6N1 N6 H6N2 109.5 119.9

Torsion Angles for C62

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N6 S2 O3 C16 120.7 114.1
O3 S2 N6 H6N1 168.7 246.4
O3 S2 N6 H6N2 288.7 66.5
O3 S2 C16 C15 324.3 203.5
O3 S2 C16 C17 146.8 23.2
O3 S2 N6 C16 239.5 246.5
N6 S2 C16 C15 204.0 90.0
N6 S2 C16 C17 26.5 269.7
H6N1 N6 S2 H6N2 240.0 179.9
O3 S2 C16 N6 120.3 113.5
C16 S2 N6 H6N1 289.2 360.0
C16 S2 N6 H6N2 49.2 180.0
C15 C16 S2 C17 177.6 180.3
S2 C16 C15 H15 1.3 360.0
S2 C16 C17 C18 178.6 179.8
S2 C16 C17 H17 358.6 360.0
S2 C16 C15 C17 182.4 179.7
C14 C15 C16 H15 180.0 180.0
C15 C16 C17 C18 1.0 359.5
C15 C16 C17 H17 181.1 179.7
C14 C15 C16 C17 358.9 0.3
C16 C15 C14 H15 180.0 180.0
C13 C14 C15 H15 180.1 180.0
C18 C13 C14 H14 181.0 180.0
C16 C17 C18 C13 0.0 0.5
C18 C13 C4 O2 346.7 180.0
C18 C13 C4 C3 164.3 359.7
C17 C18 C13 C4 179.7 179.8
C16 C17 C18 H17 180.0 180.2
S2 C16 C17 C15 177.6 180.3
C17 C16 C15 H15 178.9 180.3
C16 C17 C18 H18 180.0 180.3
C4 C13 C14 H14 0.2 0.0
O2 C4 C13 C3 182.4 180.3
C13 C4 O2 C1 177.7 180.0
C13 C4 C3 C2 181.9 180.0
C13 C4 C3 H3 1.9 360.0
C13 C4 O2 C3 178.0 179.7
O2 C4 C3 C2 359.9 359.7
O2 C4 C3 H3 179.9 179.7
C4 O2 C1 C2 0.7 359.8
C4 O2 C1 C6 180.4 180.0
C13 C4 C3 O2 182.1 180.3
C3 C4 O2 C1 359.7 0.3
C4 C3 C2 C1 0.5 0.2
C2 C3 C4 H3 180.0 180.1
C4 C3 C2 H2 180.5 180.0
C4 C3 C2 H3 180.0 179.9
O2 C1 C2 C3 359.3 0.0
C3 C2 C1 C6 179.5 179.9
C1 C2 C3 H2 180.0 180.1
C1 O2 C4 C3 359.7 0.3
C3 C2 C1 O2 359.3 0.0
C2 C1 O2 C6 180.3 179.9
O2 C1 C2 H2 179.3 180.1
O2 C1 C6 C7 19.9 0.0
O2 C1 C6 H6C1 200.0 180.1
C1 C2 C3 H3 180.5 180.2
C3 C2 C1 H2 180.0 179.9
O2 C1 C2 C6 179.7 180.1
C2 C1 C6 C7 199.6 180.2
C2 C1 C6 H6C1 19.7 0.2
O2 C1 C6 C2 180.3 179.8
C6 C1 C2 H2 359.5 0.0
C1 C6 C7 S1 10.8 0.0
C1 C6 C7 C8 189.9 179.7
C7 C6 C1 H6C1 180.0 180.0
C1 C6 C7 H6C1 180.0 180.0
C6 C7 S1 C9 179.4 180.0
S1 C7 C6 C8 180.9 180.3
C6 C7 C8 N2 180.8 179.8
C6 C7 C8 O1 1.2 360.0
C6 C7 S1 C8 179.2 179.8
S1 C7 C6 H6C1 190.8 180.0
C7 S1 C9 N2 359.6 0.0
C7 S1 C9 O5 179.9 180.0
S1 C7 C8 N2 360.0 359.6
S1 C7 C8 O1 180.4 179.7
C9 S1 C7 C8 0.2 0.2
S1 C9 N2 C8 0.5 359.7
N2 C9 S1 O5 179.7 180.0
S1 C9 N2 HA 180.5 180.0
S1 C9 N2 O5 180.3 180.0
C7 C8 N2 C9 359.7 0.5
C9 N2 C8 O1 179.3 180.3
C8 N2 C9 HA 180.0 179.7
C6 C7 C8 S1 180.8 180.2
C8 C7 C6 H6C1 9.9 359.7
C8 C7 S1 C9 0.2 0.2
C9 N2 C8 C7 359.7 0.5
N2 C8 C7 O1 179.6 179.9
C7 C8 N2 HA 179.7 180.2
C8 N2 C9 O5 180.1 179.7
C9 N2 C8 HA 180.0 180.3
C7 C8 N2 O1 180.4 180.1
C7 C8 O1 N2 179.6 179.9
O1 C8 N2 HA 359.3 0.1
S1 C9 O5 N2 179.6 180.0
O5 C9 N2 C8 180.1 179.7
O5 C9 N2 HA 0.1 360.0
H6N1 N6 S2 C16 289.2 360.0
S2 N6 H6N1 H6N2 120.0 180.1
H6N2 N6 S2 C16 49.2 180.0
S2 N6 H6N2 H6N1 240.0 179.9
C16 C17 H17 C18 180.0 179.8
H17 C17 C18 H18 0.0 0.1
H15 C15 C16 C17 178.9 180.3
H18 C18 C13 C4 359.7 0.0
H14 C14 C15 H15 0.1 359.9
C4 C3 H3 C2 180.0 180.1
H3 C3 C2 C1 180.5 180.2
H3 C3 C2 H2 0.5 0.1
C3 C2 H2 C1 180.0 180.2
H2 C2 C3 H3 0.5 0.1
H2 C2 C1 C6 359.5 0.0
C1 C6 H6C1 C7 180.0 180.0
H6C1 C6 C7 S1 190.8 180.0
H6C1 C6 C7 C8 9.9 359.7
C9 N2 HA C8 180.0 179.7
HA N2 C9 O5 0.1 360.0
HA N2 C8 O1 359.3 0.1