Atom Nomenclature for C60

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for C60

Atom Name (V3) Atom Name (V2)
CS1 CS1
CS2 CS2
CS3 CS3
CS4 CS4
SS SS
OS1 OS1
OS2 OS2
CNF CNF
CAF CAF
CBF CBF
C1F C1F
C2F C2F
C3F C3F
C4F C4F
C5F C5F
C6F C6F
CF CF
OF OF
NH NH
CAH CAH
CBH CBH
C1H C1H
N1H N1H
C2H C2H
N2H N2H
C3H C3H
CH CH
OH OH
NC NC
CAC CAC
CBC CBC
C1C C1C
C2C C2C
C3C C3C
C4C C4C
C5C C5C
C6C C6C
CC CC
OC OC
CNV CNV
CAV CAV
CBV CBV
C1V C1V
C2V C2V
CV CV
OV OV
NT NT
C1T C1T
C2T C2T
C3T C3T
C4T C4T
HS21 HS21
HS22 HS22
HS23 HS23
HS31 HS31
HS32 HS32
HS33 HS33
HS41 HS41
HS42 HS42
HS43 HS43
HNF1 HNF1
HNF2 HNF2
HAF HAF
HBF1 HBF1
HBF2 HBF2
H2F H2F
H3F H3F
H4F H4F
H5F H5F
H6F H6F
HNH HNH
HAH HAH
HBH1 HBH1
HBH2 HBH2
HNH1 HNH1
H2H H2H
H3H H3H
HNC HNC
HAC HAC
HBC1 HBC1
HBC2 HBC2
H1C H1C
H2C1 H2C1
H2C2 H2C2
H3C1 H3C1
H3C2 H3C2
H4C1 H4C1
H4C2 H4C2
H5C1 H5C1
H5C2 H5C2
H6C1 H6C1
H6C2 H6C2
HNV1 HNV1
HNV2 HNV2
HAV HAV
HBV HBV
H1V1 H1V1
H1V2 H1V2
H1V3 H1V3
H2V1 H2V1
H2V2 H2V2
H2V3 H2V3
HNT HNT
H1T1 H1T1
H1T2 H1T2
H2T1 H2T1
H2T2 H2T2
H3T1 H3T1
H3T2 H3T2
H4T1 H4T1
H4T2 H4T2
H4T3 H4T3
H62 H62
H63 H63